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The map label for this gene is radA [H]

Identifier: 170750294

GI number: 170750294

Start: 4144371

End: 4145807

Strand: Direct

Name: radA [H]

Synonym: Mrad2831_3897

Alternate gene names: 170750294

Gene position: 4144371-4145807 (Clockwise)

Preceding gene: 170750293

Following gene: 170750296

Centisome position: 68.19

GC content: 73.7

Gene sequence:

>1437_bases
ATGGCCAAGATCCACCAGACCTTCGTCTGCCAGTCCTGCGGGGCGGTCTACAACCGCTGGCGCGGGCGCTGCGAGGCCTG
CAACGGCTGGAACACGATCGTCGAGGAGGCGCCCTCGGCCCCCGGCCAGTCGGGTCCCGCCGCGACCCGGCCGTCGCGCA
ACCGCGGCCGGGTCTTTCCCCTCGAGGGCCTGATCGGCGAGGCCAAGGAGGCGCCGCGCATCCCCTCGGGGATCGGCGAG
CTCGACCGGGTGACCGGCGGCGGCTTCGTGCGCGGTTCGGTGATCCTGCTCGGCGGCGATCCCGGCATCGGCAAGTCGAC
CCTGCTGATGCAGGCCTCCGCCGCCATGGCGGGCACGGGCGAGCGGGTCGCCTACATCTCGGGCGAGGAGGCGGTCGGGC
AGGTGCGCCTGCGGGCCGAGCGGCTGGGCCTGAGCGCCCGCCCGGTCCAGCTCGCCGCCGAGACCAACGTCGAGGACATC
GTCGAGACCCTGAGCCAGGGGCGCCCGCCCGCGCTGGCGATCATCGACTCGATCCAGACCATGTGGACCGAGACGGTGGA
ATCCGCCCCCGGCACGGTCACGCAGGTGCGCTCCTCGGCCCAGGCGCTGATCCGCTTCGCCAAGACCACCGGCACGGCGG
TGATCCTGGTCGGCCACGTCACCAAAGACGGGCAGATCGCCGGCCCCCGGGTGGTGGAGCACATGGTCGACGCGGTCGCC
TCCTTCGAGGGCGACCAGGGCCACCATTTCCGCATCCTGCGCGCCGTGAAGAACCGGTTCGGGCCGACCGACGAGATCGG
CGTGTTCGAGATGACCGATTCGGGGCTCAGCGAGGTGCCGAACCCGTCGGCGCTGTTCCTGGCCGGCCGCGACCATCAGG
CGGCGGGCACCGCGGTCTTCGCCGGGATGGAGGGGACGCGGCCGCTTCTGGTGGAGATCCAGGCGCTCGTCGCCCCCTCC
TCTCTCGGCATGCCCCGGCGCGCCGTGGTCGGCTGGGACCCGAACCGGCTGTCGATGGTGCTCGCCGTGCTGGAGGCCCA
CGGCGGCATCCGGCTCGGGAGCCACGACGTCTACCTGAACGTGGCGGGGGGCCTGCGCATCACCGAGCCGGCGGCGGACC
TCGCGGTGGCGGCCGCCCTGGTCTCGTCGCTGTCGGGGGCCGTGCTGCCGCCCGAGACGGTCTATTTCGGCGAGATCGGC
CTGTCGGGGGCGATCCGGCCCGTGGCGCAGGCGGGCTCCCGGCTGAAGGAGGCGCAGAAGCTCGGCTTCGCCAAGGCGCT
GATCCCGCAGGGCCGCGGCGAGGGCGAGAAGGCGCTGGCGGTCGAGACGCTGCGCCACATCGCCGATCTGGTGGCGGGGA
TCAGCGCGGGCGCGCCGCGGCGGGGCTCCGGCCAGCGCGGGCGGCAGCCGGCCCGCTACGCCGACGAGGAAATGTGA

Upstream 100 bases:

>100_bases
TACGAGATCCTCACGGGACTGGGTTCTCGTTATGTTCGAACCTATGTAGGGTAGCTCCCTCCCCTGACCGGAAGGCCGGA
CGGCCGGCGCGCGGACTCGA

Downstream 100 bases:

>100_bases
GCGCGCCCGTCTTTGCCAGCGCAGCGAAGCGACCCAGGGATGCGCTACGCCCGTAAGGGACCGGTGCCCTGGATTGCTTC
GCCGCGCTCGCAGGGACAGT

Product: DNA repair protein RadA

Products: NA

Alternate protein names: DNA repair protein sms homolog [H]

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAKIHQTFVCQSCGAVYNRWRGRCEACNGWNTIVEEAPSAPGQSGPAATRPSRNRGRVFPLEGLIGEAKEAPRIPSGIGE
LDRVTGGGFVRGSVILLGGDPGIGKSTLLMQASAAMAGTGERVAYISGEEAVGQVRLRAERLGLSARPVQLAAETNVEDI
VETLSQGRPPALAIIDSIQTMWTETVESAPGTVTQVRSSAQALIRFAKTTGTAVILVGHVTKDGQIAGPRVVEHMVDAVA
SFEGDQGHHFRILRAVKNRFGPTDEIGVFEMTDSGLSEVPNPSALFLAGRDHQAAGTAVFAGMEGTRPLLVEIQALVAPS
SLGMPRRAVVGWDPNRLSMVLAVLEAHGGIRLGSHDVYLNVAGGLRITEPAADLAVAAALVSSLSGAVLPPETVYFGEIG
LSGAIRPVAQAGSRLKEAQKLGFAKALIPQGRGEGEKALAVETLRHIADLVAGISAGAPRRGSGQRGRQPARYADEEM

Sequences:

>Translated_478_residues
MAKIHQTFVCQSCGAVYNRWRGRCEACNGWNTIVEEAPSAPGQSGPAATRPSRNRGRVFPLEGLIGEAKEAPRIPSGIGE
LDRVTGGGFVRGSVILLGGDPGIGKSTLLMQASAAMAGTGERVAYISGEEAVGQVRLRAERLGLSARPVQLAAETNVEDI
VETLSQGRPPALAIIDSIQTMWTETVESAPGTVTQVRSSAQALIRFAKTTGTAVILVGHVTKDGQIAGPRVVEHMVDAVA
SFEGDQGHHFRILRAVKNRFGPTDEIGVFEMTDSGLSEVPNPSALFLAGRDHQAAGTAVFAGMEGTRPLLVEIQALVAPS
SLGMPRRAVVGWDPNRLSMVLAVLEAHGGIRLGSHDVYLNVAGGLRITEPAADLAVAAALVSSLSGAVLPPETVYFGEIG
LSGAIRPVAQAGSRLKEAQKLGFAKALIPQGRGEGEKALAVETLRHIADLVAGISAGAPRRGSGQRGRQPARYADEEM
>Mature_477_residues
AKIHQTFVCQSCGAVYNRWRGRCEACNGWNTIVEEAPSAPGQSGPAATRPSRNRGRVFPLEGLIGEAKEAPRIPSGIGEL
DRVTGGGFVRGSVILLGGDPGIGKSTLLMQASAAMAGTGERVAYISGEEAVGQVRLRAERLGLSARPVQLAAETNVEDIV
ETLSQGRPPALAIIDSIQTMWTETVESAPGTVTQVRSSAQALIRFAKTTGTAVILVGHVTKDGQIAGPRVVEHMVDAVAS
FEGDQGHHFRILRAVKNRFGPTDEIGVFEMTDSGLSEVPNPSALFLAGRDHQAAGTAVFAGMEGTRPLLVEIQALVAPSS
LGMPRRAVVGWDPNRLSMVLAVLEAHGGIRLGSHDVYLNVAGGLRITEPAADLAVAAALVSSLSGAVLPPETVYFGEIGL
SGAIRPVAQAGSRLKEAQKLGFAKALIPQGRGEGEKALAVETLRHIADLVAGISAGAPRRGSGQRGRQPARYADEEM

Specific function: May play a role in the repair of endogenous alkylation damage [H]

COG id: COG1066

COG function: function code O; Predicted ATP-dependent serine protease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family. RadA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790850, Length=438, Percent_Identity=48.1735159817352, Blast_Score=399, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR020568 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 49994; Mature: 49862

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIHQTFVCQSCGAVYNRWRGRCEACNGWNTIVEEAPSAPGQSGPAATRPSRNRGRVFP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LEGLIGEAKEAPRIPSGIGELDRVTGGGFVRGSVILLGGDPGIGKSTLLMQASAAMAGTG
HHHHHCCHHHCCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCHHHHEEHHHHHCCCC
ERVAYISGEEAVGQVRLRAERLGLSARPVQLAAETNVEDIVETLSQGRPPALAIIDSIQT
CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHH
MWTETVESAPGTVTQVRSSAQALIRFAKTTGTAVILVGHVTKDGQIAGPRVVEHMVDAVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
SFEGDQGHHFRILRAVKNRFGPTDEIGVFEMTDSGLSEVPNPSALFLAGRDHQAAGTAVF
HCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCEEEEECCCCCCCCCEEE
AGMEGTRPLLVEIQALVAPSSLGMPRRAVVGWDPNRLSMVLAVLEAHGGIRLGSHDVYLN
ECCCCCCHHHEEHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEE
VAGGLRITEPAADLAVAAALVSSLSGAVLPPETVYFGEIGLSGAIRPVAQAGSRLKEAQK
EECCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
LGFAKALIPQGRGEGEKALAVETLRHIADLVAGISAGAPRRGSGQRGRQPARYADEEM
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKIHQTFVCQSCGAVYNRWRGRCEACNGWNTIVEEAPSAPGQSGPAATRPSRNRGRVFP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LEGLIGEAKEAPRIPSGIGELDRVTGGGFVRGSVILLGGDPGIGKSTLLMQASAAMAGTG
HHHHHCCHHHCCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCHHHHEEHHHHHCCCC
ERVAYISGEEAVGQVRLRAERLGLSARPVQLAAETNVEDIVETLSQGRPPALAIIDSIQT
CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHH
MWTETVESAPGTVTQVRSSAQALIRFAKTTGTAVILVGHVTKDGQIAGPRVVEHMVDAVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
SFEGDQGHHFRILRAVKNRFGPTDEIGVFEMTDSGLSEVPNPSALFLAGRDHQAAGTAVF
HCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCEEEEECCCCCCCCCEEE
AGMEGTRPLLVEIQALVAPSSLGMPRRAVVGWDPNRLSMVLAVLEAHGGIRLGSHDVYLN
ECCCCCCHHHEEHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEE
VAGGLRITEPAADLAVAAALVSSLSGAVLPPETVYFGEIGLSGAIRPVAQAGSRLKEAQK
EECCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
LGFAKALIPQGRGEGEKALAVETLRHIADLVAGISAGAPRRGSGQRGRQPARYADEEM
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA