Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yedZ [H]

Identifier: 170750130

GI number: 170750130

Start: 3974074

End: 3975027

Strand: Direct

Name: yedZ [H]

Synonym: Mrad2831_3732

Alternate gene names: 170750130

Gene position: 3974074-3975027 (Clockwise)

Preceding gene: 170750118

Following gene: 170750131

Centisome position: 65.39

GC content: 71.7

Gene sequence:

>954_bases
ATGATCGATCGCTTGGCCGCTCCCCTCGGCATCCCGCTCCCCTGGCTCGACCGGGCCGGCCGTCTCTCCTGGCTGAAGCT
CGCGGTGTTCGCGGGCTGCGTCGCGCCCGCGCTCTACCTCGCGGCCGCCTACCGGCTCGACGCCCTCGGGGCGAAACCGA
TCACCGCCCTGATCCACGCCACCGGCGAGTGGGCCGTGCGCTTCCTGCTCTTCTCGCTGGCGATCTCGCCGCTGCGGCGC
CTCGCGGACTGGCCGAAGGTCATCGTCGTGCGGCGCATGCTCGGCGTCACCGTCATGGCCTACGCGGTGGCCCACCTCAC
CCTCTACGCCGTCGACCAGAATCTGATCCTCACCAAGGTGATCTCGGAGATCGCGCTCCGGCTCTACCTGATGATCGGCT
TCGTAGCCCTGGTCGGCTTGATCGCCTTGGGGTTGACCTCCACGGACGCGGCGATCCGCAATCTCGGCCCGAACTGGAAC
CGCCTGCACCGCCTCACCTACACGATCGCCGTGGCGGCCCTGGTCCACTACTTCCTGCAGTCGAAGATCGATGTCACCGA
CCCGGTCTTCTCGGCGGGCCTGTTCCTGCTGTTGATAGGCTGGCGGGTGATGCGGCGCTTCCAGTGGCCGGAGCGGCCCT
GGTCGCTCCTCCTCCTGGCGATCGTCGCCGGGCTCGCGACGGCCGGGCTGGAGGCCGCGTGGTACGGCCTCGCCAGCGGT
GTGCCGGCCAACCTCGTCCTCGCCGCCAACCTGGACTTCTCCGGGCCGATCCGGCCGGCCTGGTGGGTGCTGGCCGTCGG
CCTGTCGCTCCCGCTCGTGGCGCTCGTGCGCGGCCCGAAGGCCCCGGCACCGGGCAGGCGACCGGCCCAGGCGGCCCGCC
GGGAGCCGATCCGGGAACCCGTCCGGGAGCCCGTCCGGGAGCCCGTCCGGGAGCCCTTGTCGCCGTCGGCCTGA

Upstream 100 bases:

>100_bases
CGACCCGTGACGGCACCGATGGCCCGGGCAGCCGTTCCCGCCGGTGGCCCGGGCCATCGGCGCGGCGCCGTCGTCCACCG
CGAAGCTTCCGTTCGGACCC

Downstream 100 bases:

>100_bases
TGCCGCAGAACCCGCTCCCGGTCCTCCGCCGCCGGCGGCCCCGGGCCCAGCGGAGCTTTCGAGACGCCATGCGCGGCACG
CCTCTCCTGATCGCGGGCTT

Product: ferric reductase domain-containing protein

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHATGEWAVRFLLFSLAISPLRR
LADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKVISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWN
RLHRLTYTIAVAALVHYFLQSKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG
VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREPVREPVREPVREPLSPSA

Sequences:

>Translated_317_residues
MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHATGEWAVRFLLFSLAISPLRR
LADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKVISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWN
RLHRLTYTIAVAALVHYFLQSKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG
VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREPVREPVREPVREPLSPSA
>Mature_317_residues
MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHATGEWAVRFLLFSLAISPLRR
LADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKVISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWN
RLHRLTYTIAVAALVHYFLQSKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG
VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREPVREPVREPVREPLSPSA

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=175, Percent_Identity=38.8571428571429, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 34605; Mature: 34605

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHA
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TGEWAVRFLLFSLAISPLRRLADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWNRLHRLTYTIAVAALVHYFLQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREP
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHH
VREPVREPVREPLSPSA
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHA
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TGEWAVRFLLFSLAISPLRRLADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWNRLHRLTYTIAVAALVHYFLQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREP
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHH
VREPVREPVREPLSPSA
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]