| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yceI [C]
Identifier: 170750791
GI number: 170750791
Start: 4667989
End: 4668561
Strand: Direct
Name: yceI [C]
Synonym: Mrad2831_4402
Alternate gene names: 170750791
Gene position: 4667989-4668561 (Clockwise)
Preceding gene: 170750790
Following gene: 170750795
Centisome position: 76.8
GC content: 74.17
Gene sequence:
>573_bases ATGAACGCGCGTCACCTCTGCCTGCTGGCAGCTCTCCAGGCCGCCACCCTGCCGGCGGCGGCCGCCGAGTGGGCGGTCGA TCCGGGCAAGAGCGCCATCCGGTTCTCCGGCGTGCAGGTCGGCGTGCCTTTCACCGGGCGGTTCGAGCGGTTCAAGGCCG ACATCGATCTCGACCCCGCCAAGCCCGAGGCGGGGCACGCGCTCGTGCTGGTCGACCTCGCCAGCGCCCGGACCGGCGAC GTCCAGCGCGACGAGGCCCTGCCGCAGAAGGACTGGTTCGACGTCAAGGCGGGGAGCGAGGCGCGCTTCGAGGCGACCCG CTTCGTCGACAAGGGGCAGGGCGACTACGCGGCGATCGGGACGCTGACGATCCGCGGCACGAGCCGGCCCGTGACGCTGC CGTTCCACCTGACCCTGGCGGGCGACACCGCGCGCGCCGCGGGGCGCGTCGGCCTCGTCCGCACCGAGTTCGGGGTCGGG CAGGGGGCCTGGGCCTCGGGCCAGTGGGTGGCGCTCGACGTCGGAGTCGAGGTCGACATCGTCGCGACGGCGCGGCCGGC AGTCGGACACTGA
Upstream 100 bases:
>100_bases CGGCGGCCCTGCGCCACCACCTCCTCCTGCGCGACGACGTGCTGCGCCGCATGCTGCCGGGGCGCAGCACGTCGATCACC CCGACCGTGGAGCCGACCCG
Downstream 100 bases:
>100_bases CGCGGGCCGCGCGCGGCGACAGGCGGACGGTCCGAATCCCGCGGGCGCCCGGACTCGTCCCGGCGCGCCCTTTACCCCGG CCGGTCCTCCGAGCCGGTCC
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNARHLCLLAALQAATLPAAAAEWAVDPGKSAIRFSGVQVGVPFTGRFERFKADIDLDPAKPEAGHALVLVDLASARTGD VQRDEALPQKDWFDVKAGSEARFEATRFVDKGQGDYAAIGTLTIRGTSRPVTLPFHLTLAGDTARAAGRVGLVRTEFGVG QGAWASGQWVALDVGVEVDIVATARPAVGH
Sequences:
>Translated_190_residues MNARHLCLLAALQAATLPAAAAEWAVDPGKSAIRFSGVQVGVPFTGRFERFKADIDLDPAKPEAGHALVLVDLASARTGD VQRDEALPQKDWFDVKAGSEARFEATRFVDKGQGDYAAIGTLTIRGTSRPVTLPFHLTLAGDTARAAGRVGLVRTEFGVG QGAWASGQWVALDVGVEVDIVATARPAVGH >Mature_190_residues MNARHLCLLAALQAATLPAAAAEWAVDPGKSAIRFSGVQVGVPFTGRFERFKADIDLDPAKPEAGHALVLVDLASARTGD VQRDEALPQKDWFDVKAGSEARFEATRFVDKGQGDYAAIGTLTIRGTSRPVTLPFHLTLAGDTARAAGRVGLVRTEFGVG QGAWASGQWVALDVGVEVDIVATARPAVGH
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20001; Mature: 20001
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARHLCLLAALQAATLPAAAAEWAVDPGKSAIRFSGVQVGVPFTGRFERFKADIDLDPA CCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCC KPEAGHALVLVDLASARTGDVQRDEALPQKDWFDVKAGSEARFEATRFVDKGQGDYAAIG CCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCCCEEEEEHEECCCCCEEEEE TLTIRGTSRPVTLPFHLTLAGDTARAAGRVGLVRTEFGVGQGAWASGQWVALDVGVEVDI EEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCEEEE VATARPAVGH EEECCCCCCC >Mature Secondary Structure MNARHLCLLAALQAATLPAAAAEWAVDPGKSAIRFSGVQVGVPFTGRFERFKADIDLDPA CCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCC KPEAGHALVLVDLASARTGDVQRDEALPQKDWFDVKAGSEARFEATRFVDKGQGDYAAIG CCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCCCEEEEEHEECCCCCEEEEE TLTIRGTSRPVTLPFHLTLAGDTARAAGRVGLVRTEFGVGQGAWASGQWVALDVGVEVDI EEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCEEEE VATARPAVGH EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]