| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is sgaA [H]
Identifier: 170750069
GI number: 170750069
Start: 3901589
End: 3902797
Strand: Reverse
Name: sgaA [H]
Synonym: Mrad2831_3670
Alternate gene names: 170750069
Gene position: 3902797-3901589 (Counterclockwise)
Preceding gene: 170750073
Following gene: 170750068
Centisome position: 64.21
GC content: 69.4
Gene sequence:
>1209_bases ATGGCCGCAACCCGGCGCCCCGGTCGCAACCACCTCTTCATCCCGGGCCCCACCAACATCCCGGAGCGCGTCCTGCGCGC CATGCACGTGCCGTCCGAGGATCACCGGTCGCCGAGCTTCCCCGAGCTGGTGAAGCCGCTGCTGCAGGACTCCAAGATGG TGTTCGGCTCGACCAACGGGACGGTCATCCTGTTCCCGTCCTCGGGCACCGGCATCTGGGAATCAGCCCTGTCCAACACC CTCTGCCGCGGCGACAAGGTGCTCACCGCCCGCTACGGCCAGTTCAGCCACCTCTGGGTCGACATGGCCCAGCGCCTCGG CCTCGACGTGATCGTCCAGGAGGAGGAGTGGGGCGCGGGCGCCGACCCGCAGAAGATCGAGGAGGCGCTGCGCGCCGACA AGGACCACGCCATCAAGGCCGTGATGGTCGTCCACAACGAGACCGCCACGGGCGTCACCAGCGACATCGGCGCGGTGCGC AAGGCGATCGACGCCGCCGGCCACCCGGCGCTGCTGTTCGTGGACGGCATCTCGTCGATCGGCTCGCTGCCGTTCAAGAT GGACGAGTGGGGCGTCGACTGCGCCATCGCGGGCTCGCAGAAGGGCTTCATGCTCCCGGCCGGCCTCGGCCTGATCTGCA TCAGCCCGAAGGCGCTCAAGATCGCCGAGGGCGGCACCGGCCGCAACGACCGGCTCGGCCACGCCTACTTCGCCTGGAAG GACCAGCTGGCCGCCAACGCCACCGGCTACTTCCCCTACACCCCCGTCCTGCCGCTGCTCTACGGCCTGCGCGAGGCGCT GGCGATCGTGAAGGAGGAGGGGCTGGAGAACGTCTACCACCGCCATCACGTGCTCGCCGAGGCGACCCGTCAGGCCGTGG CGGCCTGGGGCCTCAAGCCCTGCGCCAAGGAGCCCAAGTGGAACTCCGACACGGTCACGGCGATCGTCGTGCCAGAGGGT GCCGACGCCGCCAAGGTGATCACCCACGCCTACGAGCGCTACAACCTGTCGCTCGGTGCCGGCCTGTCGAAAGTCGCCGG CAAGGTATTCCGCATCGGCCACCTCGGCGACCTGAACGAGCTGTCGCTGCTGGGCGCCATCGCGGGCGCCGAGATGGCCA TGCTCGATTGCGGCATCAAGGTCACGCCGGGCTCGGGCGTCGCCGCCGCCTCCAGCTACCTGCGCGAGAATCCGCTGCAT AAGGCGTGA
Upstream 100 bases:
>100_bases CGAGCCGCTTTCGACGGCGCCGGACCGACTCCCTGAGGACGCTTGGACAACCCGGCGCGGGTTCACGCCCGCGCGCAATG GACTTTTCGGAGGAAACATC
Downstream 100 bases:
>100_bases ACTGCGCACGCGATCGGGGCGGGACCGGGTTGCCGGGCCCGCCCCGACGCGCAAGTAAGAACAAGACTATCGAGGAAACC GCCCGTCGTTCGAGAGGGGT
Product: class V aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAATRRPGRNHLFIPGPTNIPERVLRAMHVPSEDHRSPSFPELVKPLLQDSKMVFGSTNGTVILFPSSGTGIWESALSNT LCRGDKVLTARYGQFSHLWVDMAQRLGLDVIVQEEEWGAGADPQKIEEALRADKDHAIKAVMVVHNETATGVTSDIGAVR KAIDAAGHPALLFVDGISSIGSLPFKMDEWGVDCAIAGSQKGFMLPAGLGLICISPKALKIAEGGTGRNDRLGHAYFAWK DQLAANATGYFPYTPVLPLLYGLREALAIVKEEGLENVYHRHHVLAEATRQAVAAWGLKPCAKEPKWNSDTVTAIVVPEG ADAAKVITHAYERYNLSLGAGLSKVAGKVFRIGHLGDLNELSLLGAIAGAEMAMLDCGIKVTPGSGVAAASSYLRENPLH KA
Sequences:
>Translated_402_residues MAATRRPGRNHLFIPGPTNIPERVLRAMHVPSEDHRSPSFPELVKPLLQDSKMVFGSTNGTVILFPSSGTGIWESALSNT LCRGDKVLTARYGQFSHLWVDMAQRLGLDVIVQEEEWGAGADPQKIEEALRADKDHAIKAVMVVHNETATGVTSDIGAVR KAIDAAGHPALLFVDGISSIGSLPFKMDEWGVDCAIAGSQKGFMLPAGLGLICISPKALKIAEGGTGRNDRLGHAYFAWK DQLAANATGYFPYTPVLPLLYGLREALAIVKEEGLENVYHRHHVLAEATRQAVAAWGLKPCAKEPKWNSDTVTAIVVPEG ADAAKVITHAYERYNLSLGAGLSKVAGKVFRIGHLGDLNELSLLGAIAGAEMAMLDCGIKVTPGSGVAAASSYLRENPLH KA >Mature_401_residues AATRRPGRNHLFIPGPTNIPERVLRAMHVPSEDHRSPSFPELVKPLLQDSKMVFGSTNGTVILFPSSGTGIWESALSNTL CRGDKVLTARYGQFSHLWVDMAQRLGLDVIVQEEEWGAGADPQKIEEALRADKDHAIKAVMVVHNETATGVTSDIGAVRK AIDAAGHPALLFVDGISSIGSLPFKMDEWGVDCAIAGSQKGFMLPAGLGLICISPKALKIAEGGTGRNDRLGHAYFAWKD QLAANATGYFPYTPVLPLLYGLREALAIVKEEGLENVYHRHHVLAEATRQAVAAWGLKPCAKEPKWNSDTVTAIVVPEGA DAAKVITHAYERYNLSLGAGLSKVAGKVFRIGHLGDLNELSLLGAIAGAEMAMLDCGIKVTPGSGVAAASSYLRENPLHK A
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=355, Percent_Identity=30.4225352112676, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17536281, Length=356, Percent_Identity=27.5280898876405, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6321079, Length=364, Percent_Identity=29.9450549450549, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI17530823, Length=353, Percent_Identity=30.5949008498584, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42993; Mature: 42862
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATRRPGRNHLFIPGPTNIPERVLRAMHVPSEDHRSPSFPELVKPLLQDSKMVFGSTNG CCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC TVILFPSSGTGIWESALSNTLCRGDKVLTARYGQFSHLWVDMAQRLGLDVIVQEEEWGAG EEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCC ADPQKIEEALRADKDHAIKAVMVVHNETATGVTSDIGAVRKAIDAAGHPALLFVDGISSI CCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHH GSLPFKMDEWGVDCAIAGSQKGFMLPAGLGLICISPKALKIAEGGTGRNDRLGHAYFAWK CCCCCEECCCCCCEEEECCCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCCEEEHHH DQLAANATGYFPYTPVLPLLYGLREALAIVKEEGLENVYHRHHVLAEATRQAVAAWGLKP HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC CAKEPKWNSDTVTAIVVPEGADAAKVITHAYERYNLSLGAGLSKVAGKVFRIGHLGDLNE CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHEEECCCCCCHH LSLLGAIAGAEMAMLDCGIKVTPGSGVAAASSYLRENPLHKA HHHHHHHHCCCEEEEECCCEECCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure AATRRPGRNHLFIPGPTNIPERVLRAMHVPSEDHRSPSFPELVKPLLQDSKMVFGSTNG CCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC TVILFPSSGTGIWESALSNTLCRGDKVLTARYGQFSHLWVDMAQRLGLDVIVQEEEWGAG EEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCC ADPQKIEEALRADKDHAIKAVMVVHNETATGVTSDIGAVRKAIDAAGHPALLFVDGISSI CCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHH GSLPFKMDEWGVDCAIAGSQKGFMLPAGLGLICISPKALKIAEGGTGRNDRLGHAYFAWK CCCCCEECCCCCCEEEECCCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCCEEEHHH DQLAANATGYFPYTPVLPLLYGLREALAIVKEEGLENVYHRHHVLAEATRQAVAAWGLKP HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC CAKEPKWNSDTVTAIVVPEGADAAKVITHAYERYNLSLGAGLSKVAGKVFRIGHLGDLNE CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHEEECCCCCCHH LSLLGAIAGAEMAMLDCGIKVTPGSGVAAASSYLRENPLHKA HHHHHHHHCCCEEEEECCCEECCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]