| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yjfL [H]
Identifier: 170750669
GI number: 170750669
Start: 4531104
End: 4531502
Strand: Reverse
Name: yjfL [H]
Synonym: Mrad2831_4279
Alternate gene names: 170750669
Gene position: 4531502-4531104 (Counterclockwise)
Preceding gene: 170750670
Following gene: 170750668
Centisome position: 74.56
GC content: 71.43
Gene sequence:
>399_bases GTGACCCTGGTCTCCGGACTGCCCGACTTCCTGCTCTATCTCGGCACCGCGGCCGGGCTGATCGGCCTCTACCTGCTGAT CTACACCCTCGCCACCGCGCACAACGAGCTCGCGCTGATCCGCCGGGACGTGACGGCGGCCGCCGTCGCGCTGGGCGGGA GCCTGGTCGGCTTCACCCTGCCGCTGGCGGTGGCGATCTACAACGCGGCGTCCCTGCTCGACTGCCTGGTCTGGGGGCTG ATCGCCCTCGTGATCCAGATCGCGATCTACTGGCTCGTGCGCCTCGCGGTGCCGGACCTGTCGCGGCGCATCGAGGAGGA CCGCGCCGCCGCCGCGATCCTCCTCGGCGCGGCCTCGCTGGCGGGGGGCGTCGTGAACGCCGCCTCGATGACCTATTGA
Upstream 100 bases:
>100_bases CAGCCCCGACATCCGCTTCGCGTGCCGGGCGATTCGACCGGAAGACCTGTCCGGTCGCGGCGCGCGCGACGATCGGGGCC GGCGAGACGGCGGGTCTTGC
Downstream 100 bases:
>100_bases GGGGCCGGTGACGGAGACCGCGCCAGCTCCCGACGCGGCCCCCGATGCTGCCGGCCGCGCCGCCGGCGGGTCCGCGACCG GCTTCGCCGCCGCCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTLVSGLPDFLLYLGTAAGLIGLYLLIYTLATAHNELALIRRDVTAAAVALGGSLVGFTLPLAVAIYNAASLLDCLVWGL IALVIQIAIYWLVRLAVPDLSRRIEEDRAAAAILLGAASLAGGVVNAASMTY
Sequences:
>Translated_132_residues MTLVSGLPDFLLYLGTAAGLIGLYLLIYTLATAHNELALIRRDVTAAAVALGGSLVGFTLPLAVAIYNAASLLDCLVWGL IALVIQIAIYWLVRLAVPDLSRRIEEDRAAAAILLGAASLAGGVVNAASMTY >Mature_131_residues TLVSGLPDFLLYLGTAAGLIGLYLLIYTLATAHNELALIRRDVTAAAVALGGSLVGFTLPLAVAIYNAASLLDCLVWGLI ALVIQIAIYWLVRLAVPDLSRRIEEDRAAAAILLGAASLAGGVVNAASMTY
Specific function: Unknown
COG id: COG3766
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0719 family [H]
Homologues:
Organism=Escherichia coli, GI1790627, Length=132, Percent_Identity=41.6666666666667, Blast_Score=104, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007140 [H]
Pfam domain/function: PF03994 DUF350 [H]
EC number: NA
Molecular weight: Translated: 13741; Mature: 13609
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVSGLPDFLLYLGTAAGLIGLYLLIYTLATAHNELALIRRDVTAAAVALGGSLVGFTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH PLAVAIYNAASLLDCLVWGLIALVIQIAIYWLVRLAVPDLSRRIEEDRAAAAILLGAASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVVNAASMTY HHHHHHHHHCCC >Mature Secondary Structure TLVSGLPDFLLYLGTAAGLIGLYLLIYTLATAHNELALIRRDVTAAAVALGGSLVGFTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH PLAVAIYNAASLLDCLVWGLIALVIQIAIYWLVRLAVPDLSRRIEEDRAAAAILLGAASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVVNAASMTY HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]