| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is nadE [H]
Identifier: 170750148
GI number: 170750148
Start: 3992327
End: 3994426
Strand: Direct
Name: nadE [H]
Synonym: Mrad2831_3750
Alternate gene names: 170750148
Gene position: 3992327-3994426 (Clockwise)
Preceding gene: 170750145
Following gene: 170750149
Centisome position: 65.69
GC content: 71.67
Gene sequence:
>2100_bases ATGACCCGCAGCCACCCCTCATCCGGACAGGTGCCCGTGTCTCCAGCCACCTCCGAATCGCCGGCGCGCTTCCGCTCCCT CTATCGCCACGGGTTCGCCCGGGTCGCGGCCTGCACCGGCCGCAGCCATCCGGCCGAGCCCGAGCGCAACGCCGACGTCA TCCTCGACCTCGCCCGGACCTGCCACGATTCGGGGGCGGCGCTGGCGGTCTTCACCGAGCTCGGCCTCTCGGCCTACGCG ATCGAGGACCTGCTCTTGCAGCAGACGCTGCTGGACGCGGTCGAGGCCGCCGCAGCCCGGGTGATCGCCGAATCGGCCAA TCTCCGGCCGCTGCTGCTCGTCGGCGCGCCCCTGCGCTGGCGGCACCGCGTCTACAACTGCGCGCTCGCCATCCAGGGCG GCCGCCTGCTCGGCGCCGTCCCCAAGACATTCCTGCCGAACTACCGGGAATTCTACGAGAAGCGCCACTTCGCCTCGGGC GCCGGGATCGCCGGCGAGACCGTCCGGGTCGCCGGTCGGGACGCGCCGTTCGGCACCGACCTGCTGTTCCCCGCCGAGGA CCTGCCGGGCCTCGTGGTCGGGGTGGAGATCTGCGAGGATCTGTGGGTGCCGGAGCCCCCCGGCATGCGCGCGGCGCTCG CCGGCGCCACCGTGCTGGCGAATCTCTCGGGCAGCCCGATCACCGTCGGCCGGGCCGAGTCGCGGGCGCTCCTCTCCCGG GCGGCCTCGATGCGGGGCGCCTGCGCGTACGTCTACGCGGCGGCCGGCCAGGGCGAATCGACCACCGACCTGTCCTGGGA CGGCCAGACCAGCATCGACGAGCTGGGCGTGCGCCTCGCGGAGGGCGAGCGCTTCCCCGAGAAGCCGGTGACGACGCTGG CCGACATCGACCTCGACCTGATCGCCCAGGAGCGCCTGCAGGCGGGCAGCTTCGACGACGACGCGCGCGGCCACACCCTG CCCTATCGCCGGGTGCCGTTCCGGGTCGGCCCGCCGGAGGCCGATCTCGGCCTGATCCGGCGGATCGAGCGCTTTCCGTT CGTGCCGGCCGACCCGTCGCGCCTCGCGCAGGATTGCTACGAGGCCTACAACATCCAGGTCGCCGGCCTCGCCAAGCGCC TGGAGGCCACCGGCACCCGCAAGGCCATCATCGGCGTCTCGGGCGGCCTCGATTCGACCCACGCGCTGATCGTGATCGCC AAGGCGTTCGACCGCCTCGGCTACCCGCGCTCGGACATCCTGGCCTACACGCTGCCGGGCTTCGCCACCTCGAACGCGAC CAAGACCAACGCCCACGCGCTCATGAAGGCGCTGGGCTGCACGGCGGCCGAGATCGACATCCGCCCGGCCGCCAAGCAGA TGCTCGCCGACATGAACCACCCCTTCGCCAAGGGCGAGGCGGTCTACGACGTCACCTTCGAGAACGTGCAGGCGGGCCTG CGCACCGACTACCTGTTCCGGCTCGCCAACCACGCGGGCGGCATCGTGGTCGGCACCGGCGACCTGTCGGAGCTGGCACT CGGCTGGTGCACCTACGGCGTCGGCGACCAGATGAGCCACTACGCGGTCAATGCCGGCGTGCCCAAGACGCTGATCCAGC ACCTGATCCGCTGGGTGATCGGCAACGGCGAGGTCGGCGCGGACGAGGCCCGCACCCTCCAGGCCGTCCTCGACACCGAG ATCTCCCCCGAGCTCGTGCCGGTGGACCAGGACGACAGCCCGCAGAGCACGGAGGGCACGATCGGCCCCTACGCGCTGCA GGATTTCAACCTGTTCTACACGCTGCGCTACGGGTTCCGGCCCTCGAAGATCGCCTTCCTGGCGCTCCACGCCTGGGGCG ACCGGGAGCGCGGCACCTGGGCGCCGGACTTCCCGGAGACCAAGCGGGTCGCCTACGAACTCCCGGAGATCCGCCGCTGG CTCGGGGTGTTCCTGACCCGCTACTTCGGCTTCAGCCAGTTCAAGCGCTCGGCGCTCCCGAACGGGCCGAAGGTCTCGGC CGGCGGCTCCCTGTCGCCCCGGGGCGACTGGCGCGCGCCCTCCGACGGGTCGGCGCGGATCTGGATCGACGAGTTGAACC GAAACGTCCCTGAAACTTGA
Upstream 100 bases:
>100_bases TCCCCGTCCCGAGGCGCCGCGGCGCGGTCTCTCGGGATGACGTCGAGAGCGGGCTAGAGTGCGGGCAGGCTCCGCGCCCC CGACAGTCCGCATCCCCTAT
Downstream 100 bases:
>100_bases CCGTCACAAACTCGACCGATTGTGCCATTATGAGCACGGTCAAGCCGATTCTTCGCAATGCGAGATCTTGTATTGGGAAA ATTGGCTTCGAGGGCGGCCA
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 699; Mature: 698
Protein sequence:
>699_residues MTRSHPSSGQVPVSPATSESPARFRSLYRHGFARVAACTGRSHPAEPERNADVILDLARTCHDSGAALAVFTELGLSAYA IEDLLLQQTLLDAVEAAAARVIAESANLRPLLLVGAPLRWRHRVYNCALAIQGGRLLGAVPKTFLPNYREFYEKRHFASG AGIAGETVRVAGRDAPFGTDLLFPAEDLPGLVVGVEICEDLWVPEPPGMRAALAGATVLANLSGSPITVGRAESRALLSR AASMRGACAYVYAAAGQGESTTDLSWDGQTSIDELGVRLAEGERFPEKPVTTLADIDLDLIAQERLQAGSFDDDARGHTL PYRRVPFRVGPPEADLGLIRRIERFPFVPADPSRLAQDCYEAYNIQVAGLAKRLEATGTRKAIIGVSGGLDSTHALIVIA KAFDRLGYPRSDILAYTLPGFATSNATKTNAHALMKALGCTAAEIDIRPAAKQMLADMNHPFAKGEAVYDVTFENVQAGL RTDYLFRLANHAGGIVVGTGDLSELALGWCTYGVGDQMSHYAVNAGVPKTLIQHLIRWVIGNGEVGADEARTLQAVLDTE ISPELVPVDQDDSPQSTEGTIGPYALQDFNLFYTLRYGFRPSKIAFLALHAWGDRERGTWAPDFPETKRVAYELPEIRRW LGVFLTRYFGFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDGSARIWIDELNRNVPET
Sequences:
>Translated_699_residues MTRSHPSSGQVPVSPATSESPARFRSLYRHGFARVAACTGRSHPAEPERNADVILDLARTCHDSGAALAVFTELGLSAYA IEDLLLQQTLLDAVEAAAARVIAESANLRPLLLVGAPLRWRHRVYNCALAIQGGRLLGAVPKTFLPNYREFYEKRHFASG AGIAGETVRVAGRDAPFGTDLLFPAEDLPGLVVGVEICEDLWVPEPPGMRAALAGATVLANLSGSPITVGRAESRALLSR AASMRGACAYVYAAAGQGESTTDLSWDGQTSIDELGVRLAEGERFPEKPVTTLADIDLDLIAQERLQAGSFDDDARGHTL PYRRVPFRVGPPEADLGLIRRIERFPFVPADPSRLAQDCYEAYNIQVAGLAKRLEATGTRKAIIGVSGGLDSTHALIVIA KAFDRLGYPRSDILAYTLPGFATSNATKTNAHALMKALGCTAAEIDIRPAAKQMLADMNHPFAKGEAVYDVTFENVQAGL RTDYLFRLANHAGGIVVGTGDLSELALGWCTYGVGDQMSHYAVNAGVPKTLIQHLIRWVIGNGEVGADEARTLQAVLDTE ISPELVPVDQDDSPQSTEGTIGPYALQDFNLFYTLRYGFRPSKIAFLALHAWGDRERGTWAPDFPETKRVAYELPEIRRW LGVFLTRYFGFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDGSARIWIDELNRNVPET >Mature_698_residues TRSHPSSGQVPVSPATSESPARFRSLYRHGFARVAACTGRSHPAEPERNADVILDLARTCHDSGAALAVFTELGLSAYAI EDLLLQQTLLDAVEAAAARVIAESANLRPLLLVGAPLRWRHRVYNCALAIQGGRLLGAVPKTFLPNYREFYEKRHFASGA GIAGETVRVAGRDAPFGTDLLFPAEDLPGLVVGVEICEDLWVPEPPGMRAALAGATVLANLSGSPITVGRAESRALLSRA ASMRGACAYVYAAAGQGESTTDLSWDGQTSIDELGVRLAEGERFPEKPVTTLADIDLDLIAQERLQAGSFDDDARGHTLP YRRVPFRVGPPEADLGLIRRIERFPFVPADPSRLAQDCYEAYNIQVAGLAKRLEATGTRKAIIGVSGGLDSTHALIVIAK AFDRLGYPRSDILAYTLPGFATSNATKTNAHALMKALGCTAAEIDIRPAAKQMLADMNHPFAKGEAVYDVTFENVQAGLR TDYLFRLANHAGGIVVGTGDLSELALGWCTYGVGDQMSHYAVNAGVPKTLIQHLIRWVIGNGEVGADEARTLQAVLDTEI SPELVPVDQDDSPQSTEGTIGPYALQDFNLFYTLRYGFRPSKIAFLALHAWGDRERGTWAPDFPETKRVAYELPEIRRWL GVFLTRYFGFSQFKRSALPNGPKVSAGGSLSPRGDWRAPSDGSARIWIDELNRNVPET
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17538756, Length=692, Percent_Identity=22.6878612716763, Blast_Score=88, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321865, Length=650, Percent_Identity=23.3846153846154, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24641841, Length=283, Percent_Identity=27.9151943462898, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641843, Length=283, Percent_Identity=27.9151943462898, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 75634; Mature: 75503
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSHPSSGQVPVSPATSESPARFRSLYRHGFARVAACTGRSHPAEPERNADVILDLART CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH CHDSGAALAVFTELGLSAYAIEDLLLQQTLLDAVEAAAARVIAESANLRPLLLVGAPLRW HCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH RHRVYNCALAIQGGRLLGAVPKTFLPNYREFYEKRHFASGAGIAGETVRVAGRDAPFGTD HHHHEEEEEEEECCEEEECCCHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC LLFPAEDLPGLVVGVEICEDLWVPEPPGMRAALAGATVLANLSGSPITVGRAESRALLSR CCCCCCCCCCCEEHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCEEECCCHHHHHHHH AASMRGACAYVYAAAGQGESTTDLSWDGQTSIDELGVRLAEGERFPEKPVTTLADIDLDL HHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCHHHHCCHHH IAQERLQAGSFDDDARGHTLPYRRVPFRVGPPEADLGLIRRIERFPFVPADPSRLAQDCY HHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH EAYNIQVAGLAKRLEATGTRKAIIGVSGGLDSTHALIVIAKAFDRLGYPRSDILAYTLPG HHHCEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHHEEHHHHHHHHCCCHHHEEEEECCC FATSNATKTNAHALMKALGCTAAEIDIRPAAKQMLADMNHPFAKGEAVYDVTFENVQAGL CCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHH RTDYLFRLANHAGGIVVGTGDLSELALGWCTYGVGDQMSHYAVNAGVPKTLIQHLIRWVI HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHH GNGEVGADEARTLQAVLDTEISPELVPVDQDDSPQSTEGTIGPYALQDFNLFYTLRYGFR CCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEECCC PSKIAFLALHAWGDRERGTWAPDFPETKRVAYELPEIRRWLGVFLTRYFGFSQFKRSALP CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC NGPKVSAGGSLSPRGDWRAPSDGSARIWIDELNRNVPET CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCC >Mature Secondary Structure TRSHPSSGQVPVSPATSESPARFRSLYRHGFARVAACTGRSHPAEPERNADVILDLART CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH CHDSGAALAVFTELGLSAYAIEDLLLQQTLLDAVEAAAARVIAESANLRPLLLVGAPLRW HCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH RHRVYNCALAIQGGRLLGAVPKTFLPNYREFYEKRHFASGAGIAGETVRVAGRDAPFGTD HHHHEEEEEEEECCEEEECCCHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC LLFPAEDLPGLVVGVEICEDLWVPEPPGMRAALAGATVLANLSGSPITVGRAESRALLSR CCCCCCCCCCCEEHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCEEECCCHHHHHHHH AASMRGACAYVYAAAGQGESTTDLSWDGQTSIDELGVRLAEGERFPEKPVTTLADIDLDL HHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCHHHHCCHHH IAQERLQAGSFDDDARGHTLPYRRVPFRVGPPEADLGLIRRIERFPFVPADPSRLAQDCY HHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH EAYNIQVAGLAKRLEATGTRKAIIGVSGGLDSTHALIVIAKAFDRLGYPRSDILAYTLPG HHHCEEEHHHHHHHHHCCCCEEEEEECCCCCCCHHHEEHHHHHHHHCCCHHHEEEEECCC FATSNATKTNAHALMKALGCTAAEIDIRPAAKQMLADMNHPFAKGEAVYDVTFENVQAGL CCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHH RTDYLFRLANHAGGIVVGTGDLSELALGWCTYGVGDQMSHYAVNAGVPKTLIQHLIRWVI HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHH GNGEVGADEARTLQAVLDTEISPELVPVDQDDSPQSTEGTIGPYALQDFNLFYTLRYGFR CCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEECCC PSKIAFLALHAWGDRERGTWAPDFPETKRVAYELPEIRRWLGVFLTRYFGFSQFKRSALP CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC NGPKVSAGGSLSPRGDWRAPSDGSARIWIDELNRNVPET CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]