| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750467
Identifier: 170750467
GI number: 170750467
Start: 4324637
End: 4326505
Strand: Reverse
Name: 170750467
Synonym: Mrad2831_4074
Alternate gene names: NA
Gene position: 4326505-4324637 (Counterclockwise)
Preceding gene: 170750468
Following gene: 170750466
Centisome position: 71.18
GC content: 70.89
Gene sequence:
>1869_bases ATGATGATGACACGCGCCCGCCGGAGCGTTTCGGCGCTCGCCCTGCTGCTCGCCGCCGGGCTTCCGCAGACCGTGCTCGC GGCGCAGCCGAAGGAATCGACCCCGGTGCTCGACTACGAGCCCGCGGACTCGCTCGAGGGCAACTTCCTCTCCGCCTACA TCGCGGGCGCGTCGCGGGACACGGCGGCGGCGGCGACCTTCTACCGCGAGGCGGTGAAGGCCGACCCGCGCAACGCGGAA CTCGTCGAGCGCGCCTTCATCTCGCTCCTGGCCGACGGTGCCCTGCCGGACGCGTTCCGCACCGCCGAGAAGCTGATCGC CCGCGATCCGACCAACGGCCTCGCCAACCTCTCCCTCGGGGTGCGCCAGATCAAGGCCGGCCAGTGGGCCGCCGCTCGCC AGAACTTCTCCCGGAGCGGCCGGGGTGCTGCGACCGACCTGACCGCGACGCTGCTGACCGCGTGGTCCTACGCGGGCGCG GGCGACGGCAAGAAGGCGCTGGAGACGGTCAACAAGCTCCGGGGCGAGCGCTACTACAACACCTTCCGCGACTACCACGC CGGCCTGATCGCCTCGGTGACCGGCGACAACGCCGAGGCCGAGCGCCGGCTCAAGGCCGCCTACGACGCCGACCACAACA CCCTGCGCATCGTCGACGCCTACGCCCGGATGGAGGCCAGCCTCGGCCGCACCGACCTGGCGATCCAGGCCTATTCCGAC TTCGACCAGCTCTCGCCGCGCCACCCGCTCGTGCGCGACGCCCTCGAGAAGCTGAAGGAGGGCAAGCCGCTCACCCGGCT GATCGGCACCGCCCAGGAGGGCGCCGCCGAGGTGCTGTACGGGCTCGGCTCGGCCGGCTCGACCCAGGGCGACGAGCTGC CCGCGGTGATCTACCTGCGGCTGGCGCTCTACCTCGCCCCCGACCACGCCCTCGCGCGGCTGACGCTCGCCGACACGCTG GACCGGATGAAGCAGCCCGAGCGCGCCAACGAGGCCTACGCGCAGATCCCGGCCAACTCCCCGCTCAAGCTCAACGCCGA CATCCAGATCGGCCTGAACCTGGAGCAGATGGGCAAGGGCGACGAGGCGCTCGCCCATCTCGACGCGGCGATGAAAGCCC ACCCGGACGACATCGACGTCATCACGGCGCTCGGCAACGTCCAGCGCGCCCGCAAGAAGTACGAGGAGGCGGCGGCCACC TACACCCGCGCCATCGACCTGATCGGCGACCGGCCGCAATCCAACTACTGGACGACCTACTATTTCCGCGGCACCGCCTA CGAGCGCGCCAAGCAGTGGCCGAAGGCCGAGGCCGACCTGAAGAAGGCCCTGTCGCTGGTGCCCGCCAACCAGCCCGCCG CCAAGGCGCAGGTGATGAACTACCTCGGCTATTCCTGGGTCGACCAGAACATCAACATCGACGAGGCGTTCAAGCTGCTG CAGCAGGCCGCCGACGCGAGCCCCCGGGACGGCATGATCGTCGACAGCCTCGGCTGGGCCTATTACCGCCTCGGCCGCTG GGACGACGCGGTGCGCGAGCTGGAGAAGGCGGTCGAGCTGAAGCCCGGCGATCCGACCATCAACGACCACCTCGGCGACG CCTACTGGCGCTCGGGCCGGCGCCTCGAGGGCAAGTTCCAGTGGCAGCACGCCAAGGACCTGAACCCCGAGCCGGACGAC CTCGCGCAGATCAACGCGAAGCTGAAGGACGGGCTGCCCGACATCGAGAAGCCGACCGCCACCGCCGAGACGGTGCCGGC CCCGGTCGCCGCCCCGCACAACGCCGAGAACCCGGAGCTGCCGAAGGGCGCGCCCCAGCCGCACGAGGCGCCGGGCTCGG CCGACAAGGCCAAGAAATCGGGGGGCTAG
Upstream 100 bases:
>100_bases GCGGGATGGGTTCAGTGTCCCCAACGTTTTTTCGGGGATGCCCCGCCATTCTCGCGCCCGGCCCTCTCGTGAGCCGGCGC CCAGGAGCCGCGATCGGTTC
Downstream 100 bases:
>100_bases GGCTCCCGCCCGATCCCGCCTCGGGGCGGTGCGGCTGCCGTTCCGGAGATATGTCGACTGTCCGGGCTCCGGGCGCCCGC GTCGCTCTCCCGCGATCGCG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MMMTRARRSVSALALLLAAGLPQTVLAAQPKESTPVLDYEPADSLEGNFLSAYIAGASRDTAAAATFYREAVKADPRNAE LVERAFISLLADGALPDAFRTAEKLIARDPTNGLANLSLGVRQIKAGQWAAARQNFSRSGRGAATDLTATLLTAWSYAGA GDGKKALETVNKLRGERYYNTFRDYHAGLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYSD FDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYLRLALYLAPDHALARLTLADTL DRMKQPERANEAYAQIPANSPLKLNADIQIGLNLEQMGKGDEALAHLDAAMKAHPDDIDVITALGNVQRARKKYEEAAAT YTRAIDLIGDRPQSNYWTTYYFRGTAYERAKQWPKAEADLKKALSLVPANQPAAKAQVMNYLGYSWVDQNINIDEAFKLL QQAADASPRDGMIVDSLGWAYYRLGRWDDAVRELEKAVELKPGDPTINDHLGDAYWRSGRRLEGKFQWQHAKDLNPEPDD LAQINAKLKDGLPDIEKPTATAETVPAPVAAPHNAENPELPKGAPQPHEAPGSADKAKKSGG
Sequences:
>Translated_622_residues MMMTRARRSVSALALLLAAGLPQTVLAAQPKESTPVLDYEPADSLEGNFLSAYIAGASRDTAAAATFYREAVKADPRNAE LVERAFISLLADGALPDAFRTAEKLIARDPTNGLANLSLGVRQIKAGQWAAARQNFSRSGRGAATDLTATLLTAWSYAGA GDGKKALETVNKLRGERYYNTFRDYHAGLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYSD FDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYLRLALYLAPDHALARLTLADTL DRMKQPERANEAYAQIPANSPLKLNADIQIGLNLEQMGKGDEALAHLDAAMKAHPDDIDVITALGNVQRARKKYEEAAAT YTRAIDLIGDRPQSNYWTTYYFRGTAYERAKQWPKAEADLKKALSLVPANQPAAKAQVMNYLGYSWVDQNINIDEAFKLL QQAADASPRDGMIVDSLGWAYYRLGRWDDAVRELEKAVELKPGDPTINDHLGDAYWRSGRRLEGKFQWQHAKDLNPEPDD LAQINAKLKDGLPDIEKPTATAETVPAPVAAPHNAENPELPKGAPQPHEAPGSADKAKKSGG >Mature_622_residues MMMTRARRSVSALALLLAAGLPQTVLAAQPKESTPVLDYEPADSLEGNFLSAYIAGASRDTAAAATFYREAVKADPRNAE LVERAFISLLADGALPDAFRTAEKLIARDPTNGLANLSLGVRQIKAGQWAAARQNFSRSGRGAATDLTATLLTAWSYAGA GDGKKALETVNKLRGERYYNTFRDYHAGLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYSD FDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYLRLALYLAPDHALARLTLADTL DRMKQPERANEAYAQIPANSPLKLNADIQIGLNLEQMGKGDEALAHLDAAMKAHPDDIDVITALGNVQRARKKYEEAAAT YTRAIDLIGDRPQSNYWTTYYFRGTAYERAKQWPKAEADLKKALSLVPANQPAAKAQVMNYLGYSWVDQNINIDEAFKLL QQAADASPRDGMIVDSLGWAYYRLGRWDDAVRELEKAVELKPGDPTINDHLGDAYWRSGRRLEGKFQWQHAKDLNPEPDD LAQINAKLKDGLPDIEKPTATAETVPAPVAAPHNAENPELPKGAPQPHEAPGSADKAKKSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 67694; Mature: 67694
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMTRARRSVSALALLLAAGLPQTVLAAQPKESTPVLDYEPADSLEGNFLSAYIAGASRD CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCC TAAAATFYREAVKADPRNAELVERAFISLLADGALPDAFRTAEKLIARDPTNGLANLSLG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH VRQIKAGQWAAARQNFSRSGRGAATDLTATLLTAWSYAGAGDGKKALETVNKLRGERYYN HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TFRDYHAGLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYSD HHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCEEEEEHHC FDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYLR HHHCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LALYLAPDHALARLTLADTLDRMKQPERANEAYAQIPANSPLKLNADIQIGLNLEQMGKG HHHHHCCCHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCEEECCCEEECCCHHHHCCC DEALAHLDAAMKAHPDDIDVITALGNVQRARKKYEEAAATYTRAIDLIGDRPQSNYWTTY HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YFRGTAYERAKQWPKAEADLKKALSLVPANQPAAKAQVMNYLGYSWVDQNINIDEAFKLL EEECCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHH QQAADASPRDGMIVDSLGWAYYRLGRWDDAVRELEKAVELKPGDPTINDHLGDAYWRSGR HHHHCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCC RLEGKFQWQHAKDLNPEPDDLAQINAKLKDGLPDIEKPTATAETVPAPVAAPHNAENPEL CCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC PKGAPQPHEAPGSADKAKKSGG CCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MMMTRARRSVSALALLLAAGLPQTVLAAQPKESTPVLDYEPADSLEGNFLSAYIAGASRD CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCC TAAAATFYREAVKADPRNAELVERAFISLLADGALPDAFRTAEKLIARDPTNGLANLSLG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHH VRQIKAGQWAAARQNFSRSGRGAATDLTATLLTAWSYAGAGDGKKALETVNKLRGERYYN HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH TFRDYHAGLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYSD HHHHHHCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCCEEEEEHHC FDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYLR HHHCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LALYLAPDHALARLTLADTLDRMKQPERANEAYAQIPANSPLKLNADIQIGLNLEQMGKG HHHHHCCCHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCEEECCCEEECCCHHHHCCC DEALAHLDAAMKAHPDDIDVITALGNVQRARKKYEEAAATYTRAIDLIGDRPQSNYWTTY HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YFRGTAYERAKQWPKAEADLKKALSLVPANQPAAKAQVMNYLGYSWVDQNINIDEAFKLL EEECCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCCHHHHHHHH QQAADASPRDGMIVDSLGWAYYRLGRWDDAVRELEKAVELKPGDPTINDHLGDAYWRSGR HHHHCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCC RLEGKFQWQHAKDLNPEPDDLAQINAKLKDGLPDIEKPTATAETVPAPVAAPHNAENPEL CCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC PKGAPQPHEAPGSADKAKKSGG CCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]