| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is mcp2 [H]
Identifier: 170750073
GI number: 170750073
Start: 3905942
End: 3908044
Strand: Reverse
Name: mcp2 [H]
Synonym: Mrad2831_3674
Alternate gene names: 170750073
Gene position: 3908044-3905942 (Counterclockwise)
Preceding gene: 170750074
Following gene: 170750069
Centisome position: 64.3
GC content: 75.42
Gene sequence:
>2103_bases ATGCTGCGTCTTCCGCGTCCTTCGATCGGCACGATCCTGTGCGCGATCCTGTTCTCACTCAGCGCCATGCTGCTGGCCGC GGGCGCCCGGACGGCACACGATGCCCGCGCGCAGGAGCGGGAGAGCCGCCGCGTGGTCGCGCTCACGGAAGGCAGCCGGA TCCTCCTCGAGGTCCTGCTCGCCGTGCGCCTCGAGCGGGCACGGACTCTGCAGGCGCTGATCGCCGCGGGCAGGATCCCG CCCGCCGACGCGGCCCTGATCGCCCGACAGCGCGCGACCCGGACCGAACGGCTGGAGGCTCTCCTGATCCTGGTGCGCGC GATCGACACCGCCGCGGTGGCGAAGACGGTCGATCCGCTCCGACGCGCGCACGAGGCCGTCACCGGCCTGTCCGCGCGGA TCGACGCGGCCCTCTCGGTCCCGATCGCGGAGCGCGCCGCCGCGACCGCGGAGGTCGCCGCGACCGCTTTCCGGGATCTG CTCGACGCGCTCTCGGCGACCAGCGGGGCCGTCGACGTCACGATCCCGCGCCGCGACGCGGCGCTGGCCCGCGCCCTGGA CATCAAGCGTGCCGCCTGGATCACGCGGGTCGCGATCGGCGGCAACGTGGCGCGGGCCGAGACGGCCGTGACGCGGGGGA CGGGCTGGTCCGAGGAGGAGCGCCTCGCCGAGGCCGAGGAGCGCGGCCGCGTCGCGGCGAGCTGGGCGAACCTCGTCGAA CACATGGACGACACGCTGCCGCGGGAGGTCCAGGACGCCTTCGTGAGGGCGGGCGCCAGCAACTTCGAGGGCGAGGTCGC GGCGCGGCGGCAGGCCCTGCGGGCGGCCCTGAGCCGGGGCCAGTCGCCGGGCGTCGCGATCCAGGACCTTCGTGACCGCA ACACGCGGGAGGTCAACACCATCGCCGACCTCGCCCAGGCGGCGCTGAACGCGATGGTCGCCCGCGCGCAGGCGCTCGCC GCGGAGGCGGAGGCGACGCTGCTCCACACCAGCCTGTTCCTGGCCGCCTCGGTGGTGCTCGCCGGTGTCGGCGCCGTCAC GGTCTTCCGCCGCGTGCTCGGACCGCTGCAGGCCATGATCCGGGCGATGCGGGCGCTCGCCTCCGGGAACGTCGCCGTGG AGATCCCGGCCCGCGGACGGCGGGACGAGATCGGCGCGATGGCGGCGGCCGTGCAGGTCTTCCGCGACAACCTCGTCCGC ACCCGCGCCCTGGAGGCGGACGCGGCCGAAGCGGCGCGCGCCGCGGAGGCGCAGCGCCGGACGATGACGCACACGCTGGC GCAGACCTTCGAGGCGGCGGTGGCCGGCATCGTCGGGCAGGTCTCCGCAGCCGCGACCGAGCTGCAGACCACGGCCTGGC AGATGACCACGACCGCCCAGGAGACCGCCAGCCAGTCCGATACCGTGGCCGCCGCCGCCGAGGAGGCCTCTGCCGGCGTC AGGACCGCCGCCGCCGCGGTGGAGGAGCTCGGCACCTCCGTCCAGGAGATCGGCCGGCAGGTCCAGGGCTCGTCCGAACT GGCCCGGATCGCGGTCGGCGAGGCCGACCAGACGGCCGCCCTGGTGGCGGCGCTCAACGCGTCCGTCGCCCGGGTCGACG CCGTCGTCGAACTGATCGCCGGCATCGCCGCTCAGACGAACCTGCTCGCGCTCAACGCCACGATCGAGGCGGCGCGGGCC GGTCAGGCCGGGCGCGGCTTCGCGGTGGTCGCCACCGAGGTCAAGGAGCTGGCCGCTCAGACCGGCCGCGCCACCGACGA GATCGGCCGGCAGATCGGCGAGATCCGGACCGTGACCGGTCAGGCGGTGCGGGCGATCGGCACGATCACCGGCCGGATCG GCGAGATCGACACCGTGGCCGCCGCCATCGCGGCCGCGGTGGAGCAGCAGGGGGCGGCCACGCGGGAGATCGTCCGCAAC GTCGCCCAGGCCAGTGTTGGCACGCAGGAGGTGACCGGCAACATCGCCGGGGTGGCGCAGGCGGCCGACCAGACCGGGCG CGCGGCCGACCACGTGCTCACGGCCGCCACCGCGCTCACGCGTCAGTCGGAGGAACTCGCCGCGGAGGTCCACCGCTTCC TGGCGGGCGTCCGGGCCGCGTGA
Upstream 100 bases:
>100_bases CTTTCCGGCGACCGAGGCCGACCGGCCGCCCTGCTCGAACCGGGCAGCCCGGCGGCGGGCCGCACGTCTCGACGCACTGC GAAGAGAGAACTCGATCCTC
Downstream 100 bases:
>100_bases TCCGTCTTGCCCGGCTCAGTCGAACCCGCGGGTGAAGCTGAGCCGGTGATGCGCGCTGCGCCCGAGCTGCGTCAGGCCGG CGCGGTGGACGGCCGTCCCG
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 700
Protein sequence:
>700_residues MLRLPRPSIGTILCAILFSLSAMLLAAGARTAHDARAQERESRRVVALTEGSRILLEVLLAVRLERARTLQALIAAGRIP PADAALIARQRATRTERLEALLILVRAIDTAAVAKTVDPLRRAHEAVTGLSARIDAALSVPIAERAAATAEVAATAFRDL LDALSATSGAVDVTIPRRDAALARALDIKRAAWITRVAIGGNVARAETAVTRGTGWSEEERLAEAEERGRVAASWANLVE HMDDTLPREVQDAFVRAGASNFEGEVAARRQALRAALSRGQSPGVAIQDLRDRNTREVNTIADLAQAALNAMVARAQALA AEAEATLLHTSLFLAASVVLAGVGAVTVFRRVLGPLQAMIRAMRALASGNVAVEIPARGRRDEIGAMAAAVQVFRDNLVR TRALEADAAEAARAAEAQRRTMTHTLAQTFEAAVAGIVGQVSAAATELQTTAWQMTTTAQETASQSDTVAAAAEEASAGV RTAAAAVEELGTSVQEIGRQVQGSSELARIAVGEADQTAALVAALNASVARVDAVVELIAGIAAQTNLLALNATIEAARA GQAGRGFAVVATEVKELAAQTGRATDEIGRQIGEIRTVTGQAVRAIGTITGRIGEIDTVAAAIAAAVEQQGAATREIVRN VAQASVGTQEVTGNIAGVAQAADQTGRAADHVLTAATALTRQSEELAAEVHRFLAGVRAA
Sequences:
>Translated_700_residues MLRLPRPSIGTILCAILFSLSAMLLAAGARTAHDARAQERESRRVVALTEGSRILLEVLLAVRLERARTLQALIAAGRIP PADAALIARQRATRTERLEALLILVRAIDTAAVAKTVDPLRRAHEAVTGLSARIDAALSVPIAERAAATAEVAATAFRDL LDALSATSGAVDVTIPRRDAALARALDIKRAAWITRVAIGGNVARAETAVTRGTGWSEEERLAEAEERGRVAASWANLVE HMDDTLPREVQDAFVRAGASNFEGEVAARRQALRAALSRGQSPGVAIQDLRDRNTREVNTIADLAQAALNAMVARAQALA AEAEATLLHTSLFLAASVVLAGVGAVTVFRRVLGPLQAMIRAMRALASGNVAVEIPARGRRDEIGAMAAAVQVFRDNLVR TRALEADAAEAARAAEAQRRTMTHTLAQTFEAAVAGIVGQVSAAATELQTTAWQMTTTAQETASQSDTVAAAAEEASAGV RTAAAAVEELGTSVQEIGRQVQGSSELARIAVGEADQTAALVAALNASVARVDAVVELIAGIAAQTNLLALNATIEAARA GQAGRGFAVVATEVKELAAQTGRATDEIGRQIGEIRTVTGQAVRAIGTITGRIGEIDTVAAAIAAAVEQQGAATREIVRN VAQASVGTQEVTGNIAGVAQAADQTGRAADHVLTAATALTRQSEELAAEVHRFLAGVRAA >Mature_700_residues MLRLPRPSIGTILCAILFSLSAMLLAAGARTAHDARAQERESRRVVALTEGSRILLEVLLAVRLERARTLQALIAAGRIP PADAALIARQRATRTERLEALLILVRAIDTAAVAKTVDPLRRAHEAVTGLSARIDAALSVPIAERAAATAEVAATAFRDL LDALSATSGAVDVTIPRRDAALARALDIKRAAWITRVAIGGNVARAETAVTRGTGWSEEERLAEAEERGRVAASWANLVE HMDDTLPREVQDAFVRAGASNFEGEVAARRQALRAALSRGQSPGVAIQDLRDRNTREVNTIADLAQAALNAMVARAQALA AEAEATLLHTSLFLAASVVLAGVGAVTVFRRVLGPLQAMIRAMRALASGNVAVEIPARGRRDEIGAMAAAVQVFRDNLVR TRALEADAAEAARAAEAQRRTMTHTLAQTFEAAVAGIVGQVSAAATELQTTAWQMTTTAQETASQSDTVAAAAEEASAGV RTAAAAVEELGTSVQEIGRQVQGSSELARIAVGEADQTAALVAALNASVARVDAVVELIAGIAAQTNLLALNATIEAARA GQAGRGFAVVATEVKELAAQTGRATDEIGRQIGEIRTVTGQAVRAIGTITGRIGEIDTVAAAIAAAVEQQGAATREIVRN VAQASVGTQEVTGNIAGVAQAADQTGRAADHVLTAATALTRQSEELAAEVHRFLAGVRAA
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1787690, Length=370, Percent_Identity=27.5675675675676, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788195, Length=343, Percent_Identity=26.2390670553936, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI1788194, Length=236, Percent_Identity=29.6610169491525, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI2367378, Length=350, Percent_Identity=26.2857142857143, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789453, Length=130, Percent_Identity=34.6153846153846, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 - InterPro: IPR000727 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 72651; Mature: 72651
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLPRPSIGTILCAILFSLSAMLLAAGARTAHDARAQERESRRVVALTEGSRILLEVLL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHH AVRLERARTLQALIAAGRIPPADAALIARQRATRTERLEALLILVRAIDTAAVAKTVDPL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRAHEAVTGLSARIDAALSVPIAERAAATAEVAATAFRDLLDALSATSGAVDVTIPRRDA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH ALARALDIKRAAWITRVAIGGNVARAETAVTRGTGWSEEERLAEAEERGRVAASWANLVE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH HMDDTLPREVQDAFVRAGASNFEGEVAARRQALRAALSRGQSPGVAIQDLRDRNTREVNT HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHH IADLAQAALNAMVARAQALAAEAEATLLHTSLFLAASVVLAGVGAVTVFRRVLGPLQAMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAMRALASGNVAVEIPARGRRDEIGAMAAAVQVFRDNLVRTRALEADAAEAARAAEAQRR HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMTHTLAQTFEAAVAGIVGQVSAAATELQTTAWQMTTTAQETASQSDTVAAAAEEASAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RTAAAAVEELGTSVQEIGRQVQGSSELARIAVGEADQTAALVAALNASVARVDAVVELIA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GIAAQTNLLALNATIEAARAGQAGRGFAVVATEVKELAAQTGRATDEIGRQIGEIRTVTG HHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QAVRAIGTITGRIGEIDTVAAAIAAAVEQQGAATREIVRNVAQASVGTQEVTGNIAGVAQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHH AADQTGRAADHVLTAATALTRQSEELAAEVHRFLAGVRAA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRLPRPSIGTILCAILFSLSAMLLAAGARTAHDARAQERESRRVVALTEGSRILLEVLL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHH AVRLERARTLQALIAAGRIPPADAALIARQRATRTERLEALLILVRAIDTAAVAKTVDPL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRAHEAVTGLSARIDAALSVPIAERAAATAEVAATAFRDLLDALSATSGAVDVTIPRRDA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH ALARALDIKRAAWITRVAIGGNVARAETAVTRGTGWSEEERLAEAEERGRVAASWANLVE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHH HMDDTLPREVQDAFVRAGASNFEGEVAARRQALRAALSRGQSPGVAIQDLRDRNTREVNT HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHH IADLAQAALNAMVARAQALAAEAEATLLHTSLFLAASVVLAGVGAVTVFRRVLGPLQAMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAMRALASGNVAVEIPARGRRDEIGAMAAAVQVFRDNLVRTRALEADAAEAARAAEAQRR HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMTHTLAQTFEAAVAGIVGQVSAAATELQTTAWQMTTTAQETASQSDTVAAAAEEASAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RTAAAAVEELGTSVQEIGRQVQGSSELARIAVGEADQTAALVAALNASVARVDAVVELIA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GIAAQTNLLALNATIEAARAGQAGRGFAVVATEVKELAAQTGRATDEIGRQIGEIRTVTG HHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QAVRAIGTITGRIGEIDTVAAAIAAAVEQQGAATREIVRNVAQASVGTQEVTGNIAGVAQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHH AADQTGRAADHVLTAATALTRQSEELAAEVHRFLAGVRAA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]