| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750206
Identifier: 170750206
GI number: 170750206
Start: 4050091
End: 4052034
Strand: Direct
Name: 170750206
Synonym: Mrad2831_3808
Alternate gene names: NA
Gene position: 4050091-4052034 (Clockwise)
Preceding gene: 170750204
Following gene: 170750207
Centisome position: 66.64
GC content: 74.85
Gene sequence:
>1944_bases ATGTCCAGCGTTCCCCAGCCCGCCGAACTGACGCTGCGCGGCATCGTGCTGGGCGGCGCGATCACGCTGATCTTCACCGC CGCCAACGTCTATCTCGGCCTCAAGGTCGGCCTGACCTTCGCCACCTCGATTCCCGCCGCCGTCATCTCCATGGCGATCC TGCGGCGCCTGCCCGGCGCCACGGTCCTGGAGAACAACATCGTCCAGACCGTCGCTTCCGCGGCCGGCACCCTGTCGGCG ATCATCTTCGTGCTGCCCGGTCTGGTGATGATCGGCTGGTGGCAGGGCTTTCCGTGGCTCACCACCGCGGGCATCACCGC GACGGGCGGGATCCTCGGCGTGATGTTCTCCGTGCCCCTGCGCCGCGCCCTCGTGGTCGAGGCCGACCTGCCCTTTCCCG AGGGCCGGGCCGCCGCCGAGGTGCTGGCGGTGGGCTCCGGCAGCCGTGCCGGGGAAGCCGACAGCGCCCGCGGCCTGCGG CTCCTCGCGTGGAACGGCCTCGTCTCGGCGGCCTTCGCGGCGCTGGCCCAGACCCGGCTCGTCCTCGACAGCGCCGGCAC GTGGTTCCGGGTCGGCGCGGGCGCCACCGGGATCGCCGGCAACCTGTCCTTCGCGCTGATCGGCGTCGGCCACCTCGTCG GGCCCTCGGTCGGGGCCGCGATGGCCCTGGGGCTGGCGATCGCCTGGGGCGGCCTCATCCCGCTGCTGACCGCCGCGCAG CCGATGCCGGGCGCCGGCCTGGAGGCCTGGGTCGGCGCGGTGTTCCGCCAGGACGTGCGCTTCTTCGGCGCCGGCGTGAT GGGCGTCGCGGCGGTCTGGACCCTGGTTCGGATCGCCGCTCCGGTACTCGGCGGCATCCGCTCGGCGCTGGCGGCCGGGC GCGCCCGCGCGGCCGGCGCGGCGCTCGCCGTCGCGGAGCGCGACCTGCCGGTCGCCGCAGTGGTGGTGGTCTCCCTGGCC CTGCTCGCGCCGATCGGCTGGCTGCTGTGGACCGTGCTGGCCGGGACGCCGCTGGAAGGCGAGGCCCTCCCGCTGATCGC CGGCGCCCTGCTGTTCATCCTCGTGATCGGCCTCTGCGTCGCCGCCGTGACCGGCTACATGGCCGGGCTGATCGGCGCCT CGAACTCTCCCCTGTCGGGCGTCGGAATCCTCGCCGTGCTGGCGAGCGCGGCCCTTCTCCTGGGGCTGTTCGGCCGCGGG ACCGATCCGGAGGGCACCCGGGCGCTGGTCGCCTACGCCCTGGCGGTCACCGGGATCGTGTTCGGCGTCGCCACCATCGC CAACGACAACCTGCAGGATCTCAAGACCGGGCAGCTCGTCGGCGCGACGCCCTGGAAGCAGCAGGTCGCCCTGGTCATCG GCGTGGCCTTCGGCTCCGTCATCATCCCGCCGGTGCTGAACCTCCTCGGCACCAGCTTCGGCTTCGCGGGCGCGCCCGGG GCGGGCCCGAACGCCCTCGCGGCACCGCAGGCCGGGCTGATCTCGGCGCTTGCCCGGGGCGTCCTGACCGGCGATGCCAA CTGGCGGATGCTGGCCTGGGGCGCCGTCGCCGGCCTCGGCCTCGTCGGCCTGGACGCGGCTCTCGGGCGCCTGAATGTCC TGCGCCTGCCGCCGCTGGCCGTCGCCCTCGGGATCTACCTGCCGATGAAGCTGGTCCTGCCGCTGGTGGCGGGCGCCGCG ATCGGCACGTTCTACGACCGCTGGGCCCGGGGGCGGCCCGATCCGGAGCTGGCCCTGCGCATGGGCACGCTCACCGCGAC CGGCCTGATCGTCGGCGAGAGCCTGTGGGGCGTCACCTTCGCGCTGATCGTCTACCTGTCGGGCAGCGACGCGCCCCTGG CGCTGCCCGGCTCGGAGGCGCAGGGCGCCGCGCTGCTCGCCGGCCTCGCGCTGTTCGCCGGCGCGACGGCGGCCCTGTAC CGGACCGCGCGGCGCTCGGCCTGA
Upstream 100 bases:
>100_bases GCGCGGTTTCGGATACCGGCGGCTGATCGTGGTGCGGCGGCTGTCTTTTCTCCGGTCCTGTTCCTAGACTGGTCCGGTCC CGCAACCGGGTCCGGTCCGC
Downstream 100 bases:
>100_bases CCGGGCCGCAACCCGGCCCTGCATTGACTTCGCAGCCGCACACACGCATATCGGCGGCGCAGCGTCAGCGGCCGTCATGG CCCGCTTGAGGGGGCTGCGT
Product: OPT family oligopeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 647; Mature: 646
Protein sequence:
>647_residues MSSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGATVLENNIVQTVASAAGTLSA IIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPLRRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLR LLAWNGLVSAAFAALAQTRLVLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGAALAVAERDLPVAAVVVVSLA LLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCVAAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRG TDPEGTRALVAYALAVTGIVFGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLAVALGIYLPMKLVLPLVAGAA IGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTFALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALY RTARRSA
Sequences:
>Translated_647_residues MSSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGATVLENNIVQTVASAAGTLSA IIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPLRRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLR LLAWNGLVSAAFAALAQTRLVLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGAALAVAERDLPVAAVVVVSLA LLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCVAAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRG TDPEGTRALVAYALAVTGIVFGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLAVALGIYLPMKLVLPLVAGAA IGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTFALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALY RTARRSA >Mature_646_residues SSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGATVLENNIVQTVASAAGTLSAI IFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPLRRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLRL LAWNGLVSAAFAALAQTRLVLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQP MPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGAALAVAERDLPVAAVVVVSLAL LAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCVAAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRGT DPEGTRALVAYALAVTGIVFGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPGA GPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLAVALGIYLPMKLVLPLVAGAAI GTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTFALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALYR TARRSA
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 64800; Mature: 64669
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGA CCCCCCCHHHEEEHEEHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHCCCC TVLENNIVQTVASAAGTLSAIIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHH RRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLRLLAWNGLVSAAFAALAQTRL HHEEEEEECCCCCCCCHHHHHEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH VLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ HHCCCCCEEEECCCCCCCCCCCHHHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGA CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH ALAVAERDLPVAAVVVVSLALLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCV HHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRGTDPEGTRALVAYALAVTGIV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH FGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG HHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLA CCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHH VALGIYLPMKLVLPLVAGAAIGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALYRTARRSA HHHHEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGA CCCCCCHHHEEEHEEHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHCCCC TVLENNIVQTVASAAGTLSAIIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHH RRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLRLLAWNGLVSAAFAALAQTRL HHEEEEEECCCCCCCCHHHHHEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH VLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ HHCCCCCEEEECCCCCCCCCCCHHHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGA CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH ALAVAERDLPVAAVVVVSLALLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCV HHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRGTDPEGTRALVAYALAVTGIV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH FGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG HHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLA CCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHH VALGIYLPMKLVLPLVAGAAIGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALYRTARRSA HHHHEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]