| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is hit [H]
Identifier: 170750151
GI number: 170750151
Start: 3995578
End: 3996015
Strand: Reverse
Name: hit [H]
Synonym: Mrad2831_3753
Alternate gene names: 170750151
Gene position: 3996015-3995578 (Counterclockwise)
Preceding gene: 170750153
Following gene: 170750147
Centisome position: 65.75
GC content: 71.69
Gene sequence:
>438_bases ATGGCCGACGCCCGCTACGATCCCGACAACATCTTCGCCAAGATCCTGCACGGCGAGATCCCCTGCCACCGCGTCTACGA GGACGCCCACACCCTGGCCTTCATGGACGTGATGCCCCAGGGCGAGGGCCACACGCTGGTGATCCCGAAGGCGCCGGCCC GCGGCCTGCTCGACGCCAACCCGGACTCGCTCGCCGCGCTGATGGCGAGCGTCCAGAAGGTCGCCCGCGCCGTGAAGGCC GCCTTCCGGGCCGAGGGTCTGACCCTGTTCCAGTTCAACGAGCCGGCCGGCGGCCAGACCGTGTTCCACCTGCACGTCCA CGTCATCCCGCGGCGCGAGGGCGTGCCGCTGAAGCGCCACGAGGGCGGGATGGCCGACAACGCGGTCCTCGCCGAGCACG CCGCGCGCATCCGCGCGGCGCTCGAGTCTCAGGCCTGA
Upstream 100 bases:
>100_bases CCGCGGCGATGCAAGCGTCGCGGCGGGTCGGTTGTTCCCGTGTGGACGCGGGCGGGTACCCCGTGCAACCTGCGGCCGCT CAAGGAGTCCCGGAGGCAGC
Downstream 100 bases:
>100_bases CGCTCAGGCCCGGGACTCAGGCCGCGCTCGCCGAATCGCCCGACTGGGCCATGCTGGCGAGCAGCCGGCGCAGGGCGGCG TTCTCGGTCTCGAGCTCGCT
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MADARYDPDNIFAKILHGEIPCHRVYEDAHTLAFMDVMPQGEGHTLVIPKAPARGLLDANPDSLAALMASVQKVARAVKA AFRAEGLTLFQFNEPAGGQTVFHLHVHVIPRREGVPLKRHEGGMADNAVLAEHAARIRAALESQA
Sequences:
>Translated_145_residues MADARYDPDNIFAKILHGEIPCHRVYEDAHTLAFMDVMPQGEGHTLVIPKAPARGLLDANPDSLAALMASVQKVARAVKA AFRAEGLTLFQFNEPAGGQTVFHLHVHVIPRREGVPLKRHEGGMADNAVLAEHAARIRAALESQA >Mature_144_residues ADARYDPDNIFAKILHGEIPCHRVYEDAHTLAFMDVMPQGEGHTLVIPKAPARGLLDANPDSLAALMASVQKVARAVKAA FRAEGLTLFQFNEPAGGQTVFHLHVHVIPRREGVPLKRHEGGMADNAVLAEHAARIRAALESQA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI261278358, Length=84, Percent_Identity=38.0952380952381, Blast_Score=63, Evalue=8e-11, Organism=Homo sapiens, GI4503719, Length=84, Percent_Identity=38.0952380952381, Blast_Score=63, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=38.8888888888889, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320078, Length=112, Percent_Identity=34.8214285714286, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574010, Length=108, Percent_Identity=40.7407407407407, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24581222, Length=108, Percent_Identity=40.7407407407407, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 15731; Mature: 15600
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADARYDPDNIFAKILHGEIPCHRVYEDAHTLAFMDVMPQGEGHTLVIPKAPARGLLDAN CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCCCCC PDSLAALMASVQKVARAVKAAFRAEGLTLFQFNEPAGGQTVFHLHVHVIPRREGVPLKRH HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCC EGGMADNAVLAEHAARIRAALESQA CCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADARYDPDNIFAKILHGEIPCHRVYEDAHTLAFMDVMPQGEGHTLVIPKAPARGLLDAN CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCCCCC PDSLAALMASVQKVARAVKAAFRAEGLTLFQFNEPAGGQTVFHLHVHVIPRREGVPLKRH HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCC EGGMADNAVLAEHAARIRAALESQA CCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]