| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750261
Identifier: 170750261
GI number: 170750261
Start: 4112586
End: 4113272
Strand: Reverse
Name: 170750261
Synonym: Mrad2831_3864
Alternate gene names: NA
Gene position: 4113272-4112586 (Counterclockwise)
Preceding gene: 170750262
Following gene: 170750260
Centisome position: 67.68
GC content: 77.73
Gene sequence:
>687_bases GTGTCGCGCCGCTACGCCCTCTACTGGCTGCCCGCCCCGGGATCCCGCCTCGAAGCCTTCGGGCGCGCGGTCCTCGGCAC CGACAACGTCTCCGGGCTGCCGGTCGCGCACCCGGAGGGGCTCGGTGATCTCGCGGCGGTCACGGCGGGCGCGCGGGTCT ACGGGTTCCACGCCACCCTCAAGGCGCCGCTGCGCCTCGCCCCGGGCGCCGCGGAGGCCGACCTCGTCGCCGCCGCCCGC GACCTCGCGGCCGCGCACCCGCCGGTGGCGGTGGGCCCGCTCCGGGTCGCCGCCCTCGGACCGTTCCTCGCCCTGGTGCC GGAGGCCCCGCCGCCGGAGCTGGGGCTGCTGGCGGCCGAATGCGTCGCCGCCCTGGACCCGTTCCGGGCGCCGCTCACGG AGGCCGAGCGCGCCAAGCGCCGCCCGGAGCGCCTCGACGCGCGCGGCCGCGCGCTCCTCGCGCGCTGGGGCTACCCGTAC GTGTTCGAGGCCTTCCGCTTCCACATGACCCTGACCGACGCCCTGCCGGAGGCGGATCGCGATTCCTGGCACCGGCGCCT GTCCGAAGCCTACGGCGCCGCGGGGCCGGAGCCCCTGCGGATCGACGCCGTCAGCCTCCTGATCCAGGACGGGTCGGAGC CGTTCCGGCTCCTGGCGCGCCTGCCCTTCGGAGAAGCCCGTGGTTGA
Upstream 100 bases:
>100_bases GTGTGGCGGGGCAACGCCATGGACGTGCGCCCCCGGCGGGCCGCCGGCGCGCGCTCCTACGCGCCGACGGCCTGACCGCC CGGCGATCGGAGGCCCTGAC
Downstream 100 bases:
>100_bases CCGCCCCCTCGGCCTCGAACCCGCGCTCGATCCGAGCGCCCGGGTCGTCGACAGCCGCCTCGGCCGCTACACCGAGGTCG GCGCCCGCACCCGGCTCACC
Product: phosphonate metabolism protein
Products: NA
Alternate protein names: Xylose Isomerase
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSRRYALYWLPAPGSRLEAFGRAVLGTDNVSGLPVAHPEGLGDLAAVTAGARVYGFHATLKAPLRLAPGAAEADLVAAAR DLAAAHPPVAVGPLRVAALGPFLALVPEAPPPELGLLAAECVAALDPFRAPLTEAERAKRRPERLDARGRALLARWGYPY VFEAFRFHMTLTDALPEADRDSWHRRLSEAYGAAGPEPLRIDAVSLLIQDGSEPFRLLARLPFGEARG
Sequences:
>Translated_228_residues MSRRYALYWLPAPGSRLEAFGRAVLGTDNVSGLPVAHPEGLGDLAAVTAGARVYGFHATLKAPLRLAPGAAEADLVAAAR DLAAAHPPVAVGPLRVAALGPFLALVPEAPPPELGLLAAECVAALDPFRAPLTEAERAKRRPERLDARGRALLARWGYPY VFEAFRFHMTLTDALPEADRDSWHRRLSEAYGAAGPEPLRIDAVSLLIQDGSEPFRLLARLPFGEARG >Mature_227_residues SRRYALYWLPAPGSRLEAFGRAVLGTDNVSGLPVAHPEGLGDLAAVTAGARVYGFHATLKAPLRLAPGAAEADLVAAARD LAAAHPPVAVGPLRVAALGPFLALVPEAPPPELGLLAAECVAALDPFRAPLTEAERAKRRPERLDARGRALLARWGYPYV FEAFRFHMTLTDALPEADRDSWHRRLSEAYGAAGPEPLRIDAVSLLIQDGSEPFRLLARLPFGEARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24363; Mature: 24232
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRYALYWLPAPGSRLEAFGRAVLGTDNVSGLPVAHPEGLGDLAAVTAGARVYGFHATL CCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEHHEE KAPLRLAPGAAEADLVAAARDLAAAHPPVAVGPLRVAALGPFLALVPEAPPPELGLLAAE CCCEEECCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCCCHHHHHHH CVAALDPFRAPLTEAERAKRRPERLDARGRALLARWGYPYVFEAFRFHMTLTDALPEADR HHHHHCCCCCCHHHHHHHHCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCH DSWHRRLSEAYGAAGPEPLRIDAVSLLIQDGSEPFRLLARLPFGEARG HHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure SRRYALYWLPAPGSRLEAFGRAVLGTDNVSGLPVAHPEGLGDLAAVTAGARVYGFHATL CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEHHEE KAPLRLAPGAAEADLVAAARDLAAAHPPVAVGPLRVAALGPFLALVPEAPPPELGLLAAE CCCEEECCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCCCCHHHHHHH CVAALDPFRAPLTEAERAKRRPERLDARGRALLARWGYPYVFEAFRFHMTLTDALPEADR HHHHHCCCCCCHHHHHHHHCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCH DSWHRRLSEAYGAAGPEPLRIDAVSLLIQDGSEPFRLLARLPFGEARG HHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA