| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750417
Identifier: 170750417
GI number: 170750417
Start: 4267114
End: 4268328
Strand: Direct
Name: 170750417
Synonym: Mrad2831_4022
Alternate gene names: NA
Gene position: 4267114-4268328 (Clockwise)
Preceding gene: 170750416
Following gene: 170750418
Centisome position: 70.21
GC content: 69.55
Gene sequence:
>1215_bases ATGGCGTTGATCCGGAGCTGCGTCCTCTCGGTCGCGATCGGCATCGCCGTGCTCGCCGGACCGGCCGCCGCCGAGCCGAT CCGCGTCAAGGTCGGCGTCCTCAACGACATGTCGGGCGTCTACGCCGATACCGGCGGCAAGGGCTCCGTCGTCGCCGCGC AGATGGCGGTCGAGGATTTCGCCAAGACCAGCCCGGACGTGCAGGTCGAGATCGTCTCGGCCGACCACCAGAACAAGCCC GACGTCGGCGCCGCCGTCGCCCGCCAGTGGTACGACCGCGACGGCGTGGACGCGATCCTCGACGTGCCGACCTCCTCGGT GGCGCTGGCGGTGAGCCAGGTCACCCGCGAGAAGAACAAGATCTTCATCGACTCGGGGGCCGGCACCACGGAGCTGACCG GCAAGCAATGCTCGCCGAACACGATCCAGTGGACCTACGACACCTACGCCCTCGCGCACGGCACGGCCGGCGCCATGCTC AAGCGCGGCGGCGACACGTGGTACTTCCTCACCGCCGACTACGCGTTCGGCCTCTCCCTGCAGAACGAGGCGAAGGCCGT GATCGACGCGGGCGGCGGGCGGGTGCTGGGCGCCGCCCGAGTCCCGTTCCCCGCCACGGACTTCTCCTCGTTCCTGCTGC AGGCGCAGGCCTCGGGCGCGAAGGTGGTGGGTCTGGCCAACGCGGGTGGCGACACGGTCAACGCGGTCAAGCAGGCGCAC GAGTTCGGGCTGACCGACGGCGGCCAAAAGCTCGCCGCCCTGCTGATCTACGCCGTTGACGTCCACGCGATCGGCCTGCA GACCGCGCAGGGGCTGGTGCTGACCGAGTCGTTCTACTGGGATCTCAACCCGGAGACGCGGGCCTTCTCGGAGCGCTTCT ACCCGCGCAACGGCAACACCATGCCGACGATGAACCATGCGGGCGTCTATGCCGGGCTCCTGCACTACCTGAAGGCCGTG GCGGCCACGAAGTCCACGGACCCGCAGAAGACCATGGCGTGGATGAAGGCCAACCCGACCGACGACCCGCTGTTCGGCAA GGGCGTCGTCCGGGCGGACGGCCGCAAGATCCACCCGATGTACCTGTTCGCCGTGAAGGCGCCGTCCGAGTCGAAGGGTC CGTGGGACCTCTACGAGCTCCTCGACACGATCCCCGCCGAGCAGGCCTTCCGCCCCCTGGCCGAGGGCGGCTGCCCGCTC GTCGCCAAGCCGTAG
Upstream 100 bases:
>100_bases TCGCCGGCCCCGGATCCGGTCGCGGACCGGCGCTTGACGCTGGGATGCCAGCGTGCCCTCCTGGCCGAAAGACAGAACCA TTCGCGGAGGACGGCCCACG
Downstream 100 bases:
>100_bases GGACGGGGCCGAAAGCCATGATGCGCGCGCTCGAAGGGCAGGTCGCCTGGGTGACGGGGGCCGGATCCGGCATCGGGCAG GCGGCCGCCCTGGCGCTGGC
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MALIRSCVLSVAIGIAVLAGPAAAEPIRVKVGVLNDMSGVYADTGGKGSVVAAQMAVEDFAKTSPDVQVEIVSADHQNKP DVGAAVARQWYDRDGVDAILDVPTSSVALAVSQVTREKNKIFIDSGAGTTELTGKQCSPNTIQWTYDTYALAHGTAGAML KRGGDTWYFLTADYAFGLSLQNEAKAVIDAGGGRVLGAARVPFPATDFSSFLLQAQASGAKVVGLANAGGDTVNAVKQAH EFGLTDGGQKLAALLIYAVDVHAIGLQTAQGLVLTESFYWDLNPETRAFSERFYPRNGNTMPTMNHAGVYAGLLHYLKAV AATKSTDPQKTMAWMKANPTDDPLFGKGVVRADGRKIHPMYLFAVKAPSESKGPWDLYELLDTIPAEQAFRPLAEGGCPL VAKP
Sequences:
>Translated_404_residues MALIRSCVLSVAIGIAVLAGPAAAEPIRVKVGVLNDMSGVYADTGGKGSVVAAQMAVEDFAKTSPDVQVEIVSADHQNKP DVGAAVARQWYDRDGVDAILDVPTSSVALAVSQVTREKNKIFIDSGAGTTELTGKQCSPNTIQWTYDTYALAHGTAGAML KRGGDTWYFLTADYAFGLSLQNEAKAVIDAGGGRVLGAARVPFPATDFSSFLLQAQASGAKVVGLANAGGDTVNAVKQAH EFGLTDGGQKLAALLIYAVDVHAIGLQTAQGLVLTESFYWDLNPETRAFSERFYPRNGNTMPTMNHAGVYAGLLHYLKAV AATKSTDPQKTMAWMKANPTDDPLFGKGVVRADGRKIHPMYLFAVKAPSESKGPWDLYELLDTIPAEQAFRPLAEGGCPL VAKP >Mature_403_residues ALIRSCVLSVAIGIAVLAGPAAAEPIRVKVGVLNDMSGVYADTGGKGSVVAAQMAVEDFAKTSPDVQVEIVSADHQNKPD VGAAVARQWYDRDGVDAILDVPTSSVALAVSQVTREKNKIFIDSGAGTTELTGKQCSPNTIQWTYDTYALAHGTAGAMLK RGGDTWYFLTADYAFGLSLQNEAKAVIDAGGGRVLGAARVPFPATDFSSFLLQAQASGAKVVGLANAGGDTVNAVKQAHE FGLTDGGQKLAALLIYAVDVHAIGLQTAQGLVLTESFYWDLNPETRAFSERFYPRNGNTMPTMNHAGVYAGLLHYLKAVA ATKSTDPQKTMAWMKANPTDDPLFGKGVVRADGRKIHPMYLFAVKAPSESKGPWDLYELLDTIPAEQAFRPLAEGGCPLV AKP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42694; Mature: 42563
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIRSCVLSVAIGIAVLAGPAAAEPIRVKVGVLNDMSGVYADTGGKGSVVAAQMAVEDF CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEECCCCCCCEEEHHHHHHHH AKTSPDVQVEIVSADHQNKPDVGAAVARQWYDRDGVDAILDVPTSSVALAVSQVTREKNK HCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCE IFIDSGAGTTELTGKQCSPNTIQWTYDTYALAHGTAGAMLKRGGDTWYFLTADYAFGLSL EEEECCCCCCCCCCCCCCCCEEEEEECEEEEECCCHHHHHHCCCCEEEEEEECEEECCEE QNEAKAVIDAGGGRVLGAARVPFPATDFSSFLLQAQASGAKVVGLANAGGDTVNAVKQAH CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH EFGLTDGGQKLAALLIYAVDVHAIGLQTAQGLVLTESFYWDLNPETRAFSERFYPRNGNT HCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCC MPTMNHAGVYAGLLHYLKAVAATKSTDPQKTMAWMKANPTDDPLFGKGVVRADGRKIHPM CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCCCEEECCCCEECEE YLFAVKAPSESKGPWDLYELLDTIPAEQAFRPLAEGGCPLVAKP EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ALIRSCVLSVAIGIAVLAGPAAAEPIRVKVGVLNDMSGVYADTGGKGSVVAAQMAVEDF HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEECCCCCCCEEEHHHHHHHH AKTSPDVQVEIVSADHQNKPDVGAAVARQWYDRDGVDAILDVPTSSVALAVSQVTREKNK HCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCE IFIDSGAGTTELTGKQCSPNTIQWTYDTYALAHGTAGAMLKRGGDTWYFLTADYAFGLSL EEEECCCCCCCCCCCCCCCCEEEEEECEEEEECCCHHHHHHCCCCEEEEEEECEEECCEE QNEAKAVIDAGGGRVLGAARVPFPATDFSSFLLQAQASGAKVVGLANAGGDTVNAVKQAH CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH EFGLTDGGQKLAALLIYAVDVHAIGLQTAQGLVLTESFYWDLNPETRAFSERFYPRNGNT HCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEECCCCHHHHHHHCCCCCCCC MPTMNHAGVYAGLLHYLKAVAATKSTDPQKTMAWMKANPTDDPLFGKGVVRADGRKIHPM CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCCCEEECCCCEECEE YLFAVKAPSESKGPWDLYELLDTIPAEQAFRPLAEGGCPLVAKP EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA