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The map label for this gene is ybeQ [H]

Identifier: 170750423

GI number: 170750423

Start: 4271529

End: 4272434

Strand: Reverse

Name: ybeQ [H]

Synonym: Mrad2831_4028

Alternate gene names: 170750423

Gene position: 4272434-4271529 (Counterclockwise)

Preceding gene: 170750424

Following gene: 170750422

Centisome position: 70.3

GC content: 71.3

Gene sequence:

>906_bases
ATGCGCGCGACATCCATCGTTTCCATGACGCTGGCGCTCTCGGTCCTGTCCGGACTGGGCGCCCGGGCGGAGACCGCCCG
GAGCGCCTCCGCGACGCTGGCCACCGGCGCCAGCGCTGCCGCGATGTACAATCTCGGGATCCTCTACATCAACGGCCAGG
GCGTGAAGCAGGATTTCGGCACGGCCGGACGCTGGTTCGAGAAGTCCGCCGCCGGCGGCGACGTCGATGCCATGCTCAAC
CTCGGCAGCCTGTACTACAACGGGCAGGGCGTGAAGCAGGATTACGCCGCCGCGGCCGCGTGGTTCGAGAAGGCCGCCCG
CGCCGGCAACGCCGAGGCCATGAACAACCTCGGCAGCCTCTACGATGCCGGCCAGGGCGTGGCGCAGGACTACGCCGCCG
CCCGCAGCTGGTACGAGAAGGCCGCGGCCGCCGGTGCCGCGTCGGCCATGTACAATCTCGGGCTTCTCTACACCAACGGT
CAGGGTGTCGGGCAGGATTACGGCGCGGCCGCCTCCTGGTTCGGGAAGGCCGCCGCCGGCGGCAACGTCGACGCGATGAA
CGCCCTCGGCAGCCTGCACCTCAACGGTCTGGGCGTGAAGCCGGACGCCCCCGCGGCCCGCCGCTGGTTCGAGAAGGCGG
TCGCCGGCGGCAACGTGGACGCGATGAACAACCTCGGCAGCCTCTACCTGAACGGCCAGGGCGTGAAGCCGGACGACGCC
GCGGCCCGCCGCTGGTTCGAGAAGGCGGCCGCCGCCGGCCACGCGGAGGCGATGAACAATCTCGGCTTCCTCTACCTCAA
CGGTCGCGGGGTGAAGCAGGATTTCGACGCCGCCCGGCGGTGGTTCGAGAAGGCCGCCGGCGGGGCCGCGGCCGCGGGCG
TCCCCGGAGACATCGCGCTCCGCTAG

Upstream 100 bases:

>100_bases
ACAAGGTTCTGAAAGACGCCATCAGCATTGCGGAAGATGCTCGGGATAGGCTTCCGCGCAGGGCATGACGGTTCGCGTGC
CCGCACAGGGATTCACGGCC

Downstream 100 bases:

>100_bases
GGCAATGCGACGGCGGGGTCGCGGTCGAGACGCGCACCTGTCATGCCGGCGGGCGCGGTCCCAAGCGGGCCCGATGGGGC
GAGGATGCGGCGCGGGTGGC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRATSIVSMTLALSVLSGLGARAETARSASATLATGASAAAMYNLGILYINGQGVKQDFGTAGRWFEKSAAGGDVDAMLN
LGSLYYNGQGVKQDYAAAAAWFEKAARAGNAEAMNNLGSLYDAGQGVAQDYAAARSWYEKAAAAGAASAMYNLGLLYTNG
QGVGQDYGAAASWFGKAAAGGNVDAMNALGSLHLNGLGVKPDAPAARRWFEKAVAGGNVDAMNNLGSLYLNGQGVKPDDA
AARRWFEKAAAAGHAEAMNNLGFLYLNGRGVKQDFDAARRWFEKAAGGAAAAGVPGDIALR

Sequences:

>Translated_301_residues
MRATSIVSMTLALSVLSGLGARAETARSASATLATGASAAAMYNLGILYINGQGVKQDFGTAGRWFEKSAAGGDVDAMLN
LGSLYYNGQGVKQDYAAAAAWFEKAARAGNAEAMNNLGSLYDAGQGVAQDYAAARSWYEKAAAAGAASAMYNLGLLYTNG
QGVGQDYGAAASWFGKAAAGGNVDAMNALGSLHLNGLGVKPDAPAARRWFEKAVAGGNVDAMNNLGSLYLNGQGVKPDDA
AARRWFEKAAAAGHAEAMNNLGFLYLNGRGVKQDFDAARRWFEKAAGGAAAAGVPGDIALR
>Mature_301_residues
MRATSIVSMTLALSVLSGLGARAETARSASATLATGASAAAMYNLGILYINGQGVKQDFGTAGRWFEKSAAGGDVDAMLN
LGSLYYNGQGVKQDYAAAAAWFEKAARAGNAEAMNNLGSLYDAGQGVAQDYAAARSWYEKAAAAGAASAMYNLGLLYTNG
QGVGQDYGAAASWFGKAAAGGNVDAMNALGSLHLNGLGVKPDAPAARRWFEKAVAGGNVDAMNNLGSLYLNGQGVKPDDA
AARRWFEKAAAAGHAEAMNNLGFLYLNGRGVKQDFDAARRWFEKAAGGAAAAGVPGDIALR

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=265, Percent_Identity=32.8301886792453, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI151301150, Length=300, Percent_Identity=29.6666666666667, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI154689719, Length=173, Percent_Identity=35.8381502890173, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI87081769, Length=254, Percent_Identity=36.2204724409449, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1786867, Length=153, Percent_Identity=34.640522875817, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17563256, Length=261, Percent_Identity=27.9693486590038, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355295, Length=261, Percent_Identity=31.4176245210728, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 30842; Mature: 30842

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATSIVSMTLALSVLSGLGARAETARSASATLATGASAAAMYNLGILYINGQGVKQDFG
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCHHHHC
TAGRWFEKSAAGGDVDAMLNLGSLYYNGQGVKQDYAAAAAWFEKAARAGNAEAMNNLGSL
CCHHHHHHCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YDAGQGVAQDYAAARSWYEKAAAAGAASAMYNLGLLYTNGQGVGQDYGAAASWFGKAAAG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHCCC
GNVDAMNALGSLHLNGLGVKPDAPAARRWFEKAVAGGNVDAMNNLGSLYLNGQGVKPDDA
CCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCHH
AARRWFEKAAAAGHAEAMNNLGFLYLNGRGVKQDFDAARRWFEKAAGGAAAAGVPGDIAL
HHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
R
C
>Mature Secondary Structure
MRATSIVSMTLALSVLSGLGARAETARSASATLATGASAAAMYNLGILYINGQGVKQDFG
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCHHHHC
TAGRWFEKSAAGGDVDAMLNLGSLYYNGQGVKQDYAAAAAWFEKAARAGNAEAMNNLGSL
CCHHHHHHCCCCCCHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
YDAGQGVAQDYAAARSWYEKAAAAGAASAMYNLGLLYTNGQGVGQDYGAAASWFGKAAAG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHCCC
GNVDAMNALGSLHLNGLGVKPDAPAARRWFEKAVAGGNVDAMNNLGSLYLNGQGVKPDDA
CCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCHH
AARRWFEKAAAAGHAEAMNNLGFLYLNGRGVKQDFDAARRWFEKAAGGAAAAGVPGDIAL
HHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]