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The map label for this gene is rnpA [H]

Identifier: 170749904

GI number: 170749904

Start: 3720090

End: 3720710

Strand: Reverse

Name: rnpA [H]

Synonym: Mrad2831_3504

Alternate gene names: 170749904

Gene position: 3720710-3720090 (Counterclockwise)

Preceding gene: 170749905

Following gene: 170749903

Centisome position: 61.22

GC content: 73.43

Gene sequence:

>621_bases
ATGGCGACGATCGAGCGGCTCAAGAAACGACCCGACTTCCTGGCGGCGGCCGAGGGACGTCGCTTCCACACCGAGCGGAT
GACCGCGCAGGGGCGTCTTCGGAACCCGGACGCTTGTCCCGGCCTCCGTCTCGGGTTCACCATCACCAAGCGTGTCGGTC
ACGCGACGGAGCGCAACCGCATCCGGCGCCGCCTCCGCGCGGCCCTGAGCGTGGTCGCGTCCGATCTGCCGGGCGAGCTC
GCGGGCCTTCCGGCCGACATCGTGCTGATCGCCCGCCGTCCCGCCCTGGAAGCCGCCTTCGAGACCCTCACCGAGGATCT
GCGTCGCGCGATTCCCGCGGTGACCCGCCCGGCGGCGGCCCGCGGGGACAGGCCCTCCGGCCGGTCCGGTGGCCGGCGCT
CCGGGCCGACCCCCGACAAGACCCTATCTCAGACGTCCTCTCTCCCGCACGAAGCCGGCCGCGCCTCCGCGCAGGCGGCC
CCGACCGGCGGAGCCGACATCGGCCCGTCGCAGGGGTGCGACAGAGATCCCCGAATCACAGGCGCGCGCAGGTCCTCCGG
GGCCGGCGACGCTCCTGTTGCCACTCCGAACGCGTGCGGCGGTGTCCCTGATGGGCAATGA

Upstream 100 bases:

>100_bases
CCGCAAGCGCCTGTCGGCCTGAGGCCTGATCCTCGCCGGCGCGGACGCCCCGGGCATCCGCGCCACGAGGCAAGTGGTAT
CGGCCGGGATCGAACCATCG

Downstream 100 bases:

>100_bases
CAAGACGAACATGTTCGTGGCCATCGGCCTGTCGCTGCTGGTGCTGCTCGGGTGGCAGTACTTCGTGGCCGGCCCGCGCA
TGGAGCAGCAGCGCCAGATC

Product: ribonuclease P protein

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5 [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNRIRRRLRAALSVVASDLPGEL
AGLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRPAAARGDRPSGRSGGRRSGPTPDKTLSQTSSLPHEAGRASAQAA
PTGGADIGPSQGCDRDPRITGARRSSGAGDAPVATPNACGGVPDGQ

Sequences:

>Translated_206_residues
MATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNRIRRRLRAALSVVASDLPGEL
AGLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRPAAARGDRPSGRSGGRRSGPTPDKTLSQTSSLPHEAGRASAQAA
PTGGADIGPSQGCDRDPRITGARRSSGAGDAPVATPNACGGVPDGQ
>Mature_205_residues
ATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNRIRRRLRAALSVVASDLPGELA
GLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRPAAARGDRPSGRSGGRRSGPTPDKTLSQTSSLPHEAGRASAQAAP
TGGADIGPSQGCDRDPRITGARRSSGAGDAPVATPNACGGVPDGQ

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- InterPro:   IPR020539
- ProDom:   PD003629 [H]

Pfam domain/function: PF00825 Ribonuclease_P [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 21621; Mature: 21489

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNR
CCHHHHHHCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHH
IRRRLRAALSVVASDLPGELAGLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRPAAA
HHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH
RGDRPSGRSGGRRSGPTPDKTLSQTSSLPHEAGRASAQAAPTGGADIGPSQGCDRDPRIT
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GARRSSGAGDAPVATPNACGGVPDGQ
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATIERLKKRPDFLAAAEGRRFHTERMTAQGRLRNPDACPGLRLGFTITKRVGHATERNR
CHHHHHHCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHH
IRRRLRAALSVVASDLPGELAGLPADIVLIARRPALEAAFETLTEDLRRAIPAVTRPAAA
HHHHHHHHHHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHH
RGDRPSGRSGGRRSGPTPDKTLSQTSSLPHEAGRASAQAAPTGGADIGPSQGCDRDPRIT
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GARRSSGAGDAPVATPNACGGVPDGQ
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA