| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750605
Identifier: 170750605
GI number: 170750605
Start: 4464735
End: 4465943
Strand: Direct
Name: 170750605
Synonym: Mrad2831_4215
Alternate gene names: NA
Gene position: 4464735-4465943 (Clockwise)
Preceding gene: 170750604
Following gene: 170750606
Centisome position: 73.46
GC content: 73.37
Gene sequence:
>1209_bases ATGACCGATCCGGCACGGCGGGCCTTCCTGAAGAGCGCCGCCCTCGGCGCCCTGGCGGCGGGAAGCGGCCTGCGGCCGGC CCGCGCCGACGAGGCGGCGCAGCTGCCCTTCGGCAACGGCGAGCGCCCGCTCGTGGCCTATCCGGGCAAGCGGCCGCTGC TGCAGACCACCGCCCGGCCGCCCCAGCTGGAGACGCCGTTCGCGGTCTTCGACGCGGGCGCGATCACGCCGAACGACGCC TTCTTCGTCCGCTACCACCTCGCCGACATCCCCCTGGAGATCGATCCCGAGGCGTTCCGGCTGAACGTCGGCGGCCACGT CGAGCGGCCGGCCTCGTTCAGCCTCGCGGAGCTGAAGGCGCTGCCCGGCGGGACCGAGATCGTCGCGGTCAACCAGTGCT CGGGCAATTCCCGCGGCTTCTTCGAGCCGCGCATGGCCGGCGGCCAGCTCGCCAACGGCGCCATGGGCTGCGCCCGCTGG ACCGGCGTGCCGCTGAGGACCGTGCTGGATCGGGCCGGCGTGAAGGCCGGGGCCGTGCAGGTCGCCTTCAACGGGCTCGA CCGCCCGGTCCTGCCGGAGACGCCGGACTTCGCCAAGGCGCTGACCCTCGACCAGGCCGGCGACGGGCAGGTGCTGCTCG CCTGGGGCATGAACGGCGCGGATCTGCCATGGCTCAACGGCTACCCGCTCCGCCTCGTCGTGCCCGGCTATTACGGGACC TACTGGGTCAAGCACCTCGACACGGTCACGGTGCTGGACAAGCCCTTCGAGGGCTTCTTCATGAAGACCGCCTACCGCAT CCCCGACAATGCCTGCGCCTGCACCGAGCCCGGTCAGGCGGCCGCCGCCACGGTGCCGATCGGGCGCCTCAATGTCCGGT CGTTCCTGACGAACCTGACCGACGGCGCGCAGGTGAAGGCCGGTCCGGTCGCCCTGCGCGGCATCGCCTTCGACGGCGGC TCGGGCATCAGGGAGGTCGCGGTCTCGACCGACGACGGCGCCACCTGGACTCGGGCCGCGCTGGGCGGGGATCTCGGCCC CTACGCGTTCCGGACCTGGTCGCTCGCGACCGCGCTCACGCCCGGCGCCCACGCGATCCGGGTGCGGGCCACCGCCAACG ACGGCAGCACCCAGCCGACGACGTCGCGCTGGAACCCGTCCGGCTACATGCGCAACGGCGTCGAGACCACCCGGGTGCGG GCGGCGTGA
Upstream 100 bases:
>100_bases GAATGCGGGGGATCTGGGCCTTTCGGCCGGAGCGGGCTATCCACGGGAGCCGGCCGCGCGGGGACCGGGACGTCCGGTGC GGGCCGGGAAGGAGCAGAGG
Downstream 100 bases:
>100_bases GCGCGAACGGGAGGACCAACGGGATGCGGGCGCTCGTGCTCGGCGCGGTGATCGCGGGTCTGACGGCCGGCGCGGCCTGG GCGGCGCCGCGGACCTACAC
Product: molybdopterin binding oxidoreductase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Sulfite Dehydrogenase; Oxidoreductase; Sulfite-Dehydrogenase; Membrane-Bound Oxidoreductase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTDPARRAFLKSAALGALAAGSGLRPARADEAAQLPFGNGERPLVAYPGKRPLLQTTARPPQLETPFAVFDAGAITPNDA FFVRYHLADIPLEIDPEAFRLNVGGHVERPASFSLAELKALPGGTEIVAVNQCSGNSRGFFEPRMAGGQLANGAMGCARW TGVPLRTVLDRAGVKAGAVQVAFNGLDRPVLPETPDFAKALTLDQAGDGQVLLAWGMNGADLPWLNGYPLRLVVPGYYGT YWVKHLDTVTVLDKPFEGFFMKTAYRIPDNACACTEPGQAAAATVPIGRLNVRSFLTNLTDGAQVKAGPVALRGIAFDGG SGIREVAVSTDDGATWTRAALGGDLGPYAFRTWSLATALTPGAHAIRVRATANDGSTQPTTSRWNPSGYMRNGVETTRVR AA
Sequences:
>Translated_402_residues MTDPARRAFLKSAALGALAAGSGLRPARADEAAQLPFGNGERPLVAYPGKRPLLQTTARPPQLETPFAVFDAGAITPNDA FFVRYHLADIPLEIDPEAFRLNVGGHVERPASFSLAELKALPGGTEIVAVNQCSGNSRGFFEPRMAGGQLANGAMGCARW TGVPLRTVLDRAGVKAGAVQVAFNGLDRPVLPETPDFAKALTLDQAGDGQVLLAWGMNGADLPWLNGYPLRLVVPGYYGT YWVKHLDTVTVLDKPFEGFFMKTAYRIPDNACACTEPGQAAAATVPIGRLNVRSFLTNLTDGAQVKAGPVALRGIAFDGG SGIREVAVSTDDGATWTRAALGGDLGPYAFRTWSLATALTPGAHAIRVRATANDGSTQPTTSRWNPSGYMRNGVETTRVR AA >Mature_401_residues TDPARRAFLKSAALGALAAGSGLRPARADEAAQLPFGNGERPLVAYPGKRPLLQTTARPPQLETPFAVFDAGAITPNDAF FVRYHLADIPLEIDPEAFRLNVGGHVERPASFSLAELKALPGGTEIVAVNQCSGNSRGFFEPRMAGGQLANGAMGCARWT GVPLRTVLDRAGVKAGAVQVAFNGLDRPVLPETPDFAKALTLDQAGDGQVLLAWGMNGADLPWLNGYPLRLVVPGYYGTY WVKHLDTVTVLDKPFEGFFMKTAYRIPDNACACTEPGQAAAATVPIGRLNVRSFLTNLTDGAQVKAGPVALRGIAFDGGS GIREVAVSTDDGATWTRAALGGDLGPYAFRTWSLATALTPGAHAIRVRATANDGSTQPTTSRWNPSGYMRNGVETTRVRA A
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=376, Percent_Identity=32.1808510638298, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI74099702, Length=376, Percent_Identity=32.1808510638298, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI74099694, Length=376, Percent_Identity=32.1808510638298, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71992535, Length=364, Percent_Identity=30.4945054945055, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI18859905, Length=382, Percent_Identity=29.5811518324607, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42475; Mature: 42343
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPARRAFLKSAALGALAAGSGLRPARADEAAQLPFGNGERPLVAYPGKRPLLQTTARP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCC PQLETPFAVFDAGAITPNDAFFVRYHLADIPLEIDPEAFRLNVGGHVERPASFSLAELKA CCCCCCEEEEECCCCCCCCEEEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCHHHHHC LPGGTEIVAVNQCSGNSRGFFEPRMAGGQLANGAMGCARWTGVPLRTVLDRAGVKAGAVQ CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEE VAFNGLDRPVLPETPDFAKALTLDQAGDGQVLLAWGMNGADLPWLNGYPLRLVVPGYYGT EEECCCCCCCCCCCCCHHHEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHH YWVKHLDTVTVLDKPFEGFFMKTAYRIPDNACACTEPGQAAAATVPIGRLNVRSFLTNLT HHHHHCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCC DGAQVKAGPVALRGIAFDGGSGIREVAVSTDDGATWTRAALGGDLGPYAFRTWSLATALT CCCEEEECCEEEEEEEECCCCCCEEEEEECCCCCCEEHHHHCCCCCCHHEEEEEHHHHCC PGAHAIRVRATANDGSTQPTTSRWNPSGYMRNGVETTRVRAA CCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCEEEECC >Mature Secondary Structure TDPARRAFLKSAALGALAAGSGLRPARADEAAQLPFGNGERPLVAYPGKRPLLQTTARP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCC PQLETPFAVFDAGAITPNDAFFVRYHLADIPLEIDPEAFRLNVGGHVERPASFSLAELKA CCCCCCEEEEECCCCCCCCEEEEEEEEECCCEEECCCEEEEECCCCCCCCCCCCHHHHHC LPGGTEIVAVNQCSGNSRGFFEPRMAGGQLANGAMGCARWTGVPLRTVLDRAGVKAGAVQ CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHCCCCCCEEE VAFNGLDRPVLPETPDFAKALTLDQAGDGQVLLAWGMNGADLPWLNGYPLRLVVPGYYGT EEECCCCCCCCCCCCCHHHEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHH YWVKHLDTVTVLDKPFEGFFMKTAYRIPDNACACTEPGQAAAATVPIGRLNVRSFLTNLT HHHHHCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCC DGAQVKAGPVALRGIAFDGGSGIREVAVSTDDGATWTRAALGGDLGPYAFRTWSLATALT CCCEEEECCEEEEEEEECCCCCCEEEEEECCCCCCEEHHHHCCCCCCHHEEEEEHHHHCC PGAHAIRVRATANDGSTQPTTSRWNPSGYMRNGVETTRVRAA CCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA