| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yhjX [H]
Identifier: 170749977
GI number: 170749977
Start: 3799376
End: 3801037
Strand: Reverse
Name: yhjX [H]
Synonym: Mrad2831_3578
Alternate gene names: 170749977
Gene position: 3801037-3799376 (Counterclockwise)
Preceding gene: 170749978
Following gene: 170749976
Centisome position: 62.54
GC content: 70.58
Gene sequence:
>1662_bases ATGAGTGCTGGAGTGGCAGGCGCGATCGCGCCTGAGGGAACGCCGAGTCTGCTGTCGCGCGAGCGGATCGTCGCCAAGCC GGGCTTCAATCGCTGGCTGGTGCCGCCGGCGGCCCTGGCGATTCATCTCTGCATCGGGATGGCCTACGGTCTGTCGGTGT TCTGGCTGCCGCTGACCCGGGCGCTCTCCGTGGGCAAGCCGGCGCCCGCCGCCTGCCCCGACATGGGCGTGATGACGGCC CTGTTCACCACCACCTGCGATTGGCGCGTCAGCGACCTCGTCACGGTCTTCTCCATTGGCATCGTCGTGCTCGGCCTCTC GGCCGCGCTGTTCGGCGGCTGGCTGGAGCGGGCGGGCCCGCGCAAGGCCGGCATCGCGGCGGCCCTCTGCTGGGGCGGCG GCTTCCTGATCGGCGCCTTCGGCGTCTACATCCACCAGCTCTGGATCGTCTGGCTCGGCATGGGCCTGATCGGCGGCGTC GGGCTGGGCCTCGGCTACATCTCGCCGGTCTCGACGCTGATCAAGTGGTTCCCGGATCGCCGCGGCATGGCAACCGGCAT GGCGATCATGGGCTTCGGCGGCGGCGCGATGATCGGCTCGCCCCTGGCCGACAGCCTGATCAAGGGCTTCCGGACCGCGG ATTCGGCCGGCGTCTGGCAGACGCTGGCGGTGATGGGAGTCGGGTACATCCTGTTCATGCTGGGCGGCGCGTTCGGCTAC CGGGTGCCGCCGGCCGGCTGGCGGCCGGACGGCTGGACCAGCCCGACTGCCAAGAACGCCATGATCGCCTCGGGGCACGT CCACCTGCGCGACGCCCACAAGACCTTCCAGTTCTGGATGATCTGGCTCGTCCTGTTCCTCAACGTGTCGGCCGGCATCG GCGTGCTGGCCCTGGCCTCGCCGATGCTCCAAGAGATCTTCGGCGGCGAGCTGATCGGCCTGCCCGGCACCGGCTTCTCG GCCCTCGACGCCGGCCAGAAGGCGCAGGTCGCGGCCATCGCGGCCGGCTTCGTCGGCCTGCTGTCCCTGTTCAACATCCT GGGCCGGTTCTTCTGGGCCTCGATGTCGGACCGGATCGGGCGGAAGGGCACCTACGCGATCTTCTTCGCGCTGGGCGGCC TCCTGTACGCGGCGGCGCCCTGGGCCGCCGGCATCGGCTCGCAGGCGCTGTTCGTCGCGATCTTCTGCGTGATCCTGTCC ATGTACGGCGGCGGTTTCGCGACGGTGCCGGCCTACCTCGCCGACGTGTTCGGCACGCAGTTCGTGGGCGCGATCCACGG GCGCCTGCTCACCGCGTGGTCGATGGCCGGCATCGTCGGGCCCTTCGTCATCACCAAGATCCGCGAGGCGCAGGTCGCCG CGGGCGTGCAGGGGGCCGATCTCTACGGCCGGACCATGTACGTGCTGGCGAGCTTCCTGGCGGTCGGCTTCCTCTGCAAC CTGCTGGTCCGGCCGCTGGCGCAGCGCTGGTTCATGTCCGATTCCGAGCGGGCTTCCCTGGACGTCCGCGCGGGCGCCAC GGCCTCGGGACCGTCCGGCTCCTTCGGCATCGGCCGCGGCGGGTTCAGCGCCGGGGCCGCCCTGGCCTGGGCGGTGGTCG GCATCCCGATCGTCTGGGGCATCGGCATCACCCTGTCGAAGGCGTTCATCCTGTTCCGCTGA
Upstream 100 bases:
>100_bases ACGCCGGCTCAGCGTGTCGCGCGCTGGCACCCTGCACACAGATCGCGCATGGTCGCCCGCCGAGCGGCCCGCCAACGAGG CCGCGGCGGAGGAGTCCATC
Downstream 100 bases:
>100_bases GCGGGCGCGCTCGGTTGTGGCGGGCACGGCGGGTCGCTAGGTTTCCGGCGCCTCGCCGTGCCGGGATGCCGTCGTCGTGA TCGACAAGCTGGACTTCCTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MSAGVAGAIAPEGTPSLLSRERIVAKPGFNRWLVPPAALAIHLCIGMAYGLSVFWLPLTRALSVGKPAPAACPDMGVMTA LFTTTCDWRVSDLVTVFSIGIVVLGLSAALFGGWLERAGPRKAGIAAALCWGGGFLIGAFGVYIHQLWIVWLGMGLIGGV GLGLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGSPLADSLIKGFRTADSAGVWQTLAVMGVGYILFMLGGAFGY RVPPAGWRPDGWTSPTAKNAMIASGHVHLRDAHKTFQFWMIWLVLFLNVSAGIGVLALASPMLQEIFGGELIGLPGTGFS ALDAGQKAQVAAIAAGFVGLLSLFNILGRFFWASMSDRIGRKGTYAIFFALGGLLYAAAPWAAGIGSQALFVAIFCVILS MYGGGFATVPAYLADVFGTQFVGAIHGRLLTAWSMAGIVGPFVITKIREAQVAAGVQGADLYGRTMYVLASFLAVGFLCN LLVRPLAQRWFMSDSERASLDVRAGATASGPSGSFGIGRGGFSAGAALAWAVVGIPIVWGIGITLSKAFILFR
Sequences:
>Translated_553_residues MSAGVAGAIAPEGTPSLLSRERIVAKPGFNRWLVPPAALAIHLCIGMAYGLSVFWLPLTRALSVGKPAPAACPDMGVMTA LFTTTCDWRVSDLVTVFSIGIVVLGLSAALFGGWLERAGPRKAGIAAALCWGGGFLIGAFGVYIHQLWIVWLGMGLIGGV GLGLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGSPLADSLIKGFRTADSAGVWQTLAVMGVGYILFMLGGAFGY RVPPAGWRPDGWTSPTAKNAMIASGHVHLRDAHKTFQFWMIWLVLFLNVSAGIGVLALASPMLQEIFGGELIGLPGTGFS ALDAGQKAQVAAIAAGFVGLLSLFNILGRFFWASMSDRIGRKGTYAIFFALGGLLYAAAPWAAGIGSQALFVAIFCVILS MYGGGFATVPAYLADVFGTQFVGAIHGRLLTAWSMAGIVGPFVITKIREAQVAAGVQGADLYGRTMYVLASFLAVGFLCN LLVRPLAQRWFMSDSERASLDVRAGATASGPSGSFGIGRGGFSAGAALAWAVVGIPIVWGIGITLSKAFILFR >Mature_552_residues SAGVAGAIAPEGTPSLLSRERIVAKPGFNRWLVPPAALAIHLCIGMAYGLSVFWLPLTRALSVGKPAPAACPDMGVMTAL FTTTCDWRVSDLVTVFSIGIVVLGLSAALFGGWLERAGPRKAGIAAALCWGGGFLIGAFGVYIHQLWIVWLGMGLIGGVG LGLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGSPLADSLIKGFRTADSAGVWQTLAVMGVGYILFMLGGAFGYR VPPAGWRPDGWTSPTAKNAMIASGHVHLRDAHKTFQFWMIWLVLFLNVSAGIGVLALASPMLQEIFGGELIGLPGTGFSA LDAGQKAQVAAIAAGFVGLLSLFNILGRFFWASMSDRIGRKGTYAIFFALGGLLYAAAPWAAGIGSQALFVAIFCVILSM YGGGFATVPAYLADVFGTQFVGAIHGRLLTAWSMAGIVGPFVITKIREAQVAAGVQGADLYGRTMYVLASFLAVGFLCNL LVRPLAQRWFMSDSERASLDVRAGATASGPSGSFGIGRGGFSAGAALAWAVVGIPIVWGIGITLSKAFILFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=351, Percent_Identity=24.2165242165242, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115532490, Length=355, Percent_Identity=26.7605633802817, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115532488, Length=355, Percent_Identity=26.7605633802817, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 57681; Mature: 57550
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGVAGAIAPEGTPSLLSRERIVAKPGFNRWLVPPAALAIHLCIGMAYGLSVFWLPLTR CCCCCCCCCCCCCCHHHHHCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALSVGKPAPAACPDMGVMTALFTTTCDWRVSDLVTVFSIGIVVLGLSAALFGGWLERAGP HHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RKAGIAAALCWGGGFLIGAFGVYIHQLWIVWLGMGLIGGVGLGLGYISPVSTLIKWFPDR CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RGMATGMAIMGFGGGAMIGSPLADSLIKGFRTADSAGVWQTLAVMGVGYILFMLGGAFGY CCCHHCEEEEECCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC RVPPAGWRPDGWTSPTAKNAMIASGHVHLRDAHKTFQFWMIWLVLFLNVSAGIGVLALAS CCCCCCCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH PMLQEIFGGELIGLPGTGFSALDAGQKAQVAAIAAGFVGLLSLFNILGRFFWASMSDRIG HHHHHHHCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RKGTYAIFFALGGLLYAAAPWAAGIGSQALFVAIFCVILSMYGGGFATVPAYLADVFGTQ CCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FVGAIHGRLLTAWSMAGIVGPFVITKIREAQVAAGVQGADLYGRTMYVLASFLAVGFLCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LLVRPLAQRWFMSDSERASLDVRAGATASGPSGSFGIGRGGFSAGAALAWAVVGIPIVWG HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH IGITLSKAFILFR HHHHHHHHHHCCC >Mature Secondary Structure SAGVAGAIAPEGTPSLLSRERIVAKPGFNRWLVPPAALAIHLCIGMAYGLSVFWLPLTR CCCCCCCCCCCCCHHHHHCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALSVGKPAPAACPDMGVMTALFTTTCDWRVSDLVTVFSIGIVVLGLSAALFGGWLERAGP HHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RKAGIAAALCWGGGFLIGAFGVYIHQLWIVWLGMGLIGGVGLGLGYISPVSTLIKWFPDR CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RGMATGMAIMGFGGGAMIGSPLADSLIKGFRTADSAGVWQTLAVMGVGYILFMLGGAFGY CCCHHCEEEEECCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC RVPPAGWRPDGWTSPTAKNAMIASGHVHLRDAHKTFQFWMIWLVLFLNVSAGIGVLALAS CCCCCCCCCCCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH PMLQEIFGGELIGLPGTGFSALDAGQKAQVAAIAAGFVGLLSLFNILGRFFWASMSDRIG HHHHHHHCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RKGTYAIFFALGGLLYAAAPWAAGIGSQALFVAIFCVILSMYGGGFATVPAYLADVFGTQ CCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FVGAIHGRLLTAWSMAGIVGPFVITKIREAQVAAGVQGADLYGRTMYVLASFLAVGFLCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LLVRPLAQRWFMSDSERASLDVRAGATASGPSGSFGIGRGGFSAGAALAWAVVGIPIVWG HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH IGITLSKAFILFR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]