Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is ygiB [C]

Identifier: 170750668

GI number: 170750668

Start: 4530356

End: 4531096

Strand: Reverse

Name: ygiB [C]

Synonym: Mrad2831_4278

Alternate gene names: 170750668

Gene position: 4531096-4530356 (Counterclockwise)

Preceding gene: 170750669

Following gene: 170750667

Centisome position: 74.55

GC content: 79.76

Gene sequence:

>741_bases
GTGACGGAGACCGCGCCAGCTCCCGACGCGGCCCCCGATGCTGCCGGCCGCGCCGCCGGCGGGTCCGCGACCGGCTTCGC
CGCCGCCCGCCGCTCCAAGCGCTCGGCCGCCGTGTCTCTGGTCCTGGTCGCGGGCGCCGGCGCGGCCGCCCTGACGCTCG
GCGGCCTCGACCCGTCCCAGCGGGAGGAGGAGGCGCTCGTCTACGGGACGCTCGGCGCCTGCATCGCCCAGCAGCTGCGC
GGCGCCGAGGCCTGCAGCGCCGCCTACACGAGCGCGCAGGAGACCTACGCGGCGACGGCGCCGCGCTACGAGACCGAGGC
CGATTGCCAGCGCCACCACGGGACCGGCGGCTGCACGCCGGGCGCGCAGGTCACGGAGGCCGCGCGCGGCCGCTACCTGC
CGGTGATGGCCGCCTTCATGATGGGGCGGACGGACGCGCAGGACCTGCCGGTCCAGCCGCTCTACCCGCACGCGCCCGAG
GAGGAGCGCGACGAGGCCGGGACCGCGACGGCCGGGCACGGGGGCGGCTACTGCACCGGTGCGGGCGGCCGGGTCGCCTA
CGCGGGCGGCGCCTCGCGGGTCCACGTCCCCGCCTCGGTCGCCCGCACCGCGAGCACGACGAGCACGACGACGAGCACGA
CCCCGCGCACGGTCAGCCGCGGCGGCTTCGGCGGCACCGGGCGGGCGACGGCGTTCTCCGGAGGCTCGGGCGGCCGCGCG
GGCGGGTTCGGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CGCATCGAGGAGGACCGCGCCGCCGCCGCGATCCTCCTCGGCGCGGCCTCGCTGGCGGGGGGCGTCGTGAACGCCGCCTC
GATGACCTATTGAGGGGCCG

Downstream 100 bases:

>100_bases
TGCGCCGCGTGCCGATCCCGGAGCGGCCCGACTGGCGGCTCCACGCCGCGCGCGCCGGCTTCACCTTCCACACGTTCGAC
GGCGCCCCCTACTGGGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQREEEALVYGTLGACIAQQLR
GAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTPGAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPE
EERDEAGTATAGHGGGYCTGAGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA
GGFGGG

Sequences:

>Translated_246_residues
MTETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQREEEALVYGTLGACIAQQLR
GAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTPGAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPE
EERDEAGTATAGHGGGYCTGAGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA
GGFGGG
>Mature_245_residues
TETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQREEEALVYGTLGACIAQQLRG
AEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTPGAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPEE
ERDEAGTATAGHGGGYCTGAGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRAG
GFGGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24201; Mature: 24069

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQ
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCHHEEEECCCCCCC
REEEALVYGTLGACIAQQLRGAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTP
CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
GAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPEEERDEAGTATAGHGGGYCTG
CHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEC
AGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA
CCCEEEEECCCCEEECCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCC
GGFGGG
CCCCCC
>Mature Secondary Structure 
TETAPAPDAAPDAAGRAAGGSATGFAAARRSKRSAAVSLVLVAGAGAAALTLGGLDPSQ
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCHHEEEECCCCCCC
REEEALVYGTLGACIAQQLRGAEACSAAYTSAQETYAATAPRYETEADCQRHHGTGGCTP
CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCC
GAQVTEAARGRYLPVMAAFMMGRTDAQDLPVQPLYPHAPEEERDEAGTATAGHGGGYCTG
CHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEC
AGGRVAYAGGASRVHVPASVARTASTTSTTTSTTPRTVSRGGFGGTGRATAFSGGSGGRA
CCCEEEEECCCCEEECCHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCC
GGFGGG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA