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The map label for this gene is yiaD [C]

Identifier: 170750466

GI number: 170750466

Start: 4323484

End: 4324443

Strand: Reverse

Name: yiaD [C]

Synonym: Mrad2831_4073

Alternate gene names: 170750466

Gene position: 4324443-4323484 (Counterclockwise)

Preceding gene: 170750467

Following gene: 170750465

Centisome position: 71.15

GC content: 71.67

Gene sequence:

>960_bases
GTGAGAGCGCTGAAGCCTGTCTGTATCCTGCTGGCCCTCGCCTGCGCGGCGTCCGGGATCGGGGCCGATCCCGCGCGGGC
GCAGGACGCGGCGGCGGCGCCGAAGGCCTTCGCGCTCGATTCCGTTCCCGTCTCGGACGCGCCGCTCGGTCGCTTTCCCT
ACTTCGCGCTGCCCGACGGCTACCAGCCGGTGAACCCGCCCGAGACGCGGGAATTCGGGCATTTCCTGTTCTGGACCGGC
GCGGCGCTCCGCGAGGTCGAGGGCAAGGTCTTCCTGTCCCTGATCGGTCCCAAGGACGGCAAGACCTACGCCTCCTACGA
GCTGAGGAAGAACATCGAGGCGGTGCTGACCCAGGCCGGCGGCCGGAAGATCGCCGACGGCCGGATCCCCGACGCCGTGA
CCGAGACGCTGCCGGAGGACATCCGGGTCGGGATGTACGAGGGCCTGGGCAACGTCTACGGCGCGCCGGTGCAGACCTGG
GTGATCCGCCGCCCGGACCGGCAGATCTGGGTGCATTTCGTGCCCGACAGCAACGGCGCGGCCTGGACGATCCTCGAGAC
GAAGCCGTTCGTCCAGACCGCCGCCCTCCTGCCCGCCGAGCGGCTGAAGCAGGATCTCGACAAGACCGGGAAGGCGGTGA
TCCAGGTCAACTTCGCCACCGACAGGGCCGAGATCCTGCCGGCCTCCGCCCCGCAGATCGACGCGGTGGCGGCCCTGCTG
CGGACGGATCCCGGCCTGCGGCTCGCCATCAACGGCTACACGGACGGGACCGGGGCCGCCGCGCACAACCAAGCCCTGTC
CGACGGCCGCGCCAAGGCGGTCGTGGCGAGGCTCGTCGGCGCCGGCATCGCGAAGGACCGGCTGAGGGCCGAGGGCTTCG
GGGCCGCCAGCCCGGTCGCCTCCAACGACAGCGCGGCGGGGCGGGCGCAGAACCGGCGCGTCGAGCTGGTCAAGTTCTGA

Upstream 100 bases:

>100_bases
GATCGCGCGCGATGCCCCGGAGGCCGTAGGTCGGGCGACCTAATTGCCCGCCGATCCGCGCCCGCTATCGTCGCGCCTCC
GCAACGTTCCGGAGTGCGTC

Downstream 100 bases:

>100_bases
CGGGCGCGGATGGCGGGCGCCGCTCGACGCCGGTCTCGGACGGCCGATCCGGGCCCGCTCCGGCGCCTGAGCAGGGGACA
GCGCGATCGACAAGAGTATT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRALKPVCILLALACAASGIGADPARAQDAAAAPKAFALDSVPVSDAPLGRFPYFALPDGYQPVNPPETREFGHFLFWTG
AALREVEGKVFLSLIGPKDGKTYASYELRKNIEAVLTQAGGRKIADGRIPDAVTETLPEDIRVGMYEGLGNVYGAPVQTW
VIRRPDRQIWVHFVPDSNGAAWTILETKPFVQTAALLPAERLKQDLDKTGKAVIQVNFATDRAEILPASAPQIDAVAALL
RTDPGLRLAINGYTDGTGAAAHNQALSDGRAKAVVARLVGAGIAKDRLRAEGFGAASPVASNDSAAGRAQNRRVELVKF

Sequences:

>Translated_319_residues
MRALKPVCILLALACAASGIGADPARAQDAAAAPKAFALDSVPVSDAPLGRFPYFALPDGYQPVNPPETREFGHFLFWTG
AALREVEGKVFLSLIGPKDGKTYASYELRKNIEAVLTQAGGRKIADGRIPDAVTETLPEDIRVGMYEGLGNVYGAPVQTW
VIRRPDRQIWVHFVPDSNGAAWTILETKPFVQTAALLPAERLKQDLDKTGKAVIQVNFATDRAEILPASAPQIDAVAALL
RTDPGLRLAINGYTDGTGAAAHNQALSDGRAKAVVARLVGAGIAKDRLRAEGFGAASPVASNDSAAGRAQNRRVELVKF
>Mature_319_residues
MRALKPVCILLALACAASGIGADPARAQDAAAAPKAFALDSVPVSDAPLGRFPYFALPDGYQPVNPPETREFGHFLFWTG
AALREVEGKVFLSLIGPKDGKTYASYELRKNIEAVLTQAGGRKIADGRIPDAVTETLPEDIRVGMYEGLGNVYGAPVQTW
VIRRPDRQIWVHFVPDSNGAAWTILETKPFVQTAALLPAERLKQDLDKTGKAVIQVNFATDRAEILPASAPQIDAVAALL
RTDPGLRLAINGYTDGTGAAAHNQALSDGRAKAVVARLVGAGIAKDRLRAEGFGAASPVASNDSAAGRAQNRRVELVKF

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=103, Percent_Identity=40.7766990291262, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788957, Length=101, Percent_Identity=38.6138613861386, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33889; Mature: 33889

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALKPVCILLALACAASGIGADPARAQDAAAAPKAFALDSVPVSDAPLGRFPYFALPDG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCEEECCCC
YQPVNPPETREFGHFLFWTGAALREVEGKVFLSLIGPKDGKTYASYELRKNIEAVLTQAG
CCCCCCCCCHHHCCEEEECCHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCC
GRKIADGRIPDAVTETLPEDIRVGMYEGLGNVYGAPVQTWVIRRPDRQIWVHFVPDSNGA
CCEECCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
AWTILETKPFVQTAALLPAERLKQDLDKTGKAVIQVNFATDRAEILPASAPQIDAVAALL
EEEEEECCCHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCHHHHHHHHH
RTDPGLRLAINGYTDGTGAAAHNQALSDGRAKAVVARLVGAGIAKDRLRAEGFGAASPVA
HCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
SNDSAAGRAQNRRVELVKF
CCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRALKPVCILLALACAASGIGADPARAQDAAAAPKAFALDSVPVSDAPLGRFPYFALPDG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCCCCCCEEECCCC
YQPVNPPETREFGHFLFWTGAALREVEGKVFLSLIGPKDGKTYASYELRKNIEAVLTQAG
CCCCCCCCCHHHCCEEEECCHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCC
GRKIADGRIPDAVTETLPEDIRVGMYEGLGNVYGAPVQTWVIRRPDRQIWVHFVPDSNGA
CCEECCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
AWTILETKPFVQTAALLPAERLKQDLDKTGKAVIQVNFATDRAEILPASAPQIDAVAALL
EEEEEECCCHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCHHHHHHHHH
RTDPGLRLAINGYTDGTGAAAHNQALSDGRAKAVVARLVGAGIAKDRLRAEGFGAASPVA
HCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
SNDSAAGRAQNRRVELVKF
CCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]