Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170750609

Identifier: 170750609

GI number: 170750609

Start: 4468087

End: 4469484

Strand: Reverse

Name: 170750609

Synonym: Mrad2831_4219

Alternate gene names: NA

Gene position: 4469484-4468087 (Counterclockwise)

Preceding gene: 170750610

Following gene: 170750608

Centisome position: 73.54

GC content: 75.46

Gene sequence:

>1398_bases
ATGGCGACCCTCCCCGCCTGGATCCTGCGCCGGGAGACCCTGCTCCTGGCCGGGGCCGCCCTCCTGGGCGCGGGCGGGGT
CGCGGCCTGGGTCCTGCTCCAGGCGACGGTCCTGACCATCGCGGTCGCGCCGCGCGACGGCACCGAGCCCGGCCTGATCA
AGGCCTACGCGGACGCGCTCGACGCCGCGCACGAGAAGGTCCGGCTGAGGATCCTGTCCTTCGACGACGTGCGCGAGAGC
GCCGCCGCCTTGCAGGACGGGCGGGCCGACCTCGCGGTGGTCCGCCCCGACGTGCTGCTCCCGACCAACGGCCTGACCCT
GGCGATCCTGCGCGACCAGGCGATGGTCATCGCCTCGCCCGAGCAGGCCGGGATCACCAGCTTCCCGAAGCTCGCCGGCA
AGCGGCTCGGCATCGCGGCGCACCGGGACGCCGATCTCTGGCTGCTCCGGAATCTCCTCGGCTATTACGGGCTCACCCTG
GAGGAGGCCGCCGGCCCGGCCCGGGACTCGGCGGTCCTGCTGGTCCCGGTCGACCAGGAGGCGGTGGCCGCCGCCTTCCG
CGAGCGGCGGATCGACGCCTTCGTCAGCATCATCGCGCCCTCGGCACCCAAGGCGCTGGCCCTGGTCTCGGCCGTGCAGG
GCGTCGCCCGCGGCGGCAAGGTGGCGTTCGTCGCCGTGGAGGATGACGGCGCCGTGATCGAGCGCTTCCCGCGGCTCCAG
GCGGTCACGGTCCCGGGCGGCCTGTTCGGCGGCCGGCCGAAGCTGCCGGCCGACGACGTGAAGACGGTGGGCGCCTCGTA
CCGGCTGATGGCCCGCGCCTCCCTGAGCCGGGTCGTGGCAGCCGACGTGACCCAGCAGCTCTTCGAGAAGCGCACCGCCG
CCGCGCAGGCGACGGACGCCGCCGAGTACGTCCAGGCCCCGGCCTACGACACGACCGTGGCGGCCACCAGCGCCCGGATC
CCGATCCATCCGGGGGCGATCGACTACTACGAGCGCGACCAGCACGGCTTCATCGAGCGCTACGGCGACACGCTCTACCT
ACTCGGCGCGCTGGCGGGCGGGCTCGTCTCGGTGCTGGCCTGGATCCGGCAGCGCCTCGCCGGCCTGCGCCGCGAGCGCA
TCGACGAGATCATGGACCGGCTCCTGGAGATCGCCGGGCAGGCCCGGGCGCTGCGCGACCCGGCGGCGATCGAGGCGCTC
ACCGTCGAGGTCGACGCGCTGGCCATGGACGTGGTGCGCTACGCCCGGGCGCGGGAGCCGGACACCCGGACCATGTCGGC
GGCGTCCGTCGCCATCGACACGGCGCGGGCGACCATCGCGGATTGCCGGGCGCGGGCGGCCGGGGACGGGGGGCGGACCG
GGCGCGCCGTCCGGCTGCACGGCGCGGGCGGGGCCTGA

Upstream 100 bases:

>100_bases
CGGCATGAAGCGGGTCAAGGCCGGGCCGCCGCGCCTGATCGGCGCCGCCCTGATGGTCGGCGGCATCGTGCTGATCTCGC
TGTTCTGAGCGCCCGGGCCG

Downstream 100 bases:

>100_bases
CATGTCCGCTCCAGCCACCGCGCCCGCAGCGGACGGGAGCGAGGCCGCGACGCGTGCCTCCGTCCGGGCACGCGTCGCGG
CGCGGGTGCAGCGGTCCCTG

Product: TRAP-type transport system periplasmic component-like protein

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADALDAAHEKVRLRILSFDDVRES
AAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASPEQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTL
EEAAGPARDSAVLLVPVDQEAVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ
AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDAAEYVQAPAYDTTVAATSARI
PIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLAWIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEAL
TVEVDALAMDVVRYARAREPDTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA

Sequences:

>Translated_465_residues
MATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADALDAAHEKVRLRILSFDDVRES
AAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASPEQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTL
EEAAGPARDSAVLLVPVDQEAVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ
AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDAAEYVQAPAYDTTVAATSARI
PIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLAWIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEAL
TVEVDALAMDVVRYARAREPDTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA
>Mature_464_residues
ATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADALDAAHEKVRLRILSFDDVRESA
AALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASPEQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTLE
EAAGPARDSAVLLVPVDQEAVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQA
VTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDAAEYVQAPAYDTTVAATSARIP
IHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLAWIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEALT
VEVDALAMDVVRYARAREPDTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49134; Mature: 49003

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADAL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHH
DAAHEKVRLRILSFDDVRESAAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASP
HHHHHEEEEEEECHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEEEEECCEEEEECC
EQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTLEEAAGPARDSAVLLVPVDQE
CCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCHH
AVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCE
AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDA
EEECCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AEYVQAPAYDTTVAATSARIPIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLA
HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
WIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEALTVEVDALAMDVVRYARAREP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHCCCC
DTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
ATLPAWILRRETLLLAGAALLGAGGVAAWVLLQATVLTIAVAPRDGTEPGLIKAYADAL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHH
DAAHEKVRLRILSFDDVRESAAALQDGRADLAVVRPDVLLPTNGLTLAILRDQAMVIASP
HHHHHEEEEEEECHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEEEEECCEEEEECC
EQAGITSFPKLAGKRLGIAAHRDADLWLLRNLLGYYGLTLEEAAGPARDSAVLLVPVDQE
CCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCHH
AVAAAFRERRIDAFVSIIAPSAPKALALVSAVQGVARGGKVAFVAVEDDGAVIERFPRLQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCE
AVTVPGGLFGGRPKLPADDVKTVGASYRLMARASLSRVVAADVTQQLFEKRTAAAQATDA
EEECCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AEYVQAPAYDTTVAATSARIPIHPGAIDYYERDQHGFIERYGDTLYLLGALAGGLVSVLA
HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
WIRQRLAGLRRERIDEIMDRLLEIAGQARALRDPAAIEALTVEVDALAMDVVRYARAREP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHCCCC
DTRTMSAASVAIDTARATIADCRARAAGDGGRTGRAVRLHGAGGA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA