| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fdxA [H]
Identifier: 170750106
GI number: 170750106
Start: 3946136
End: 3946474
Strand: Direct
Name: fdxA [H]
Synonym: Mrad2831_3707
Alternate gene names: 170750106
Gene position: 3946136-3946474 (Clockwise)
Preceding gene: 170750105
Following gene: 170750107
Centisome position: 64.93
GC content: 62.54
Gene sequence:
>339_bases ATGACCTACGTCGTCACCGACAATTGCATCAAGTGCAAGTACACGGACTGCGTCGAGGTCTGTCCGGTGGACTGCTTCTA CGAAGGCGAGAACATGCTCGTCATCCACCCGGACGAGTGCATCGACTGCGGCGTCTGCGAGCCGGAATGCCCGGCCGAGG CGATCAAGCCCGACACGGAGTCGAACCTCGACACGTGGCTGAAGCTGAACGCCGACTACGCCAAGAGCTGGCCGAACATC ACGCAGAAGAAGGAAGCCCCGGCCGACGCCAAGGAGTGGGACGGCAAGACCGGGAAGCTCGAGGCGCATTTCTCGCCTAA CCCCGGCTCGGGCGACTGA
Upstream 100 bases:
>100_bases GCCGTGTCTCACCGGCGTTCCCCTCGCAGCACCCTCCGGGCGCGCGGGCCGTCTCCAGGCTCCGCCCGGGCCAAGTCGAG TTTTAGGACGAAGACATCCG
Downstream 100 bases:
>100_bases AGCCCGGCCTCGGAGGTTCTGGCGTCGGCCCGCGGCTCGCTCTCCAGATCGCAGGAAGATCTGCCGAGCCCGTCTCGCCG CTGAACCGCGCGGCGGGGCT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: Ferredoxin II; FdII [H]
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTESNLDTWLKLNADYAKSWPNI TQKKEAPADAKEWDGKTGKLEAHFSPNPGSGD
Sequences:
>Translated_112_residues MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTESNLDTWLKLNADYAKSWPNI TQKKEAPADAKEWDGKTGKLEAHFSPNPGSGD >Mature_111_residues TYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTESNLDTWLKLNADYAKSWPNIT QKKEAPADAKEWDGKTGKLEAHFSPNPGSGD
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR000813 - InterPro: IPR022569 [H]
Pfam domain/function: PF11953 DUF3470; PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 12436; Mature: 12305
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 8.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE CEEEECCCEEEEECCCCHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCC SNLDTWLKLNADYAKSWPNITQKKEAPADAKEWDGKTGKLEAHFSPNPGSGD CCCEEEEEECCCHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure TYVVTDNCIKCKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPAEAIKPDTE EEEECCCEEEEECCCCHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCC SNLDTWLKLNADYAKSWPNITQKKEAPADAKEWDGKTGKLEAHFSPNPGSGD CCCEEEEEECCCHHHCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2388848; 2071578; 2277040 [H]