| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749913
Identifier: 170749913
GI number: 170749913
Start: 3728628
End: 3729110
Strand: Direct
Name: 170749913
Synonym: Mrad2831_3513
Alternate gene names: NA
Gene position: 3728628-3729110 (Clockwise)
Preceding gene: 170749912
Following gene: 170749914
Centisome position: 61.35
GC content: 66.87
Gene sequence:
>483_bases ATGGCGGAGAAGCAGCGCGGGCCGAACCGCCTCGCGAAGGTGAGCCTGGACGAGGCGTCCATCGCCCGCGGCAATCCGGA TCAGGAGCACGAGCGGGCGATCGCGCTGTTCGACATCCTGGAGGACAATTCCTTCACGATCCCCGGTCGGGAGGGGCCCT ACGCGCTGACGCTCGGCCTCGTCGAGAACAAGCTGTCCTTCGCCATCGCCACGGTGGACGGTGAGCCGGTGATGACGCAC CTCCTGTCGCTGACGCCGTTCCGGCGGGTGATCCGCGACTACGAGATGATCTGCGAGAGCTACTACAACGCGATCCGCAC CGCCTCGCCGTCGCAGATCGAGGCGATCGACATGGGTCGGCGCGGACTGCACAACGAGGCGTCCGAGACGCTCAAGCAGC GGCTCGAGGGGAAGGTGGACCTCGACCACGACACGGCGCGCCGCCTGTTCACCCTGATCTTCGCGCTGCACTGGAAGGGC TAG
Upstream 100 bases:
>100_bases CGGGCGCTCGGCCCGGCGGCGATAAACCTCGGCCGGTCCGAGGGCCTGGAGGGGCATGCCCGCTCCGTCGCGATCCGGTT GAACCTGTGAGGTTTTGGGG
Downstream 100 bases:
>100_bases GCGCCCTCCGCGCCGACCGGCGATGGCTGAGCCCGCTCCCGAGCCTCCTCCCGACGCTTCCCCGAAGAAGCGGCGGGTGC AGTCCGTCCTGTTCATGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAEKQRGPNRLAKVSLDEASIARGNPDQEHERAIALFDILEDNSFTIPGREGPYALTLGLVENKLSFAIATVDGEPVMTH LLSLTPFRRVIRDYEMICESYYNAIRTASPSQIEAIDMGRRGLHNEASETLKQRLEGKVDLDHDTARRLFTLIFALHWKG
Sequences:
>Translated_160_residues MAEKQRGPNRLAKVSLDEASIARGNPDQEHERAIALFDILEDNSFTIPGREGPYALTLGLVENKLSFAIATVDGEPVMTH LLSLTPFRRVIRDYEMICESYYNAIRTASPSQIEAIDMGRRGLHNEASETLKQRLEGKVDLDHDTARRLFTLIFALHWKG >Mature_159_residues AEKQRGPNRLAKVSLDEASIARGNPDQEHERAIALFDILEDNSFTIPGREGPYALTLGLVENKLSFAIATVDGEPVMTHL LSLTPFRRVIRDYEMICESYYNAIRTASPSQIEAIDMGRRGLHNEASETLKQRLEGKVDLDHDTARRLFTLIFALHWKG
Specific function: Unknown
COG id: COG5328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0262 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3513_METRJ (B1LUQ4)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001756173.1 - GeneID: 6139566 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_3513 - HOGENOM: HBG294171 - OMA: IDMARRG - ProtClustDB: PRK02853 - HAMAP: MF_00678 - InterPro: IPR008321 - PIRSF: PIRSF032146
Pfam domain/function: PF06793 UPF0262
EC number: NA
Molecular weight: Translated: 18052; Mature: 17921
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKQRGPNRLAKVSLDEASIARGNPDQEHERAIALFDILEDNSFTIPGREGPYALTLGL CCCCCCCCCHHHEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEE VENKLSFAIATVDGEPVMTHLLSLTPFRRVIRDYEMICESYYNAIRTASPSQIEAIDMGR HHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC RGLHNEASETLKQRLEGKVDLDHDTARRLFTLIFALHWKG CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEKQRGPNRLAKVSLDEASIARGNPDQEHERAIALFDILEDNSFTIPGREGPYALTLGL CCCCCCCCHHHEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEE VENKLSFAIATVDGEPVMTHLLSLTPFRRVIRDYEMICESYYNAIRTASPSQIEAIDMGR HHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC RGLHNEASETLKQRLEGKVDLDHDTARRLFTLIFALHWKG CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA