| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750458
Identifier: 170750458
GI number: 170750458
Start: 4313150
End: 4314769
Strand: Reverse
Name: 170750458
Synonym: Mrad2831_4065
Alternate gene names: NA
Gene position: 4314769-4313150 (Counterclockwise)
Preceding gene: 170750459
Following gene: 170750457
Centisome position: 70.99
GC content: 75.37
Gene sequence:
>1620_bases GTGGGCAAGACCTTCCGGCAGTCGATGGCGTGGCTCCACGCCTGGTCGGGCCTCGTCGTCGGCTGGGTGCTGTTCGCCGT CTTCGTGACGGGCACGGCGAGCTACTACCGGCCGGAGATCTCGCAGTGGATGCGGCCCGAACTCCGCACCGACCGGACCT TCGGGCCGGCGGACCTCGCGGCGGCGGCCGAGCGCGGCGTCGCCTACGCTCAGGCCCATGCGGGCGGCGCGCGGACGTGG TTCCTCGCGCTGCCGCGGCCGGACAGGCCGGTGCTGGAGCTGTTCTGGCGGACGGGGCCGGGCCGCCCGCCCGGCCACGT CCTCCTGGATCCCGACAGCGGCGCGCCGGCGGCGGTGCGGGCGACGCGCGGCGGCGACTTCCTCTACCGCTTCCACTTCG AGCTGAACCTGCCGCCGCTCTGGGGCCGCTGGATCGTCGGCGCCTGCGCGATGATCATGCTGGTGGCGCTGATCTCGGGC CTCGTCACGCACCGGCGCATCTTCGCCGACTTCTTCACCTTCCGCCGGGACAAGTCCGCCCAGCGGGGCTGGCTCGACGC GCACAACGTCACGGGCGTCCTCGCCCTGCCGTTCCACCTGATGATCACCTATACCGGGCTCGCCACCCTCATGCTGATGT ACGTGCCCTGGGGCCTGCACGCGGCCTATCGCGGCGACAGCCAGCGCTACTTCGCCGAATCCGGCCAGATCACCGCGCCG CGCCCGCCCGCCGGTCAGCCCGGCACGCTGGCGCCGGTCGGGCCGCTGGTGGTCCGCGCGCTGGCGATGCGGCCGGAGCC CCTGGAGCGGATCACCATCGTCAACCCGAAGGACGCCAACGCCACGGTGGTGGCGGTGTTCGAGGAGCCGCACGGCCTCT CCCACGAGCATCCGCAGATCGCCTTCGACGGCGTGACGGGCGCGGTCCTGGAGGTGCGCGCGGGCGGCCTGCGGCCGGCG ACCAAGACGTTCACCGCGATGGTCGGCCTGCACGAGGCGCACTTCGCCGGCCCGGCCCTGCGGGTGCTGTTCTTCCTGTG CGGCGTGGCCGGCAGCGCCATGGTGGCGACCGGGCTGCTGCTCTGGGCCGTGGCGCGCCTGCCCAAGGGGGACGCGCCCG GGGGCTTCGGCCTGCGGCTCGTCCAGGGCCTGAACGTCGCCACGATCGCCGGCCTGCCCGCGGCCGTCGCCGCCTATTTC CTGGCCAACCGGCTCCTGCCGGCCGCGCTGCCCGCGCGGGCGGAGTGGGAGGTCGGGGCCTTCTTCGCCGTCTGGCTGCT CGTCGCCGCGGCGGCGCTCCTGCGCCCGGCCGGGCGGGTCTGGCCGGAGACGCTGACGGCGGCGGCCGCGTTGTACGGCG CCGTCGCGGCCGCGGATGTCGGACGCCTCGTCGCGCGCCGGATCGGCGGCGACGCGCCGGTCGAGCCGGTCTTCCTCGCC TTCGACGGCGCGATGCTGGCCCTCGCCGCCCTCTTCCTGCTCGCGGTCCGCACGATCGCGCGGCGCGGCGGAGCGTCCCG CGGCCCCGCGAAGGCCGCGGGGCTCTCGATCGCGGGGCACGCGCGGCGGGACCGGGCCCGGCCCGGCATGCCGGTACCGG GAGATCGTGAGCCGATATGA
Upstream 100 bases:
>100_bases GAGCGCTACGTGACCGGCTGCTTCACCTATTCGGGCTGCTATTACGGCCTGCCGCGCACGGTCTACGCGACCCTGCGCTA CCGCTGGTGAGGCGGCCGCC
Downstream 100 bases:
>100_bases TAAAATTGAACTGGTATATTGAACCCAGTGCGGCGAATTAGTTCAAAATAACTCCCGAAACCTGACATATATCGGATGCG CGTCGACTGTATCTGTGCAG
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Iron Uptake Protein; PepSY-Associated TM Helix Family Protein; Aspartate Kinase; PepSY-Associated Membrane Protein; Transmembrane Protein; Response Regulator Receiver Protein; Iron-Regulated Membrane Protein DUF; Transmembrane PepSY Domain-Containing Protein; PepSY Domain Protein; Pepsy-Associated Tm Helix DomaiN-Containing Protein; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MGKTFRQSMAWLHAWSGLVVGWVLFAVFVTGTASYYRPEISQWMRPELRTDRTFGPADLAAAAERGVAYAQAHAGGARTW FLALPRPDRPVLELFWRTGPGRPPGHVLLDPDSGAPAAVRATRGGDFLYRFHFELNLPPLWGRWIVGACAMIMLVALISG LVTHRRIFADFFTFRRDKSAQRGWLDAHNVTGVLALPFHLMITYTGLATLMLMYVPWGLHAAYRGDSQRYFAESGQITAP RPPAGQPGTLAPVGPLVVRALAMRPEPLERITIVNPKDANATVVAVFEEPHGLSHEHPQIAFDGVTGAVLEVRAGGLRPA TKTFTAMVGLHEAHFAGPALRVLFFLCGVAGSAMVATGLLLWAVARLPKGDAPGGFGLRLVQGLNVATIAGLPAAVAAYF LANRLLPAALPARAEWEVGAFFAVWLLVAAAALLRPAGRVWPETLTAAAALYGAVAAADVGRLVARRIGGDAPVEPVFLA FDGAMLALAALFLLAVRTIARRGGASRGPAKAAGLSIAGHARRDRARPGMPVPGDREPI
Sequences:
>Translated_539_residues MGKTFRQSMAWLHAWSGLVVGWVLFAVFVTGTASYYRPEISQWMRPELRTDRTFGPADLAAAAERGVAYAQAHAGGARTW FLALPRPDRPVLELFWRTGPGRPPGHVLLDPDSGAPAAVRATRGGDFLYRFHFELNLPPLWGRWIVGACAMIMLVALISG LVTHRRIFADFFTFRRDKSAQRGWLDAHNVTGVLALPFHLMITYTGLATLMLMYVPWGLHAAYRGDSQRYFAESGQITAP RPPAGQPGTLAPVGPLVVRALAMRPEPLERITIVNPKDANATVVAVFEEPHGLSHEHPQIAFDGVTGAVLEVRAGGLRPA TKTFTAMVGLHEAHFAGPALRVLFFLCGVAGSAMVATGLLLWAVARLPKGDAPGGFGLRLVQGLNVATIAGLPAAVAAYF LANRLLPAALPARAEWEVGAFFAVWLLVAAAALLRPAGRVWPETLTAAAALYGAVAAADVGRLVARRIGGDAPVEPVFLA FDGAMLALAALFLLAVRTIARRGGASRGPAKAAGLSIAGHARRDRARPGMPVPGDREPI >Mature_538_residues GKTFRQSMAWLHAWSGLVVGWVLFAVFVTGTASYYRPEISQWMRPELRTDRTFGPADLAAAAERGVAYAQAHAGGARTWF LALPRPDRPVLELFWRTGPGRPPGHVLLDPDSGAPAAVRATRGGDFLYRFHFELNLPPLWGRWIVGACAMIMLVALISGL VTHRRIFADFFTFRRDKSAQRGWLDAHNVTGVLALPFHLMITYTGLATLMLMYVPWGLHAAYRGDSQRYFAESGQITAPR PPAGQPGTLAPVGPLVVRALAMRPEPLERITIVNPKDANATVVAVFEEPHGLSHEHPQIAFDGVTGAVLEVRAGGLRPAT KTFTAMVGLHEAHFAGPALRVLFFLCGVAGSAMVATGLLLWAVARLPKGDAPGGFGLRLVQGLNVATIAGLPAAVAAYFL ANRLLPAALPARAEWEVGAFFAVWLLVAAAALLRPAGRVWPETLTAAAALYGAVAAADVGRLVARRIGGDAPVEPVFLAF DGAMLALAALFLLAVRTIARRGGASRGPAKAAGLSIAGHARRDRARPGMPVPGDREPI
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57559; Mature: 57428
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTFRQSMAWLHAWSGLVVGWVLFAVFVTGTASYYRPEISQWMRPELRTDRTFGPADLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHCCCHHCCCCCCCHHHHH AAAERGVAYAQAHAGGARTWFLALPRPDRPVLELFWRTGPGRPPGHVLLDPDSGAPAAVR HHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCEEE ATRGGDFLYRFHFELNLPPLWGRWIVGACAMIMLVALISGLVTHRRIFADFFTFRRDKSA ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QRGWLDAHNVTGVLALPFHLMITYTGLATLMLMYVPWGLHAAYRGDSQRYFAESGQITAP HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCCEECC RPPAGQPGTLAPVGPLVVRALAMRPEPLERITIVNPKDANATVVAVFEEPHGLSHEHPQI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCE AFDGVTGAVLEVRAGGLRPATKTFTAMVGLHEAHFAGPALRVLFFLCGVAGSAMVATGLL EECCCCCEEHEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH LWAVARLPKGDAPGGFGLRLVQGLNVATIAGLPAAVAAYFLANRLLPAALPARAEWEVGA HHHHHHCCCCCCCCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH FFAVWLLVAAAALLRPAGRVWPETLTAAAALYGAVAAADVGRLVARRIGGDAPVEPVFLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FDGAMLALAALFLLAVRTIARRGGASRGPAKAAGLSIAGHARRDRARPGMPVPGDREPI ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GKTFRQSMAWLHAWSGLVVGWVLFAVFVTGTASYYRPEISQWMRPELRTDRTFGPADLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHCCCHHCCCCCCCHHHHH AAAERGVAYAQAHAGGARTWFLALPRPDRPVLELFWRTGPGRPPGHVLLDPDSGAPAAVR HHHHCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCEEE ATRGGDFLYRFHFELNLPPLWGRWIVGACAMIMLVALISGLVTHRRIFADFFTFRRDKSA ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QRGWLDAHNVTGVLALPFHLMITYTGLATLMLMYVPWGLHAAYRGDSQRYFAESGQITAP HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCCEECC RPPAGQPGTLAPVGPLVVRALAMRPEPLERITIVNPKDANATVVAVFEEPHGLSHEHPQI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCE AFDGVTGAVLEVRAGGLRPATKTFTAMVGLHEAHFAGPALRVLFFLCGVAGSAMVATGLL EECCCCCEEHEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH LWAVARLPKGDAPGGFGLRLVQGLNVATIAGLPAAVAAYFLANRLLPAALPARAEWEVGA HHHHHHCCCCCCCCCCHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH FFAVWLLVAAAALLRPAGRVWPETLTAAAALYGAVAAADVGRLVARRIGGDAPVEPVFLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE FDGAMLALAALFLLAVRTIARRGGASRGPAKAAGLSIAGHARRDRARPGMPVPGDREPI ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA