| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gmk [H]
Identifier: 170750118
GI number: 170750118
Start: 3958573
End: 3959235
Strand: Direct
Name: gmk [H]
Synonym: Mrad2831_3720
Alternate gene names: 170750118
Gene position: 3958573-3959235 (Clockwise)
Preceding gene: 170750117
Following gene: 170750130
Centisome position: 65.13
GC content: 70.14
Gene sequence:
>663_bases ATGACCGAGGCGGCCGGGAACGTCTCCGACTCGATCGCGCGGCGCGGGTTGATCCTGATCCTCTCCTCGCCCTCCGGGGC GGGGAAGACCACCCTGACGCGGGCGATCGCGCAGGATCCGAGCTGGGCGCTCGACCTGTCGATCTCGGTGACCACGCGGG GGCGGCGGCCCTCGGAGATCGACGGGCGGCACTACCACTTCATTGATCGCGAGGCGTTCGACGACCTGCGCAACCGCGAC GACCTGCTCGAATGGGCCGAGGTCCACGGCAACTTCTACGGCACGCCCCGGCGGCCGGTGGAGAAGGTGCTCGGCTCCGG CCGGGACATGATCTTCGACATCGACTACCAGGGCACGCGGCAGGTTCGCTCCAAGCTCGCCCAGGACGTGGTGACGGTCT TCATCCTGCCGCCCAGCATGGCCGAGCTGCGCCAGCGCCTGGAGCGCCGGGCGGAGGATTCCGCCGAGACGATCGAGAAG CGTCTCGCCAACGCCCGGACGGAGATCCAGCGCTGGGTCGAGTACGACTACGTCATCGTCAACGACGACCTGCAGAACGC CTTCCGGGCCCTCCAGGGGATCCTGGCGGCCGAGCGTCTCCGGCGGGCGCGCCGCACCGGACTCGCCCCCTTCGTCGAGG GCCTGCTGGCCGAGACGCCGTGA
Upstream 100 bases:
>100_bases GAGCAGTTCCGCGAGCAGGTGCAGAACATCGAGTGATGCCGGGCACGATGCCGGATCGGGACGTGAGGATGCGGATGCGA AACGTCGGGGAGCCACGCGC
Downstream 100 bases:
>100_bases TCCGGCCCTAGCGACGGATCAGCACGACGCCGCCGATCAGGAGCGCGATCCCGAGGAGGCGCGGCAGGTCGACGGGCCGC TGCGCGAGGCCGAGCAGGCC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTEAAGNVSDSIARRGLILILSSPSGAGKTTLTRAIAQDPSWALDLSISVTTRGRRPSEIDGRHYHFIDREAFDDLRNRD DLLEWAEVHGNFYGTPRRPVEKVLGSGRDMIFDIDYQGTRQVRSKLAQDVVTVFILPPSMAELRQRLERRAEDSAETIEK RLANARTEIQRWVEYDYVIVNDDLQNAFRALQGILAAERLRRARRTGLAPFVEGLLAETP
Sequences:
>Translated_220_residues MTEAAGNVSDSIARRGLILILSSPSGAGKTTLTRAIAQDPSWALDLSISVTTRGRRPSEIDGRHYHFIDREAFDDLRNRD DLLEWAEVHGNFYGTPRRPVEKVLGSGRDMIFDIDYQGTRQVRSKLAQDVVTVFILPPSMAELRQRLERRAEDSAETIEK RLANARTEIQRWVEYDYVIVNDDLQNAFRALQGILAAERLRRARRTGLAPFVEGLLAETP >Mature_219_residues TEAAGNVSDSIARRGLILILSSPSGAGKTTLTRAIAQDPSWALDLSISVTTRGRRPSEIDGRHYHFIDREAFDDLRNRDD LLEWAEVHGNFYGTPRRPVEKVLGSGRDMIFDIDYQGTRQVRSKLAQDVVTVFILPPSMAELRQRLERRAEDSAETIEKR LANARTEIQRWVEYDYVIVNDDLQNAFRALQGILAAERLRRARRTGLAPFVEGLLAETP
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=194, Percent_Identity=38.1443298969072, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI4504221, Length=194, Percent_Identity=38.1443298969072, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI226874831, Length=194, Percent_Identity=38.1443298969072, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI14780902, Length=187, Percent_Identity=29.9465240641711, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI38570142, Length=184, Percent_Identity=29.8913043478261, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI21361598, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21536464, Length=186, Percent_Identity=24.1935483870968, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI262118263, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118259, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4505237, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI111154074, Length=160, Percent_Identity=28.75, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118255, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=192, Percent_Identity=46.3541666666667, Blast_Score=181, Evalue=2e-47, Organism=Caenorhabditis elegans, GI193203132, Length=182, Percent_Identity=36.2637362637363, Blast_Score=116, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17508835, Length=182, Percent_Identity=36.2637362637363, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17557440, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=184, Percent_Identity=36.4130434782609, Blast_Score=137, Evalue=1e-33, Organism=Drosophila melanogaster, GI21356141, Length=195, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI45554481, Length=176, Percent_Identity=30.1136363636364, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI85724806, Length=176, Percent_Identity=30.1136363636364, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24640542, Length=181, Percent_Identity=30.3867403314917, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI45554489, Length=176, Percent_Identity=30.1136363636364, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI116007136, Length=176, Percent_Identity=30.1136363636364, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI161077626, Length=181, Percent_Identity=30.3867403314917, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI45551002, Length=206, Percent_Identity=27.1844660194175, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI85816106, Length=206, Percent_Identity=27.1844660194175, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI85816281, Length=206, Percent_Identity=27.1844660194175, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 24891; Mature: 24760
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAAGNVSDSIARRGLILILSSPSGAGKTTLTRAIAQDPSWALDLSISVTTRGRRPSEI CCCCCCCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC DGRHYHFIDREAFDDLRNRDDLLEWAEVHGNFYGTPRRPVEKVLGSGRDMIFDIDYQGTR CCCEEEEECHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHH QVRSKLAQDVVTVFILPPSMAELRQRLERRAEDSAETIEKRLANARTEIQRWVEYDYVIV HHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEE NDDLQNAFRALQGILAAERLRRARRTGLAPFVEGLLAETP CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure TEAAGNVSDSIARRGLILILSSPSGAGKTTLTRAIAQDPSWALDLSISVTTRGRRPSEI CCCCCCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC DGRHYHFIDREAFDDLRNRDDLLEWAEVHGNFYGTPRRPVEKVLGSGRDMIFDIDYQGTR CCCEEEEECHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHH QVRSKLAQDVVTVFILPPSMAELRQRLERRAEDSAETIEKRLANARTEIQRWVEYDYVIV HHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEE NDDLQNAFRALQGILAAERLRRARRTGLAPFVEGLLAETP CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA