| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fct [H]
Identifier: 170750459
GI number: 170750459
Start: 4314780
End: 4317137
Strand: Reverse
Name: fct [H]
Synonym: Mrad2831_4066
Alternate gene names: 170750459
Gene position: 4317137-4314780 (Counterclockwise)
Preceding gene: 170750462
Following gene: 170750458
Centisome position: 71.03
GC content: 69.59
Gene sequence:
>2358_bases ATGTCGAGATCTGTTGGCGGGCTGACCGCGTCGCGCGCGTACGATCATGCGGAGAGGCTGCTCCGGATCGGGTTTGTATC GTCGACATCTCTGCTCGCCCTCGGAACGGCCGCGATCGCCCAGCCCGCGCCCGTCCCGCCCGCGCCCGCCACGGACATCG AACTGTCCGAACTGAGCGTGATGGGCGAGGCGCGCGGGCGCAGCCTGAACAGCGATCTGTACGGGCGCGGCGGGGCGACC GGGCCGGTGCCCGGCTACGTCGCCAGCCGCAGCACGGTCGGCACGAAGACCGACACGCCGATCCTGGAGACGGCGCAGTC GGTGTCGGTCATCGGGCGCCAGCAGATCGAGGACCAGAACGCCCTGACCATCAACCAAGCGCTGCGCTTCACGCCGAGCG TCACCACCGAGCAGCGGGGCGGCGCCGGCTCGACGCGCCTGGAGCAGTTCTACATCCGCGGCTTCACCGCGCCGATCTTC CTCGACAACATGGCGCTGCCCACGAACCGCGACGCCTTCCCCAGCGTCGATCCCTACCGCCTGGAGCGGGTCGACATCAT CAAGGGGCCGGCCTCGGTCCTCTACGGGCAGTCCGGTCCGGGCGGCCTCGTCAACCTCGTCTCGAAGGTCCCGCAATTCG TCCGCCACGGCGAGATCTTCGTCCAGGGCGGCGGCTTCAGCGAGGTCCGCGGCGGCTTCGACGTCGGCGGGCCGATCCAA TCCGACATCCCCGGCCTCGCCGACCAGTTCGCCTACCGGGTCATCGGCCTCGGCTGGAACGGCGACGGGCCGGCCGTGAC CACCAAGGTCGAGCGCGCCTTCATCAATCCGAGCCTCACGTGGCGGCCCTCCGCCGACACCTCGCTCACCATCATCGCCA ACTACCAGCGCGACCCGTTCTCGGGCTTCTACGGCGGCTTCCCGGCCGTCGGCACGGTGTTCCCGCGCAGCTTCGGCAAC GGCGTCTTCGGCCGGCTGCCGGTGAACTTCTACGACGGCGACCGCAACATCGAGCGCTCCGACCGCACCCAGGCCTCCAT CGAGTACCTGTTCGACCACCGGATCACCGAGAACCTGCGCTTCCACTCGGCCGGCCGCTACCTGCGCTCGAACGGCGACT ACCGCAGCGTGTTCACGACCTTCGGCGACGTCAACGGCCCGTACACGAGCGGCCCGATCATCGGCCGCTCGGTCGGCGGC ACCCAGGTCGATATCGAAGCCTACACGATGGACAACAACTTCATCGCCGATTTCGACACCGGCCCGATCGCCCACACGGC GCTGCTCGGCGTCGACCACCGGACCTTCAGCACGCGGTCCGTCACCGGCCCGTTCCCGGCGACGACGAGCCTGAACGCCC TCGCCCCCGACCACGACCTGCCGATCCGGTTCCCCGCCTTCACGTCGACCTCGCGGATCGACGCGCAGCAGACCGGCGTG TACTTCCAGGATCAGGCGAAGTTCGACCGCTTCATCCTGACGCTCGGCGGCCGCTACGACACCGCCCGGCAGACCGGCCC GACCCGCACCTTCGCGCCGAACGGGCTCACCATCCAGGACGTGCCGGCCGAGGCCTTCACCGGCCGCGCCAGCCTGCTCT ACCTGTTCGACAGCGGTGTCGCCCCGTACGTCTCCTACAGCGAGGCGTTCGAGCCGATCGTCAACGGGCGGATCTTCGAC ACGGCCTTCGGCTCGGCCGGGCGCATCCCGGTCCCGATCGCCAGCAACCAGTACGAGGCCGGCATCAAGTACCAGCCCCC CGGCACCGACATCCTGCTGACCACCGCGTTCTTCGACATCCGCCGCTCGAACGCGACCACCACGGACCCGGTCAATCCCG GCTTCGTCGTGCAGACCGGCGAGGTCGGCGTGCAGGGCGTCGAGTTCGAGGCGCGGGCCACCCTCGCCGAGGGCCTCAGC CTGATCGGCGGCTTCTCGCTCCTCGACATCCGCAACGTCCGCGACACCGGCTTCACCACGAACGACCTGACCCGCCGGCA GGTGCCGCTCCAGGGCCTGCGGCCGGTGCAGGTGCCGGACACGACGGCCTCGCTGTTCGTCGACTACCGCTTCACCAGCG GCCCGCTGCTCGGCCTCGGCCTCGGCGGCGGCGTGCGCTACCTCGGCCCATCCTGGGGCGATCCGGCCAACACCTTCCAG GTGCCCGAGAGCGTGCTGGTCGACGCCGTCGCCTCCTACGACATGAAGCATCTCGACCCGCGGCTGACGGGGCTCACGGC GCAGATCAACGTGCAGAACCTGCTCGACGAGCGCTACGTGACCGGCTGCTTCACCTATTCGGGCTGCTATTACGGCCTGC CGCGCACGGTCTACGCGACCCTGCGCTACCGCTGGTGA
Upstream 100 bases:
>100_bases TCTGGAATATGTGTCTTCGGGGGCACATTCCGCTCACGGATCCGTGATAGCTGGGACTCGGAGCCTATTCGCCCAGTATT TGTAGTTTAGAGTCGGTGTA
Downstream 100 bases:
>100_bases GGCGGCCGCCGTGGGCAAGACCTTCCGGCAGTCGATGGCGTGGCTCCACGCCTGGTCGGGCCTCGTCGTCGGCTGGGTGC TGTTCGCCGTCTTCGTGACG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 785; Mature: 784
Protein sequence:
>785_residues MSRSVGGLTASRAYDHAERLLRIGFVSSTSLLALGTAAIAQPAPVPPAPATDIELSELSVMGEARGRSLNSDLYGRGGAT GPVPGYVASRSTVGTKTDTPILETAQSVSVIGRQQIEDQNALTINQALRFTPSVTTEQRGGAGSTRLEQFYIRGFTAPIF LDNMALPTNRDAFPSVDPYRLERVDIIKGPASVLYGQSGPGGLVNLVSKVPQFVRHGEIFVQGGGFSEVRGGFDVGGPIQ SDIPGLADQFAYRVIGLGWNGDGPAVTTKVERAFINPSLTWRPSADTSLTIIANYQRDPFSGFYGGFPAVGTVFPRSFGN GVFGRLPVNFYDGDRNIERSDRTQASIEYLFDHRITENLRFHSAGRYLRSNGDYRSVFTTFGDVNGPYTSGPIIGRSVGG TQVDIEAYTMDNNFIADFDTGPIAHTALLGVDHRTFSTRSVTGPFPATTSLNALAPDHDLPIRFPAFTSTSRIDAQQTGV YFQDQAKFDRFILTLGGRYDTARQTGPTRTFAPNGLTIQDVPAEAFTGRASLLYLFDSGVAPYVSYSEAFEPIVNGRIFD TAFGSAGRIPVPIASNQYEAGIKYQPPGTDILLTTAFFDIRRSNATTTDPVNPGFVVQTGEVGVQGVEFEARATLAEGLS LIGGFSLLDIRNVRDTGFTTNDLTRRQVPLQGLRPVQVPDTTASLFVDYRFTSGPLLGLGLGGGVRYLGPSWGDPANTFQ VPESVLVDAVASYDMKHLDPRLTGLTAQINVQNLLDERYVTGCFTYSGCYYGLPRTVYATLRYRW
Sequences:
>Translated_785_residues MSRSVGGLTASRAYDHAERLLRIGFVSSTSLLALGTAAIAQPAPVPPAPATDIELSELSVMGEARGRSLNSDLYGRGGAT GPVPGYVASRSTVGTKTDTPILETAQSVSVIGRQQIEDQNALTINQALRFTPSVTTEQRGGAGSTRLEQFYIRGFTAPIF LDNMALPTNRDAFPSVDPYRLERVDIIKGPASVLYGQSGPGGLVNLVSKVPQFVRHGEIFVQGGGFSEVRGGFDVGGPIQ SDIPGLADQFAYRVIGLGWNGDGPAVTTKVERAFINPSLTWRPSADTSLTIIANYQRDPFSGFYGGFPAVGTVFPRSFGN GVFGRLPVNFYDGDRNIERSDRTQASIEYLFDHRITENLRFHSAGRYLRSNGDYRSVFTTFGDVNGPYTSGPIIGRSVGG TQVDIEAYTMDNNFIADFDTGPIAHTALLGVDHRTFSTRSVTGPFPATTSLNALAPDHDLPIRFPAFTSTSRIDAQQTGV YFQDQAKFDRFILTLGGRYDTARQTGPTRTFAPNGLTIQDVPAEAFTGRASLLYLFDSGVAPYVSYSEAFEPIVNGRIFD TAFGSAGRIPVPIASNQYEAGIKYQPPGTDILLTTAFFDIRRSNATTTDPVNPGFVVQTGEVGVQGVEFEARATLAEGLS LIGGFSLLDIRNVRDTGFTTNDLTRRQVPLQGLRPVQVPDTTASLFVDYRFTSGPLLGLGLGGGVRYLGPSWGDPANTFQ VPESVLVDAVASYDMKHLDPRLTGLTAQINVQNLLDERYVTGCFTYSGCYYGLPRTVYATLRYRW >Mature_784_residues SRSVGGLTASRAYDHAERLLRIGFVSSTSLLALGTAAIAQPAPVPPAPATDIELSELSVMGEARGRSLNSDLYGRGGATG PVPGYVASRSTVGTKTDTPILETAQSVSVIGRQQIEDQNALTINQALRFTPSVTTEQRGGAGSTRLEQFYIRGFTAPIFL DNMALPTNRDAFPSVDPYRLERVDIIKGPASVLYGQSGPGGLVNLVSKVPQFVRHGEIFVQGGGFSEVRGGFDVGGPIQS DIPGLADQFAYRVIGLGWNGDGPAVTTKVERAFINPSLTWRPSADTSLTIIANYQRDPFSGFYGGFPAVGTVFPRSFGNG VFGRLPVNFYDGDRNIERSDRTQASIEYLFDHRITENLRFHSAGRYLRSNGDYRSVFTTFGDVNGPYTSGPIIGRSVGGT QVDIEAYTMDNNFIADFDTGPIAHTALLGVDHRTFSTRSVTGPFPATTSLNALAPDHDLPIRFPAFTSTSRIDAQQTGVY FQDQAKFDRFILTLGGRYDTARQTGPTRTFAPNGLTIQDVPAEAFTGRASLLYLFDSGVAPYVSYSEAFEPIVNGRIFDT AFGSAGRIPVPIASNQYEAGIKYQPPGTDILLTTAFFDIRRSNATTTDPVNPGFVVQTGEVGVQGVEFEARATLAEGLSL IGGFSLLDIRNVRDTGFTTNDLTRRQVPLQGLRPVQVPDTTASLFVDYRFTSGPLLGLGLGGGVRYLGPSWGDPANTFQV PESVLVDAVASYDMKHLDPRLTGLTAQINVQNLLDERYVTGCFTYSGCYYGLPRTVYATLRYRW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=732, Percent_Identity=34.2896174863388, Blast_Score=380, Evalue=1e-106, Organism=Escherichia coli, GI1787344, Length=802, Percent_Identity=23.8154613466334, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1787024, Length=745, Percent_Identity=24.6979865771812, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84837; Mature: 84706
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSVGGLTASRAYDHAERLLRIGFVSSTSLLALGTAAIAQPAPVPPAPATDIELSELSV CCCCCCCCHHHHHHHHHHHHHHHEECCCCCCEEECHHHHCCCCCCCCCCCCCCCHHHHHH MGEARGRSLNSDLYGRGGATGPVPGYVASRSTVGTKTDTPILETAQSVSVIGRQQIEDQN HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC ALTINQALRFTPSVTTEQRGGAGSTRLEQFYIRGFTAPIFLDNMALPTNRDAFPSVDPYR CEEEEHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCE LERVDIIKGPASVLYGQSGPGGLVNLVSKVPQFVRHGEIFVQGGGFSEVRGGFDVGGPIQ EEEEEEECCCHHHEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCH SDIPGLADQFAYRVIGLGWNGDGPAVTTKVERAFINPSLTWRPSADTSLTIIANYQRDPF HCCCCHHHHHEEEEEEECCCCCCCEEEEEEHHHCCCCCEEECCCCCCEEEEEEECCCCCC SGFYGGFPAVGTVFPRSFGNGVFGRLPVNFYDGDRNIERSDRTQASIEYLFDHRITENLR CCCCCCCCCHHHHCCHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCE FHSAGRYLRSNGDYRSVFTTFGDVNGPYTSGPIIGRSVGGTQVDIEAYTMDNNFIADFDT ECCCCCHHHCCCCEEEHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCEEEECCC GPIAHTALLGVDHRTFSTRSVTGPFPATTSLNALAPDHDLPIRFPAFTSTSRIDAQQTGV CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCC YFQDQAKFDRFILTLGGRYDTARQTGPTRTFAPNGLTIQDVPAEAFTGRASLLYLFDSGV EEECCCCCCEEEEEECCCCCCHHCCCCCCEECCCCCEEEECCHHHHCCCEEEEEEEECCC APYVSYSEAFEPIVNGRIFDTAFGSAGRIPVPIASNQYEAGIKYQPPGTDILLTTAFFDI CCCEEHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEH RRSNATTTDPVNPGFVVQTGEVGVQGVEFEARATLAEGLSLIGGFSLLDIRNVRDTGFTT HCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC NDLTRRQVPLQGLRPVQVPDTTASLFVDYRFTSGPLLGLGLGGGVRYLGPSWGDPANTFQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEEECCCCCCCCCCCCC VPESVLVDAVASYDMKHLDPRLTGLTAQINVQNLLDERYVTGCFTYSGCYYGLPRTVYAT CCHHHHHHHHHHCCHHHCCCCCCCEEEEEEHHHHHHHHHEEEEEEECCEEECCCCEEEEE LRYRW EEECC >Mature Secondary Structure SRSVGGLTASRAYDHAERLLRIGFVSSTSLLALGTAAIAQPAPVPPAPATDIELSELSV CCCCCCCHHHHHHHHHHHHHHHEECCCCCCEEECHHHHCCCCCCCCCCCCCCCHHHHHH MGEARGRSLNSDLYGRGGATGPVPGYVASRSTVGTKTDTPILETAQSVSVIGRQQIEDQN HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC ALTINQALRFTPSVTTEQRGGAGSTRLEQFYIRGFTAPIFLDNMALPTNRDAFPSVDPYR CEEEEHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCE LERVDIIKGPASVLYGQSGPGGLVNLVSKVPQFVRHGEIFVQGGGFSEVRGGFDVGGPIQ EEEEEEECCCHHHEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCH SDIPGLADQFAYRVIGLGWNGDGPAVTTKVERAFINPSLTWRPSADTSLTIIANYQRDPF HCCCCHHHHHEEEEEEECCCCCCCEEEEEEHHHCCCCCEEECCCCCCEEEEEEECCCCCC SGFYGGFPAVGTVFPRSFGNGVFGRLPVNFYDGDRNIERSDRTQASIEYLFDHRITENLR CCCCCCCCCHHHHCCHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCE FHSAGRYLRSNGDYRSVFTTFGDVNGPYTSGPIIGRSVGGTQVDIEAYTMDNNFIADFDT ECCCCCHHHCCCCEEEHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCEEEECCC GPIAHTALLGVDHRTFSTRSVTGPFPATTSLNALAPDHDLPIRFPAFTSTSRIDAQQTGV CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCC YFQDQAKFDRFILTLGGRYDTARQTGPTRTFAPNGLTIQDVPAEAFTGRASLLYLFDSGV EEECCCCCCEEEEEECCCCCCHHCCCCCCEECCCCCEEEECCHHHHCCCEEEEEEEECCC APYVSYSEAFEPIVNGRIFDTAFGSAGRIPVPIASNQYEAGIKYQPPGTDILLTTAFFDI CCCEEHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEH RRSNATTTDPVNPGFVVQTGEVGVQGVEFEARATLAEGLSLIGGFSLLDIRNVRDTGFTT HCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC NDLTRRQVPLQGLRPVQVPDTTASLFVDYRFTSGPLLGLGLGGGVRYLGPSWGDPANTFQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEEECCCCCCCCCCCCC VPESVLVDAVASYDMKHLDPRLTGLTAQINVQNLLDERYVTGCFTYSGCYYGLPRTVYAT CCHHHHHHHHHHCCHHHCCCCCCCEEEEEEHHHHHHHHHEEEEEEECCEEECCCCEEEEE LRYRW EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]