| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yedZ [H]
Identifier: 170750130
GI number: 170750130
Start: 3974074
End: 3975027
Strand: Direct
Name: yedZ [H]
Synonym: Mrad2831_3732
Alternate gene names: 170750130
Gene position: 3974074-3975027 (Clockwise)
Preceding gene: 170750118
Following gene: 170750131
Centisome position: 65.39
GC content: 71.7
Gene sequence:
>954_bases ATGATCGATCGCTTGGCCGCTCCCCTCGGCATCCCGCTCCCCTGGCTCGACCGGGCCGGCCGTCTCTCCTGGCTGAAGCT CGCGGTGTTCGCGGGCTGCGTCGCGCCCGCGCTCTACCTCGCGGCCGCCTACCGGCTCGACGCCCTCGGGGCGAAACCGA TCACCGCCCTGATCCACGCCACCGGCGAGTGGGCCGTGCGCTTCCTGCTCTTCTCGCTGGCGATCTCGCCGCTGCGGCGC CTCGCGGACTGGCCGAAGGTCATCGTCGTGCGGCGCATGCTCGGCGTCACCGTCATGGCCTACGCGGTGGCCCACCTCAC CCTCTACGCCGTCGACCAGAATCTGATCCTCACCAAGGTGATCTCGGAGATCGCGCTCCGGCTCTACCTGATGATCGGCT TCGTAGCCCTGGTCGGCTTGATCGCCTTGGGGTTGACCTCCACGGACGCGGCGATCCGCAATCTCGGCCCGAACTGGAAC CGCCTGCACCGCCTCACCTACACGATCGCCGTGGCGGCCCTGGTCCACTACTTCCTGCAGTCGAAGATCGATGTCACCGA CCCGGTCTTCTCGGCGGGCCTGTTCCTGCTGTTGATAGGCTGGCGGGTGATGCGGCGCTTCCAGTGGCCGGAGCGGCCCT GGTCGCTCCTCCTCCTGGCGATCGTCGCCGGGCTCGCGACGGCCGGGCTGGAGGCCGCGTGGTACGGCCTCGCCAGCGGT GTGCCGGCCAACCTCGTCCTCGCCGCCAACCTGGACTTCTCCGGGCCGATCCGGCCGGCCTGGTGGGTGCTGGCCGTCGG CCTGTCGCTCCCGCTCGTGGCGCTCGTGCGCGGCCCGAAGGCCCCGGCACCGGGCAGGCGACCGGCCCAGGCGGCCCGCC GGGAGCCGATCCGGGAACCCGTCCGGGAGCCCGTCCGGGAGCCCGTCCGGGAGCCCTTGTCGCCGTCGGCCTGA
Upstream 100 bases:
>100_bases CGACCCGTGACGGCACCGATGGCCCGGGCAGCCGTTCCCGCCGGTGGCCCGGGCCATCGGCGCGGCGCCGTCGTCCACCG CGAAGCTTCCGTTCGGACCC
Downstream 100 bases:
>100_bases TGCCGCAGAACCCGCTCCCGGTCCTCCGCCGCCGGCGGCCCCGGGCCCAGCGGAGCTTTCGAGACGCCATGCGCGGCACG CCTCTCCTGATCGCGGGCTT
Product: ferric reductase domain-containing protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHATGEWAVRFLLFSLAISPLRR LADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKVISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWN RLHRLTYTIAVAALVHYFLQSKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREPVREPVREPVREPLSPSA
Sequences:
>Translated_317_residues MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHATGEWAVRFLLFSLAISPLRR LADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKVISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWN RLHRLTYTIAVAALVHYFLQSKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREPVREPVREPVREPLSPSA >Mature_317_residues MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHATGEWAVRFLLFSLAISPLRR LADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKVISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWN RLHRLTYTIAVAALVHYFLQSKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREPVREPVREPVREPLSPSA
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=175, Percent_Identity=38.8571428571429, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 34605; Mature: 34605
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHA CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TGEWAVRFLLFSLAISPLRRLADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWNRLHRLTYTIAVAALVHYFLQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREP CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHH VREPVREPVREPLSPSA HHHHHHHHHHCCCCCCC >Mature Secondary Structure MIDRLAAPLGIPLPWLDRAGRLSWLKLAVFAGCVAPALYLAAAYRLDALGAKPITALIHA CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TGEWAVRFLLFSLAISPLRRLADWPKVIVVRRMLGVTVMAYAVAHLTLYAVDQNLILTKV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ISEIALRLYLMIGFVALVGLIALGLTSTDAAIRNLGPNWNRLHRLTYTIAVAALVHYFLQ HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SKIDVTDPVFSAGLFLLLIGWRVMRRFQWPERPWSLLLLAIVAGLATAGLEAAWYGLASG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPANLVLAANLDFSGPIRPAWWVLAVGLSLPLVALVRGPKAPAPGRRPAQAARREPIREP CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHH VREPVREPVREPLSPSA HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]