Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 170750790

GI number: 170750790

Start: 4667387

End: 4667992

Strand: Direct

Name: yceJ [H]

Synonym: Mrad2831_4401

Alternate gene names: 170750790

Gene position: 4667387-4667992 (Clockwise)

Preceding gene: 170750789

Following gene: 170750791

Centisome position: 76.79

GC content: 74.42

Gene sequence:

>606_bases
ATGGCGAACGGGGTCTCCGCGCGGCGGTACTCCGCCGTGGCGATCCTGCTGCACTGGGCGAGCGCGCTGGGCGTGCTCGT
CCTGATCGGTCTGGGCCTGACCATGACCCATGCGGGGTTGGCGCCGCTGCGCCAGTTCCAGCTCTACCAGTGGCACAAGT
CGGTCGGGATCACCGTGCTGGCGCTGACCGCCCTGCGCGTCCTCTGGCGCCTGACCCACCGGCCGCCGCCGCACCCGGCC
GGGATGCCGGCTCGGGAGCGCCGGGCCGCCGCGGCGGCCCATCACCTCCTGTACCTGCTCCTCGTCGGGCTGCCCCTGAC
CGGCTGGGCCGTGGTGTCGCTGTCGCCGTTCAACATCCCGACGGTGCTCTACGGGATCGTGCCCTGGCCGCACCTGCCGC
TGGCGGGCCTCGCCCCCGACCCCGCCGCCGCCGAGGGCGTCCTGAAGCGGGTCCACGCCCTGGGGGCGTGGTTCCTGGCG
GCTCTGCTCGCAATCCACGTGGCGGCGGCCCTGCGCCACCACCTCCTCCTGCGCGACGACGTGCTGCGCCGCATGCTGCC
GGGGCGCAGCACGTCGATCACCCCGACCGTGGAGCCGACCCGATGA

Upstream 100 bases:

>100_bases
GAGTTCGGGGTGAAGACCTACGTGCCGCTGATCGGCGACGAGCTGCACCTCACGATCGCGGGCGCCTTCGAGAAGCAGGA
CTGACCTGGGAGGATCCGCC

Downstream 100 bases:

>100_bases
ACGCGCGTCACCTCTGCCTGCTGGCAGCTCTCCAGGCCGCCACCCTGCCGGCGGCGGCCGCCGAGTGGGCGGTCGATCCG
GGCAAGAGCGCCATCCGGTT

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVLALTALRVLWRLTHRPPPHPA
GMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIPTVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLA
ALLAIHVAAALRHHLLLRDDVLRRMLPGRSTSITPTVEPTR

Sequences:

>Translated_201_residues
MANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVLALTALRVLWRLTHRPPPHPA
GMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIPTVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLA
ALLAIHVAAALRHHLLLRDDVLRRMLPGRSTSITPTVEPTR
>Mature_200_residues
ANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVLALTALRVLWRLTHRPPPHPAG
MPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIPTVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLAA
LLAIHVAAALRHHLLLRDDVLRRMLPGRSTSITPTVEPTR

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=186, Percent_Identity=34.4086021505376, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 21740; Mature: 21609

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTALRVLWRLTHRPPPHPAGMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIP
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
TVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLAALLAIHVAAALRHHLLLRDD
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRRMLPGRSTSITPTVEPTR
HHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANGVSARRYSAVAILLHWASALGVLVLIGLGLTMTHAGLAPLRQFQLYQWHKSVGITVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTALRVLWRLTHRPPPHPAGMPARERRAAAAAHHLLYLLLVGLPLTGWAVVSLSPFNIP
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
TVLYGIVPWPHLPLAGLAPDPAAAEGVLKRVHALGAWFLAALLAIHVAAALRHHLLLRDD
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRRMLPGRSTSITPTVEPTR
HHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]