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The map label for this gene is sodC [H]

Identifier: 170750217

GI number: 170750217

Start: 4063341

End: 4063880

Strand: Reverse

Name: sodC [H]

Synonym: Mrad2831_3819

Alternate gene names: 170750217

Gene position: 4063880-4063341 (Counterclockwise)

Preceding gene: 170750223

Following gene: 170750212

Centisome position: 66.86

GC content: 70.74

Gene sequence:

>540_bases
ATGACCCGCACCCTGCCGCTGCTCGCATTGCTCGGGACCGCCGCCGCCGGCGGCGCCCTGGCGCAGGAGCCTCCCAAGGA
GGCGGCCAAACCGGCAGAGACCTACACGGCGCCGATCAAGAACGCGAAGGGCGACCCGATCGGAACGCTGGCGATCCGCG
ACGGGGCGAATACCCTGGTCCTGCGCGTGACGATCCAGCCCGGCGGACTGCCGCCCGGCTGGCACGGGATGCATTTCCAC
GCCGTGGGCGACTGCTCGGACCCGAAGTTCATGAACTCCAAGGCCCACGTGAACCACGACCAGAGCAAGCACGGGCTGCT
CAACGCGGAGGGGCCCGACGAGGGCGACCTGCCGAACCTCTACGCGGCGCAGGACGGCTCGGCCAACGCCGAGGTCTCGA
GCGAGACCCCGCTGAACGGCGAGGGCGGCCTGAAGGACGGCGACGGCGCGGCGCTGATCATCCACGCCAACGAGGACGAC
CACAACACCCAGCCGATCGGCGGCGCCGGCGACCGCATCGCCTGCGGGGTGATCAAGTAG

Upstream 100 bases:

>100_bases
GTGCGGTTCCGGCAGGTCTGCGGCGGAGGTTTCGGGCCGCCGCCCTGTCGAAGGCCGGCGCGCTCCCTAACTAGACCGGG
CCGGAAAGGAGAGCCACCGC

Downstream 100 bases:

>100_bases
CCGTCGCGGAGGGGGACGGCACGGCCGGCGGGATCGGCCGCGGCCGGCCGTCCTCGTCGATGGCCACGAAGGTGAAGGTG
GCCTGCGTGACCCGCTCGCG

Product: superoxide dismutase copper/zinc binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTRTLPLLALLGTAAAGGALAQEPPKEAAKPAETYTAPIKNAKGDPIGTLAIRDGANTLVLRVTIQPGGLPPGWHGMHFH
AVGDCSDPKFMNSKAHVNHDQSKHGLLNAEGPDEGDLPNLYAAQDGSANAEVSSETPLNGEGGLKDGDGAALIIHANEDD
HNTQPIGGAGDRIACGVIK

Sequences:

>Translated_179_residues
MTRTLPLLALLGTAAAGGALAQEPPKEAAKPAETYTAPIKNAKGDPIGTLAIRDGANTLVLRVTIQPGGLPPGWHGMHFH
AVGDCSDPKFMNSKAHVNHDQSKHGLLNAEGPDEGDLPNLYAAQDGSANAEVSSETPLNGEGGLKDGDGAALIIHANEDD
HNTQPIGGAGDRIACGVIK
>Mature_178_residues
TRTLPLLALLGTAAAGGALAQEPPKEAAKPAETYTAPIKNAKGDPIGTLAIRDGANTLVLRVTIQPGGLPPGWHGMHFHA
VGDCSDPKFMNSKAHVNHDQSKHGLLNAEGPDEGDLPNLYAAQDGSANAEVSSETPLNGEGGLKDGDGAALIIHANEDDH
NTQPIGGAGDRIACGVIK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May function against extracytoplasmic toxic oxygen species [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18317; Mature: 18185

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00087 SOD_CU_ZN_1 ; PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTLPLLALLGTAAAGGALAQEPPKEAAKPAETYTAPIKNAKGDPIGTLAIRDGANTLV
CCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHEECCCCCCCCCCEEEEEEECCCCEEE
LRVTIQPGGLPPGWHGMHFHAVGDCSDPKFMNSKAHVNHDQSKHGLLNAEGPDEGDLPNL
EEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCE
YAAQDGSANAEVSSETPLNGEGGLKDGDGAALIIHANEDDHNTQPIGGAGDRIACGVIK
EEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TRTLPLLALLGTAAAGGALAQEPPKEAAKPAETYTAPIKNAKGDPIGTLAIRDGANTLV
CCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHEECCCCCCCCCCEEEEEEECCCCEEE
LRVTIQPGGLPPGWHGMHFHAVGDCSDPKFMNSKAHVNHDQSKHGLLNAEGPDEGDLPNL
EEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCE
YAAQDGSANAEVSSETPLNGEGGLKDGDGAALIIHANEDDHNTQPIGGAGDRIACGVIK
EEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2345128; 11259647; 7050107 [H]