| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is yhhG [C]
Identifier: 170750457
GI number: 170750457
Start: 4312356
End: 4312799
Strand: Reverse
Name: yhhG [C]
Synonym: Mrad2831_4064
Alternate gene names: 170750457
Gene position: 4312799-4312356 (Counterclockwise)
Preceding gene: 170750458
Following gene: 170750456
Centisome position: 70.96
GC content: 75.45
Gene sequence:
>444_bases ATGCAGCGCATCACCATCACCATCGACGACGCCCTGCTGACGGCGGTCGACGACCTCTGCGCGCGGCGCGGCTACGGCAG CCGCTCGGAGGCGGTGCGCGACATCGTCCGCGACGCCCTGGCGCCGGCCCGCGCCGCGGAGACCGGCGGATCGGGGGCCT GCTACGGGGCCCTGAGCTACGTCTACAGCCACGGCACCCGCGACCTGGCCCGCCGGCTGACCGGCGAGGGGCATGAGCAC GGCGTCTCGATCGCCAGCCTGCACGTGCACCTGAACCACGACGCGTGCCTCGAGGTGGCGGTGCTGCGCGGGCCGCCGGC CCGGATGCAGAGCTACGCCGACGCCGTCGTCACGCAGCGCGGCGTCCGCTACGGCCACCTGCACCTCATCCCCGAGGGCG ACGACGCGCCGACCCGTCCGGGCCACGGCGACGGCCCGGAGTGA
Upstream 100 bases:
>100_bases TCGAGGCTCTTTTTCTGCCGCGCCGGCCGATGGGTCCCCGGCGGCTGTTCACGGACCCCGCGTCCCCGTACCAGAAGGCC ACGGGAGCGGCAGGACGGGC
Downstream 100 bases:
>100_bases GGGCCGCGCCCGGACGGCGTCCCGAGGGCGGTTCGACTGCGCCCCGCGGGCAACACGACCGCGCCGATCCGCCGGTGTGA ATTTTTCGTATGTTTATCAT
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSYVYSHGTRDLARRLTGEGHEH GVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQRGVRYGHLHLIPEGDDAPTRPGHGDGPE
Sequences:
>Translated_147_residues MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSYVYSHGTRDLARRLTGEGHEH GVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQRGVRYGHLHLIPEGDDAPTRPGHGDGPE >Mature_147_residues MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSYVYSHGTRDLARRLTGEGHEH GVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQRGVRYGHLHLIPEGDDAPTRPGHGDGPE
Specific function: Transcriptional regulator (Potential) [H]
COG id: COG0864
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]
Homologues:
Organism=Escherichia coli, GI1789892, Length=135, Percent_Identity=53.3333333333333, Blast_Score=130, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013321 - InterPro: IPR002145 - InterPro: IPR022988 - InterPro: IPR014160 - InterPro: IPR010985 - InterPro: IPR014864 [H]
Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]
EC number: NA
Molecular weight: Translated: 15676; Mature: 15676
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSY CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHH VYSHGTRDLARRLTGEGHEHGVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQR HHHCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHC GVRYGHLHLIPEGDDAPTRPGHGDGPE CCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQRITITIDDALLTAVDDLCARRGYGSRSEAVRDIVRDALAPARAAETGGSGACYGALSY CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHH VYSHGTRDLARRLTGEGHEHGVSIASLHVHLNHDACLEVAVLRGPPARMQSYADAVVTQR HHHCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHC GVRYGHLHLIPEGDDAPTRPGHGDGPE CCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA