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The map label for this gene is arpC [H]

Identifier: 170750087

GI number: 170750087

Start: 3926474

End: 3928009

Strand: Direct

Name: arpC [H]

Synonym: Mrad2831_3688

Alternate gene names: 170750087

Gene position: 3926474-3928009 (Clockwise)

Preceding gene: 170750086

Following gene: 170750092

Centisome position: 64.6

GC content: 71.42

Gene sequence:

>1536_bases
ATGGTGAGCTTTGCGCCGAGACGGTGCGGACGGGCGACCGCGTGGCTGGCGGCCTCCCTCGGCCTGTCGGCCTGCGCGGT
CGGCCCGAACTACGTGGCGCCCGAGGCTCCGCCGGTCGGCCGCTACACCAAGGAACCGCTGCAGAATCCCTCCGCGGCCG
ACAAGATCCGGACCCGGCAGGGCGGCTCGGCCGACCAGAGCTTCGTCTCCGGCGCCGATATTCCTGGCTCGTGGTGGACC
CTGTTCCACTCGAAGGCGCTGAACCGTCTCGTCGAGCAGGCGCTCGCCAACAACCCGACGCTGGAGGCGGCGCAGGCCTC
CCTGCGGGTGGCGCAGCAGAACGTGCTCGCCCAGAAGGGCACGCTCTATCCGAGCCTGACCGCGACGCCGCAGATCCAGG
GGGCGCTGGCGCCCGGTCTCGACCTGCAATCGCCCCTCAACAACCAGAACCAGTATCTCTACAGCCTGTCCACGCCGCAG
GCGGTGGTCTCGTACAATCCCGACGTGTTCGGCGGGAACCGCCGGCAGATCGAGTCCCTGGAGGCCACCACCGAGAACCA
GCGGTTCCAGCTGGAAGCGGCCTACCTGAGCCTGACCGCCAACGTCGTCGCCGCCGCGATCCAGGAAGCGTCCCTGCGCG
CGCAGATCGACGCGACCCGCAAGGTGATCCAGGCGCAGACCGAGGTGCTGCAGCTCTACAACAAGCAGCTGTCGCTGGGT
CAGATCGCCGGGGCCGACGTGGTGCAGCAGCAGGCGGCGCTGGCGCTGTCGCAGCAGCTGCTGCCGCCGCTGGAGAAGGC
GCTCGCCCAGCAGCGCAACCTGCTGACCGCGCTGGCAGGACGCCTGCCCTCCGACGAGGTCTCCGAGACCTTCGACCTCG
CCGCCCTGCGCCTGCCGACCCGGCTTCCGGTGAGCCTGCCCTCGCGGCTCGTGCAGCAGCGGCCCGACGTGAAGGCGGCG
GAGGCCCTGGTGCAGCAGGCGAGCGCCAATGTCGGCGTCGCGGTGGCGAACCGCCTGCCGCAGTTCAGCCTGACCGCTAC
GGGCGGCTCCAGCGCCACGCGGATCGCGCAGGTGACCAGTCCGGGCGCGGCGTTCTTCACGATCATCGGGCAGGCGACGG
CGCCGATCTTCGATGCCGGCACCCTGTTCCGGCGGCAGCGCGCCGCCGAGGAATCGCTGACGGAGGCGCAGGCGCAGTAC
AAGGCGACGGTGATCACCGCCTTCCAGAACGTCGCGGACGCACTGCGGGCGCTCCAGGCCGACGCGAAGGCCGTGGCCGC
TGCCGACGCCGCGGTGAGCGCCACGAACCAGAGCCTCGCGCTGATCCGCAAGCAGTACACCGCCGGGGCGATCACCTCCT
CGCAGGTGCTGATCGCCCAGCAGGGCTATCTCTCGGCGCTGGTGACCTCGGCGGCGGCGCGGGCCACCCAGTACGCCGAC
ACCGCCGCCCTGTTCGTGGCCCTGGGCGGCGGCTGGTGGAACCGCGCCGACGTGGCGCCGCCCCCGCCCGAGAAGGACCC
GCTGAAGTTCCTCTGA

Upstream 100 bases:

>100_bases
GGCGCCACAACGGCCTCGCCGCGCGCGCCATCTGGGACCGGTCGGATTGACTTGGCAGCGGGTCGCGCCGCTCTACCGAG
GTGAGCTTTTCGGGGGCGGG

Downstream 100 bases:

>100_bases
CGGGGTCGCGTCAGGTGTACATCGCGATGGCGTCCTGCAGCATCTGGTCGGTGGTGCTCATGACCTTGGTGTTGGCCGTG
TAGGCCTGCTGGGTCTCGAT

Product: RND efflux system outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MVSFAPRRCGRATAWLAASLGLSACAVGPNYVAPEAPPVGRYTKEPLQNPSAADKIRTRQGGSADQSFVSGADIPGSWWT
LFHSKALNRLVEQALANNPTLEAAQASLRVAQQNVLAQKGTLYPSLTATPQIQGALAPGLDLQSPLNNQNQYLYSLSTPQ
AVVSYNPDVFGGNRRQIESLEATTENQRFQLEAAYLSLTANVVAAAIQEASLRAQIDATRKVIQAQTEVLQLYNKQLSLG
QIAGADVVQQQAALALSQQLLPPLEKALAQQRNLLTALAGRLPSDEVSETFDLAALRLPTRLPVSLPSRLVQQRPDVKAA
EALVQQASANVGVAVANRLPQFSLTATGGSSATRIAQVTSPGAAFFTIIGQATAPIFDAGTLFRRQRAAEESLTEAQAQY
KATVITAFQNVADALRALQADAKAVAAADAAVSATNQSLALIRKQYTAGAITSSQVLIAQQGYLSALVTSAAARATQYAD
TAALFVALGGGWWNRADVAPPPPEKDPLKFL

Sequences:

>Translated_511_residues
MVSFAPRRCGRATAWLAASLGLSACAVGPNYVAPEAPPVGRYTKEPLQNPSAADKIRTRQGGSADQSFVSGADIPGSWWT
LFHSKALNRLVEQALANNPTLEAAQASLRVAQQNVLAQKGTLYPSLTATPQIQGALAPGLDLQSPLNNQNQYLYSLSTPQ
AVVSYNPDVFGGNRRQIESLEATTENQRFQLEAAYLSLTANVVAAAIQEASLRAQIDATRKVIQAQTEVLQLYNKQLSLG
QIAGADVVQQQAALALSQQLLPPLEKALAQQRNLLTALAGRLPSDEVSETFDLAALRLPTRLPVSLPSRLVQQRPDVKAA
EALVQQASANVGVAVANRLPQFSLTATGGSSATRIAQVTSPGAAFFTIIGQATAPIFDAGTLFRRQRAAEESLTEAQAQY
KATVITAFQNVADALRALQADAKAVAAADAAVSATNQSLALIRKQYTAGAITSSQVLIAQQGYLSALVTSAAARATQYAD
TAALFVALGGGWWNRADVAPPPPEKDPLKFL
>Mature_511_residues
MVSFAPRRCGRATAWLAASLGLSACAVGPNYVAPEAPPVGRYTKEPLQNPSAADKIRTRQGGSADQSFVSGADIPGSWWT
LFHSKALNRLVEQALANNPTLEAAQASLRVAQQNVLAQKGTLYPSLTATPQIQGALAPGLDLQSPLNNQNQYLYSLSTPQ
AVVSYNPDVFGGNRRQIESLEATTENQRFQLEAAYLSLTANVVAAAIQEASLRAQIDATRKVIQAQTEVLQLYNKQLSLG
QIAGADVVQQQAALALSQQLLPPLEKALAQQRNLLTALAGRLPSDEVSETFDLAALRLPTRLPVSLPSRLVQQRPDVKAA
EALVQQASANVGVAVANRLPQFSLTATGGSSATRIAQVTSPGAAFFTIIGQATAPIFDAGTLFRRQRAAEESLTEAQAQY
KATVITAFQNVADALRALQADAKAVAAADAAVSATNQSLALIRKQYTAGAITSSQVLIAQQGYLSALVTSAAARATQYAD
TAALFVALGGGWWNRADVAPPPPEKDPLKFL

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=489, Percent_Identity=22.9038854805726, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53972; Mature: 53972

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFAPRRCGRATAWLAASLGLSACAVGPNYVAPEAPPVGRYTKEPLQNPSAADKIRTRQ
CCCCCCCCCCCHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCC
GGSADQSFVSGADIPGSWWTLFHSKALNRLVEQALANNPTLEAAQASLRVAQQNVLAQKG
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
TLYPSLTATPQIQGALAPGLDLQSPLNNQNQYLYSLSTPQAVVSYNPDVFGGNRRQIESL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHH
EATTENQRFQLEAAYLSLTANVVAAAIQEASLRAQIDATRKVIQAQTEVLQLYNKQLSLG
HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QIAGADVVQQQAALALSQQLLPPLEKALAQQRNLLTALAGRLPSDEVSETFDLAALRLPT
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RLPVSLPSRLVQQRPDVKAAEALVQQASANVGVAVANRLPQFSLTATGGSSATRIAQVTS
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCEEEEECC
PGAAFFTIIGQATAPIFDAGTLFRRQRAAEESLTEAQAQYKATVITAFQNVADALRALQA
CCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAKAVAAADAAVSATNQSLALIRKQYTAGAITSSQVLIAQQGYLSALVTSAAARATQYAD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
TAALFVALGGGWWNRADVAPPPPEKDPLKFL
HHEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSFAPRRCGRATAWLAASLGLSACAVGPNYVAPEAPPVGRYTKEPLQNPSAADKIRTRQ
CCCCCCCCCCCHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCC
GGSADQSFVSGADIPGSWWTLFHSKALNRLVEQALANNPTLEAAQASLRVAQQNVLAQKG
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
TLYPSLTATPQIQGALAPGLDLQSPLNNQNQYLYSLSTPQAVVSYNPDVFGGNRRQIESL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHH
EATTENQRFQLEAAYLSLTANVVAAAIQEASLRAQIDATRKVIQAQTEVLQLYNKQLSLG
HHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QIAGADVVQQQAALALSQQLLPPLEKALAQQRNLLTALAGRLPSDEVSETFDLAALRLPT
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
RLPVSLPSRLVQQRPDVKAAEALVQQASANVGVAVANRLPQFSLTATGGSSATRIAQVTS
CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCEEEEECC
PGAAFFTIIGQATAPIFDAGTLFRRQRAAEESLTEAQAQYKATVITAFQNVADALRALQA
CCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAKAVAAADAAVSATNQSLALIRKQYTAGAITSSQVLIAQQGYLSALVTSAAARATQYAD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
TAALFVALGGGWWNRADVAPPPPEKDPLKFL
HHEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]