| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is engD [H]
Identifier: 170750517
GI number: 170750517
Start: 4378576
End: 4379673
Strand: Reverse
Name: engD [H]
Synonym: Mrad2831_4124
Alternate gene names: 170750517
Gene position: 4379673-4378576 (Counterclockwise)
Preceding gene: 170750518
Following gene: 170750516
Centisome position: 72.06
GC content: 69.4
Gene sequence:
>1098_bases ATGGGCTTCAAATGCGGCATCGTCGGCCTGCCGAACGTCGGCAAGTCGACCCTCTTCAACGCGCTGACGCAGACGGCGGC CGCCCAGGCGGCGAACTACCCGTTCTGCACCATCGAGCCGAATGTCGGCGAGGTGGCGGTGCCGGATCCGCGGCTGACTG ACCTCGCCCGGATCGCGTCCTCGAAGGAGATCATCCCGACGCGGCTGACCTTCGTGGACATCGCCGGCCTCGTCCGCGGC GCCTCCAAGGGCGAGGGCCTGGGCAACCAGTTCCTGGCCAATATCCGCGAGGTCGACGCCATCGCCCACGTGGTCCGCTG CTTCACGGACGGCGACGTCACCCACGTGGAGGGCAAGGTCGATCCGGCCGCCGATATCGAGACCATCGAGACCGAGCTGA TGCTCGCCGACCTCGACAGCCTGGAGCGCCGCGCCCAGTCGCTGGAGAAGAAGGCCAAGGGCGCCGACAAGGAGGCCAAG GAGACCCTCGACCTCGTCAACCGCGCCCTGCCGCTCCTGCGCGACGGCAAGCCCGCCCGCCTCGTGGAGCGCAAGCCCGA CGAGGAGAGGCTGTTCCAGCAGCTCGGCCTGATGACCGCCAAGCCCGTCCTCTACGTCTGCAACGTCGACGAGGGCGACG CCGACAAGGGCAACGCCTACTCGGACGCGGTCTTCGCCCGCGCCAGGGCGGAGGGCGCCGTGGCGGTGGTGGTCTCGGCC AAGATCGAGAGCGAGATCGCCGTGATGCCGGAGGCCGACCAGGCCGAGTTCCTGGAGGCGGTGGGGCTCACCGAGCCGGG CCTGAACCGGGTGATCCGCGCCGGCTACGACCTGCTCGGCCTCGTCACCTACTTCACGGTCGGCCCCAAGGAGGCCCGCG CCTGGACGATCACCAAGGGCACCCGCGCCCCCGGGGCGGCCGGGGTGATCCACTCGGATTTCGAGAAGGGCTTCATCCGC GCCGAGACGATCGCGTTCAAGGATTACACGACCCTCAACGGCGAGGCCGGGGCCCGGGACGCCGGCAAGCTCCGGCTGGA GGGCAAGGATTACGTGGTGCAGGACGGCGACGTGCTGCACTTCCGCTTCGCCAACTGA
Upstream 100 bases:
>100_bases GTGCTCGACCGAGGACAGGGCGCGCGGCGTGTTCGCGGACCCGATTCTCATCAACCCATTCCGCGCGTCGCCCGACGACG CGCTGCGACGGAACTGACCC
Downstream 100 bases:
>100_bases GGCCGGTGCTGTCGGCACGGTGCGCGCGCTTCATCCCCGCCCCGCTGATCAACGAGACGAGCCCGCCATGCCCGATCCCG CCCTCGAAGACTTCTCCGTC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MGFKCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLTDLARIASSKEIIPTRLTFVDIAGLVRG ASKGEGLGNQFLANIREVDAIAHVVRCFTDGDVTHVEGKVDPAADIETIETELMLADLDSLERRAQSLEKKAKGADKEAK ETLDLVNRALPLLRDGKPARLVERKPDEERLFQQLGLMTAKPVLYVCNVDEGDADKGNAYSDAVFARARAEGAVAVVVSA KIESEIAVMPEADQAEFLEAVGLTEPGLNRVIRAGYDLLGLVTYFTVGPKEARAWTITKGTRAPGAAGVIHSDFEKGFIR AETIAFKDYTTLNGEAGARDAGKLRLEGKDYVVQDGDVLHFRFAN
Sequences:
>Translated_365_residues MGFKCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLTDLARIASSKEIIPTRLTFVDIAGLVRG ASKGEGLGNQFLANIREVDAIAHVVRCFTDGDVTHVEGKVDPAADIETIETELMLADLDSLERRAQSLEKKAKGADKEAK ETLDLVNRALPLLRDGKPARLVERKPDEERLFQQLGLMTAKPVLYVCNVDEGDADKGNAYSDAVFARARAEGAVAVVVSA KIESEIAVMPEADQAEFLEAVGLTEPGLNRVIRAGYDLLGLVTYFTVGPKEARAWTITKGTRAPGAAGVIHSDFEKGFIR AETIAFKDYTTLNGEAGARDAGKLRLEGKDYVVQDGDVLHFRFAN >Mature_364_residues GFKCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLTDLARIASSKEIIPTRLTFVDIAGLVRGA SKGEGLGNQFLANIREVDAIAHVVRCFTDGDVTHVEGKVDPAADIETIETELMLADLDSLERRAQSLEKKAKGADKEAKE TLDLVNRALPLLRDGKPARLVERKPDEERLFQQLGLMTAKPVLYVCNVDEGDADKGNAYSDAVFARARAEGAVAVVVSAK IESEIAVMPEADQAEFLEAVGLTEPGLNRVIRAGYDLLGLVTYFTVGPKEARAWTITKGTRAPGAAGVIHSDFEKGFIRA ETIAFKDYTTLNGEAGARDAGKLRLEGKDYVVQDGDVLHFRFAN
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=367, Percent_Identity=42.7792915531335, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI58761502, Length=231, Percent_Identity=35.0649350649351, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=58.4022038567493, Blast_Score=428, Evalue=1e-121, Organism=Escherichia coli, GI1789574, Length=148, Percent_Identity=29.7297297297297, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=42.896174863388, Blast_Score=280, Evalue=1e-75, Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=40.2702702702703, Blast_Score=266, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6321773, Length=381, Percent_Identity=35.6955380577428, Blast_Score=226, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6321649, Length=356, Percent_Identity=30.3370786516854, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24640873, Length=367, Percent_Identity=42.2343324250681, Blast_Score=280, Evalue=8e-76, Organism=Drosophila melanogaster, GI24640877, Length=367, Percent_Identity=42.2343324250681, Blast_Score=280, Evalue=8e-76, Organism=Drosophila melanogaster, GI24640875, Length=367, Percent_Identity=42.2343324250681, Blast_Score=280, Evalue=8e-76, Organism=Drosophila melanogaster, GI24640879, Length=324, Percent_Identity=39.5061728395062, Blast_Score=224, Evalue=5e-59, Organism=Drosophila melanogaster, GI24585318, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39259; Mature: 39128
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLTDLARIAS CCEEECEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCHHHHHHHHC SKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFTDGDVTHVEGKV CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC DPAADIETIETELMLADLDSLERRAQSLEKKAKGADKEAKETLDLVNRALPLLRDGKPAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCH LVERKPDEERLFQQLGLMTAKPVLYVCNVDEGDADKGNAYSDAVFARARAEGAVAVVVSA HHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE KIESEIAVMPEADQAEFLEAVGLTEPGLNRVIRAGYDLLGLVTYFTVGPKEARAWTITKG ECCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCEEEEECC TRAPGAAGVIHSDFEKGFIRAETIAFKDYTTLNGEAGARDAGKLRLEGKDYVVQDGDVLH CCCCCCCCCCHHHHHHCCEEEEEEEEECCEEECCCCCCCCCCEEEECCCCEEEECCCEEE FRFAN EEECC >Mature Secondary Structure GFKCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVAVPDPRLTDLARIAS CEEECEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCHHHHHHHHC SKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIREVDAIAHVVRCFTDGDVTHVEGKV CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC DPAADIETIETELMLADLDSLERRAQSLEKKAKGADKEAKETLDLVNRALPLLRDGKPAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCH LVERKPDEERLFQQLGLMTAKPVLYVCNVDEGDADKGNAYSDAVFARARAEGAVAVVVSA HHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE KIESEIAVMPEADQAEFLEAVGLTEPGLNRVIRAGYDLLGLVTYFTVGPKEARAWTITKG ECCCCEEECCCCCHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCEEEEECC TRAPGAAGVIHSDFEKGFIRAETIAFKDYTTLNGEAGARDAGKLRLEGKDYVVQDGDVLH CCCCCCCCCCHHHHHHCCEEEEEEEEECCEEECCCCCCCCCCEEEECCCCEEEECCCEEE FRFAN EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA