| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yceI [H]
Identifier: 170750789
GI number: 170750789
Start: 4666750
End: 4667370
Strand: Direct
Name: yceI [H]
Synonym: Mrad2831_4400
Alternate gene names: 170750789
Gene position: 4666750-4667370 (Clockwise)
Preceding gene: 170750786
Following gene: 170750790
Centisome position: 76.78
GC content: 69.08
Gene sequence:
>621_bases TTGAAGTCGATTCTCGCCTCCGGCCTTCTGGCCCTGCTGGTCGCCACCCCGGTCGCCACCCCGGTGCTGGCCCAGACACC GCCGACCCGCGACCCCGCCCAGATCCAGGCCGGCACCTACGCGGTCGACCCCGGCCACACCCAGGTCGGCTGGCGGGTCT CCCACATGGGCTTCTCGAACTACGCGGGCGGCTTCTCGGACGTGTCCGGCACGCTGGAGCTGCAGCCGAAGAACCCGGCC GCCGCCAAGCTGTCGGTGAAGATCCCGGTCGCCTCGGTGACGACGACCAGCGCCAAGCTCACCGACGAGCTCAAGGGCGA CCAGTGGCTCGACGCCGCCAAGTTCCCCGACATGACCTTCGTGTCCACCAAGGTCGTGCCCGCCGGCAAGGACCACGCGA AGGTGACGGGCGACCTGACGCTGCACGGCGTGACCAAGCCGGTGACGCTCGACGTCACCCTGGTCGGCGCCGGCGTGAAC CCGCTGAGCAAGAAATACACGGTCGGCTTCGAGGCCACCGGCACGCTCAAGCGCTCCGAGTTCGGGGTGAAGACCTACGT GCCGCTGATCGGCGACGAGCTGCACCTCACGATCGCGGGCGCCTTCGAGAAGCAGGACTGA
Upstream 100 bases:
>100_bases GGGTTCCGGATAGCAGGCTCAACCGGTGCCGTGAACGGGTCTACACGGCGGCTGCGGCGCAGCGACTCGCGCTCGGCCGT CTGCTCTGCAGGAGACACCC
Downstream 100 bases:
>100_bases CCTGGGAGGATCCGCCATGGCGAACGGGGTCTCCGCGCGGCGGTACTCCGCCGTGGCGATCCTGCTGCACTGGGCGAGCG CGCTGGGCGTGCTCGTCCTG
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKSILASGLLALLVATPVATPVLAQTPPTRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGGFSDVSGTLELQPKNPA AAKLSVKIPVASVTTTSAKLTDELKGDQWLDAAKFPDMTFVSTKVVPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGVN PLSKKYTVGFEATGTLKRSEFGVKTYVPLIGDELHLTIAGAFEKQD
Sequences:
>Translated_206_residues MKSILASGLLALLVATPVATPVLAQTPPTRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGGFSDVSGTLELQPKNPA AAKLSVKIPVASVTTTSAKLTDELKGDQWLDAAKFPDMTFVSTKVVPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGVN PLSKKYTVGFEATGTLKRSEFGVKTYVPLIGDELHLTIAGAFEKQD >Mature_206_residues MKSILASGLLALLVATPVATPVLAQTPPTRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSNYAGGFSDVSGTLELQPKNPA AAKLSVKIPVASVTTTSAKLTDELKGDQWLDAAKFPDMTFVSTKVVPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGVN PLSKKYTVGFEATGTLKRSEFGVKTYVPLIGDELHLTIAGAFEKQD
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=165, Percent_Identity=41.8181818181818, Blast_Score=118, Evalue=3e-28,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 21568; Mature: 21568
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILASGLLALLVATPVATPVLAQTPPTRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSN CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCEEEECCCCCEECEEEEECCCCC YAGGFSDVSGTLELQPKNPAAAKLSVKIPVASVTTTSAKLTDELKGDQWLDAAKFPDMTF CCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEECCHHHHHHHCCCCCCCHHCCCCEEE VSTKVVPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGVNPLSKKYTVGFEATGTLKRSE EEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEECCC FGVKTYVPLIGDELHLTIAGAFEKQD CCCEEEEEECCCEEEEEEEECCCCCC >Mature Secondary Structure MKSILASGLLALLVATPVATPVLAQTPPTRDPAQIQAGTYAVDPGHTQVGWRVSHMGFSN CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEECCEEEECCCCCEECEEEEECCCCC YAGGFSDVSGTLELQPKNPAAAKLSVKIPVASVTTTSAKLTDELKGDQWLDAAKFPDMTF CCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEECCHHHHHHHCCCCCCCHHCCCCEEE VSTKVVPAGKDHAKVTGDLTLHGVTKPVTLDVTLVGAGVNPLSKKYTVGFEATGTLKRSE EEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEECCC FGVKTYVPLIGDELHLTIAGAFEKQD CCCEEEEEECCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA