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The map label for this gene is fliN [C]

Identifier: 170750204

GI number: 170750204

Start: 4047880

End: 4048248

Strand: Direct

Name: fliN [C]

Synonym: Mrad2831_3806

Alternate gene names: 170750204

Gene position: 4047880-4048248 (Clockwise)

Preceding gene: 170750202

Following gene: 170750206

Centisome position: 66.6

GC content: 69.65

Gene sequence:

>369_bases
TTGCAAGGGCTTGCTGCGAAGGCTTGCCCGGACCGGACCGGCGGCGAGACGGGATGGCGGGCGGTGGCGGTCTTCGAGAC
CCTGAAGGTCGATCTGACGGTGGTGCTGGGCCGCGCCCGCATGCCGCTGCACATGCTTCTGCGCATGGGCCGCGGCGCCG
TGATCGAGCTGGAGGCCAGCGACAGCGACATGGTCGAGATCCTGGCCAACGACCACCCGATCGCGCGCGGGCAGATCGTG
GTGACGGGCGACCGCATCTCCGTGGAGGTGACCGAGCTGATCCGCAAGGCGGCCTCGATCGTCGAGCCGGGCGTCAGCAT
CGGCGACGGTGCGGCGCCATTCTTGGAGGGCGGCTACGATTCCCCGTGA

Upstream 100 bases:

>100_bases
TTCGGGAACGCGTGCGGGCTGACCGTGAGGCGGGGCGCGTTTACCAAGAGTTCACCATCCTGCGTCGATGGTCGAAGCCT
TCAACACCCGCGGCCGGCGG

Downstream 100 bases:

>100_bases
GTGCGCTTGTCGGCGGCCGGACGATCTGTTATCCGCTGCGCCGCGCGACACGAAAGCGGCCCCGGGTTCTCCCGCGGGGT
GCGACGGTCGGGCAACCGGA

Product: surface presentation of antigens (SPOA) protein

Products: NA

Alternate protein names: FliN Family Protein; Surface Presentation Of Antigens; Flagellar Motor Switch Protein FliN

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MQGLAAKACPDRTGGETGWRAVAVFETLKVDLTVVLGRARMPLHMLLRMGRGAVIELEASDSDMVEILANDHPIARGQIV
VTGDRISVEVTELIRKAASIVEPGVSIGDGAAPFLEGGYDSP

Sequences:

>Translated_122_residues
MQGLAAKACPDRTGGETGWRAVAVFETLKVDLTVVLGRARMPLHMLLRMGRGAVIELEASDSDMVEILANDHPIARGQIV
VTGDRISVEVTELIRKAASIVEPGVSIGDGAAPFLEGGYDSP
>Mature_122_residues
MQGLAAKACPDRTGGETGWRAVAVFETLKVDLTVVLGRARMPLHMLLRMGRGAVIELEASDSDMVEILANDHPIARGQIV
VTGDRISVEVTELIRKAASIVEPGVSIGDGAAPFLEGGYDSP

Specific function: Flin Is One Of Three Proteins (Flig, Flin, Flim) That Form A Switch Complex That Is Proposed To Be Located At The Base Of The Basal Body. This Complex Interacts With The Chey And Chez Chemotaxis Proteins, In Addition To Contacting Components Of The Motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12883; Mature: 12883

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLAAKACPDRTGGETGWRAVAVFETLKVDLTVVLGRARMPLHMLLRMGRGAVIELEAS
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHEEEEEECCCCCCHHHHHHCCCCCEEEEECC
DSDMVEILANDHPIARGQIVVTGDRISVEVTELIRKAASIVEPGVSIGDGAAPFLEGGYD
CCCEEEEECCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SP
CC
>Mature Secondary Structure
MQGLAAKACPDRTGGETGWRAVAVFETLKVDLTVVLGRARMPLHMLLRMGRGAVIELEAS
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHEEEEEECCCCCCHHHHHHCCCCCEEEEECC
DSDMVEILANDHPIARGQIVVTGDRISVEVTELIRKAASIVEPGVSIGDGAAPFLEGGYD
CCCEEEEECCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA