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The map label for this gene is glxA [H]

Identifier: 170750830

GI number: 170750830

Start: 4723776

End: 4724732

Strand: Direct

Name: glxA [H]

Synonym: Mrad2831_4441

Alternate gene names: 170750830

Gene position: 4723776-4724732 (Clockwise)

Preceding gene: 170750829

Following gene: 170750831

Centisome position: 77.72

GC content: 74.92

Gene sequence:

>957_bases
ATGGCTGTCGTGCGGCGGATCGGCCTCGTGGTCTGTCCCGATTTCGATTTCATGGCCCTGGCGGTGACCTCGCCGTTCGT
GCTGGCCAACAAGTACGCGGGGGCGGCACTCTACGACGTCCGCGTGCTCGCCGAGCAGGGCGGCCGGGTCCGCGCGGGCC
TGGGCCCCGACATCGCCACCGAGCCCCTGGGCGCGCCGGACGCCTTCGACACGATCCTGGTCGCGGCCGGGATCGGGCTC
CCGGAGACCACGCCGGGCCTCGCCGGCTACCTCCGGGCGGCGGCCCGGGCGACCCGGCGGGTCGCGGGGCTGTGCCTGGG
CGCGTTCGTCCTGGCCGATGCCGGCCTGCTCGACGGGCGCCGCGCCACGACCCACTGGCACTTCGCGGCGCAGTTCCGCG
AGCGCTATCCCGCGGCCCGGCTGGACATCGACAAGATCTACATTGCCGACGACAACATCTGGACCTCGGCCGGCATGTCG
GCGGCGATCGACCTCGCGGTGGGCATGGTGGAGCGCGACCACGGCCGCGACCTCGCCCACCGCGTCGCCCATGGCCTGGT
GATGGAGCGCCGCCGGGCCGGCGGCCAGGCGCAGCACTCGGCGCTGCTCGAGGTGGATGCGCGCACGGACCGGATCCAGA
GCGTCCTCGCCCACGCCCGCCGCAACCTGCGGCGGCCGCTCACCACCGAGGACCTCGCCGCCGTGGCCTGCCTCAGCCCG
CGCCAGTTCACCCGGCTGTTCCGGGCCGAGACCGGCGTCTCGCCCGCCAAGGCCATCGAGACGATCCGCGTCGAGGCCGC
GAAGCTGATGCTGGAGGAGAGCCGCCTGCCCATCGAGGAGATCGCCCAGGAGGCGGGCTTCGCCAACCGCGAGCGGATGC
GCCGCGCGTTCCTCCGGGTCCACGGCGCGGTGCCGCGGACGATCCGCCGGGCGGCCGGGCCGCTCGCGGTCGCCTGA

Upstream 100 bases:

>100_bases
GGAGCGGTTCCGGACGCGGATGCCTCCTTTCCGGCCACGACTCTTGTGCCGGCCCGGCCGGGGCCTGATGTTGGCCGCCG
GCGAAGCGGAGCGGTGGTCC

Downstream 100 bases:

>100_bases
TCGCGCGGACATGGCCGGAAACGTGGCTTTTTTGACGTAGGCCGATCCCGGGGGACGACCGTAAGCATGGCCGGGGGCTC
AGCCGATCCTCGGAGAAACG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAVVRRIGLVVCPDFDFMALAVTSPFVLANKYAGAALYDVRVLAEQGGRVRAGLGPDIATEPLGAPDAFDTILVAAGIGL
PETTPGLAGYLRAAARATRRVAGLCLGAFVLADAGLLDGRRATTHWHFAAQFRERYPAARLDIDKIYIADDNIWTSAGMS
AAIDLAVGMVERDHGRDLAHRVAHGLVMERRRAGGQAQHSALLEVDARTDRIQSVLAHARRNLRRPLTTEDLAAVACLSP
RQFTRLFRAETGVSPAKAIETIRVEAAKLMLEESRLPIEEIAQEAGFANRERMRRAFLRVHGAVPRTIRRAAGPLAVA

Sequences:

>Translated_318_residues
MAVVRRIGLVVCPDFDFMALAVTSPFVLANKYAGAALYDVRVLAEQGGRVRAGLGPDIATEPLGAPDAFDTILVAAGIGL
PETTPGLAGYLRAAARATRRVAGLCLGAFVLADAGLLDGRRATTHWHFAAQFRERYPAARLDIDKIYIADDNIWTSAGMS
AAIDLAVGMVERDHGRDLAHRVAHGLVMERRRAGGQAQHSALLEVDARTDRIQSVLAHARRNLRRPLTTEDLAAVACLSP
RQFTRLFRAETGVSPAKAIETIRVEAAKLMLEESRLPIEEIAQEAGFANRERMRRAFLRVHGAVPRTIRRAAGPLAVA
>Mature_317_residues
AVVRRIGLVVCPDFDFMALAVTSPFVLANKYAGAALYDVRVLAEQGGRVRAGLGPDIATEPLGAPDAFDTILVAAGIGLP
ETTPGLAGYLRAAARATRRVAGLCLGAFVLADAGLLDGRRATTHWHFAAQFRERYPAARLDIDKIYIADDNIWTSAGMSA
AIDLAVGMVERDHGRDLAHRVAHGLVMERRRAGGQAQHSALLEVDARTDRIQSVLAHARRNLRRPLTTEDLAAVACLSPR
QFTRLFRAETGVSPAKAIETIRVEAAKLMLEESRLPIEEIAQEAGFANRERMRRAFLRVHGAVPRTIRRAAGPLAVA

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34408; Mature: 34277

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVRRIGLVVCPDFDFMALAVTSPFVLANKYAGAALYDVRVLAEQGGRVRAGLGPDIAT
CCHHHHCCEEECCCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
EPLGAPDAFDTILVAAGIGLPETTPGLAGYLRAAARATRRVAGLCLGAFVLADAGLLDGR
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RATTHWHFAAQFRERYPAARLDIDKIYIADDNIWTSAGMSAAIDLAVGMVERDHGRDLAH
CCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCHHHHH
RVAHGLVMERRRAGGQAQHSALLEVDARTDRIQSVLAHARRNLRRPLTTEDLAAVACLSP
HHHHHHHHHHHHCCCCHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH
RQFTRLFRAETGVSPAKAIETIRVEAAKLMLEESRLPIEEIAQEAGFANRERMRRAFLRV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
HGAVPRTIRRAAGPLAVA
HCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVVRRIGLVVCPDFDFMALAVTSPFVLANKYAGAALYDVRVLAEQGGRVRAGLGPDIAT
CHHHHCCEEECCCCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCC
EPLGAPDAFDTILVAAGIGLPETTPGLAGYLRAAARATRRVAGLCLGAFVLADAGLLDGR
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RATTHWHFAAQFRERYPAARLDIDKIYIADDNIWTSAGMSAAIDLAVGMVERDHGRDLAH
CCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHCCCCHHHHH
RVAHGLVMERRRAGGQAQHSALLEVDARTDRIQSVLAHARRNLRRPLTTEDLAAVACLSP
HHHHHHHHHHHHCCCCHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCH
RQFTRLFRAETGVSPAKAIETIRVEAAKLMLEESRLPIEEIAQEAGFANRERMRRAFLRV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
HGAVPRTIRRAAGPLAVA
HCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]