| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749763
Identifier: 170749763
GI number: 170749763
Start: 3569131
End: 3570129
Strand: Reverse
Name: 170749763
Synonym: Mrad2831_3362
Alternate gene names: NA
Gene position: 3570129-3569131 (Counterclockwise)
Preceding gene: 170749769
Following gene: 170749761
Centisome position: 58.74
GC content: 76.58
Gene sequence:
>999_bases ATGGAATTCTATTCTCCAGCCTGCCCGGCCACGGCCGGCGCTGCCGGACCGTCCCGCGCAATCGGCAGGCGGGGCCTGCC CCTTCGGCCGACTCGTCGGGCCGCTCTGCTGGCGGGCCTCGGCCTGATCCTGGCGCCGCCGGCGCGCGCCGCCGAGGCGC TCCGCCTCGTGCTCGCCACCGCGACGCCCGGCGGCGGCTTCCCGGCCTTCGGGGAGACCTTCGCCGGCGCGATCGCGGCC GCGGACCCGGCCCTGACCGTCGAGCGGCGTGCCACCGGCGGCTCGTCCGAGAATGTCGGCCTCCTCCGCGCCGGCCGCGT CGATCTCGGCCTCGTGCAGGGGGAGTACGCCTATCCCGCCCTCGCCGAGGGCGGCGGCCTGACCGTTCTGGCGCCGATGT ACCCGACGCCGGGCCTGTTCGTGGTGCCGGCCGGCAGCGCGATCCGCTCGGTGGCGGATCTGCGCGGGCGCAGGGTCGTC CTCGGCACGCACAAGTCCGGGCTCACCGTCATGGGCCGGAGCGCCCTCGGCGCCTCCGGGCTCGATCCCGAGCGCGACAT CAGCCCGATCCTGCTCGACCGGGCCGGCGACGGTCCGACACTGGTGCGGGAGGGCCGCGCCGACGCGCTCTGGGGCGGCG GCCTCGACTGGCCGGGCTTCCGCGCCCTGGCCTCGGATCCCGGCGGAGCCCGCTTCTTCGGACCGTCCGAGGCGGGCATT GCGCGCCTCGCGCAGCCCGGCGCGGCGACGCGGCGTCTCACGGTTCCGGCCGGCAGCTTCGCCGGGCAGGCGGAGCCGAT CGAGACGGTCGGATCCTGGAGCTTCGTGCTCGCGAGGCCCGGCCTCGACGAGGAGACGGCCTACCGCGTCGTGAGTGCGC TGGCGCGGACCGATCTCACCACCGCCCGGCCGAGGAACCTCGTCGGCCTCGTCCCGGCGGATCGGGTCAATCCCGGGACC GCCCGCTTCCTCCGCGAGGCCGGCGTGACGCTGCGCTGA
Upstream 100 bases:
>100_bases CCGGAGCAATCGGGCTAAGTGCCGTTACCGAAAGTTCTTTCCAGAATTGGGCGAACTTTCGGAGCGGGGTGGAAGACCTT TATTGAGCGGCCCTTTCCTT
Downstream 100 bases:
>100_bases CCGCGCGGCGGCTCAGCGGAAGGAGGCGACGCGGCGATCGCGCTTCCGCTCGGCGGCGGGCTGGTAGGCGATCTCGGCGT GGTGGGTGCAGTACGGCAGG
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: Secreted Protein; TRAP Transporter Solute Receptor TAXI Family; Immunogenic Protein; TRAP Transporter Solute Receptor; Immunogenic-Related Protein; TAXI Family TRAP Transporter Solute Receptor; TRAP-Type Transport System Periplasmic Component; TRAP Transporter Periplasmic Component; Trap Transporter Solute Receptor Taxi Family
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MEFYSPACPATAGAAGPSRAIGRRGLPLRPTRRAALLAGLGLILAPPARAAEALRLVLATATPGGGFPAFGETFAGAIAA ADPALTVERRATGGSSENVGLLRAGRVDLGLVQGEYAYPALAEGGGLTVLAPMYPTPGLFVVPAGSAIRSVADLRGRRVV LGTHKSGLTVMGRSALGASGLDPERDISPILLDRAGDGPTLVREGRADALWGGGLDWPGFRALASDPGGARFFGPSEAGI ARLAQPGAATRRLTVPAGSFAGQAEPIETVGSWSFVLARPGLDEETAYRVVSALARTDLTTARPRNLVGLVPADRVNPGT ARFLREAGVTLR
Sequences:
>Translated_332_residues MEFYSPACPATAGAAGPSRAIGRRGLPLRPTRRAALLAGLGLILAPPARAAEALRLVLATATPGGGFPAFGETFAGAIAA ADPALTVERRATGGSSENVGLLRAGRVDLGLVQGEYAYPALAEGGGLTVLAPMYPTPGLFVVPAGSAIRSVADLRGRRVV LGTHKSGLTVMGRSALGASGLDPERDISPILLDRAGDGPTLVREGRADALWGGGLDWPGFRALASDPGGARFFGPSEAGI ARLAQPGAATRRLTVPAGSFAGQAEPIETVGSWSFVLARPGLDEETAYRVVSALARTDLTTARPRNLVGLVPADRVNPGT ARFLREAGVTLR >Mature_332_residues MEFYSPACPATAGAAGPSRAIGRRGLPLRPTRRAALLAGLGLILAPPARAAEALRLVLATATPGGGFPAFGETFAGAIAA ADPALTVERRATGGSSENVGLLRAGRVDLGLVQGEYAYPALAEGGGLTVLAPMYPTPGLFVVPAGSAIRSVADLRGRRVV LGTHKSGLTVMGRSALGASGLDPERDISPILLDRAGDGPTLVREGRADALWGGGLDWPGFRALASDPGGARFFGPSEAGI ARLAQPGAATRRLTVPAGSFAGQAEPIETVGSWSFVLARPGLDEETAYRVVSALARTDLTTARPRNLVGLVPADRVNPGT ARFLREAGVTLR
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33910; Mature: 33910
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYSPACPATAGAAGPSRAIGRRGLPLRPTRRAALLAGLGLILAPPARAAEALRLVLAT CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCHHEECCCHHHHHHHEEEEEE ATPGGGFPAFGETFAGAIAAADPALTVERRATGGSSENVGLLRAGRVDLGLVQGEYAYPA CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCE LAEGGGLTVLAPMYPTPGLFVVPAGSAIRSVADLRGRRVVLGTHKSGLTVMGRSALGASG EECCCCEEEEECCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCEEEECHHCCCCC LDPERDISPILLDRAGDGPTLVREGRADALWGGGLDWPGFRALASDPGGARFFGPSEAGI CCCCCCCCCEEEECCCCCCCEEECCCCCEEECCCCCCCCCHHHHCCCCCCEECCCCHHHH ARLAQPGAATRRLTVPAGSFAGQAEPIETVGSWSFVLARPGLDEETAYRVVSALARTDLT HHHCCCCCCCEEEECCCCCCCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCC TARPRNLVGLVPADRVNPGTARFLREAGVTLR CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MEFYSPACPATAGAAGPSRAIGRRGLPLRPTRRAALLAGLGLILAPPARAAEALRLVLAT CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCHHEECCCHHHHHHHEEEEEE ATPGGGFPAFGETFAGAIAAADPALTVERRATGGSSENVGLLRAGRVDLGLVQGEYAYPA CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCE LAEGGGLTVLAPMYPTPGLFVVPAGSAIRSVADLRGRRVVLGTHKSGLTVMGRSALGASG EECCCCEEEEECCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCEEEECHHCCCCC LDPERDISPILLDRAGDGPTLVREGRADALWGGGLDWPGFRALASDPGGARFFGPSEAGI CCCCCCCCCEEEECCCCCCCEEECCCCCEEECCCCCCCCCHHHHCCCCCCEECCCCHHHH ARLAQPGAATRRLTVPAGSFAGQAEPIETVGSWSFVLARPGLDEETAYRVVSALARTDLT HHHCCCCCCCEEEECCCCCCCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCC TARPRNLVGLVPADRVNPGTARFLREAGVTLR CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA