| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749761
Identifier: 170749761
GI number: 170749761
Start: 3566938
End: 3568125
Strand: Reverse
Name: 170749761
Synonym: Mrad2831_3360
Alternate gene names: NA
Gene position: 3568125-3566938 (Counterclockwise)
Preceding gene: 170749763
Following gene: 170749757
Centisome position: 58.71
GC content: 70.71
Gene sequence:
>1188_bases ATGGGTTCTCGTCAGGTCAGCCTGCGCATGGCGGTGGCGTTCGGGCTGGCGGCGCAGGTCGCGGCCTGCGGCAGCGTTCC GCGGACTCCCTACAGCGCCGAGCAGGCGGCGTTCGCCACCGTGCCGGGCATTCCCGGCGCGCGCGTCTTCGCGGACGCGT CGGTGGACACGATCGCGGCCCTCGCCGCCAATCCGGAGCGGCGCCTCAAGGGCTTCACCTACCTGGCCCTGTCGGGCGGC GGCGGCGACGGCGCTTACGGGGCGGGCGTGCTCAACGGCTGGACGGCGTCCGGCAAGCGGCCGGAATTCACCCTGGTCTC CGGCGTCTCGACGGGGGCGCTGATCGCGCCCTTCGCGTTCCTGGGCTCGGCCTACGATCCTTACCTCACCGAGTTCTACA CGAGCGGCGTCGCCGGCGAGCTCGTGGCCTCGCCGAATCTGGCCAACGTGCTGTTCGGCTCCGGCCTGTTCGGCGACGGG CGCCTGCGCAACCTCATCGACCGCTACGTCACGGACGATCTCCTCAAGGCCGTGGCCGAGGAGCACGCCAAGGGCCGGCG CCTGCTCGTCGTGACGACGAACCTGGATTCCCAGCGCGCGGTGATCTGGAACATGGGCGCCATCGCGGCGAGCGGGGTGC CCAATGCCCGCCAGCTGTTCCGCGACGTCCTGGCGGCCTCGGCCAGCATCCCGGCGGTGTTCCCGCCCCAGTTCATCGAC GTCTCGGCGGGCGACGCGCGCTTCCAGGAGATGCACGTCGACGGCTCGGTGGTGACACCGGTCTTCACCCTGCCGCAGAC GCTCCTGCTGCGCGACGGACGGATCCGCACCGGCGGCAAGGCCGAGATCTACGTGGTGATCAACGGCCGCCTGGAGCCGG ACTTCGAGGTCACGAAGGACAACACGCTCTCGATCGTGGAGCGCTCCTTCACGACGGCGAGCCGCGCCCGCTCCCGCGCG ACGCTGACGGCGACCTACGCGCTGGCGCGCACCAACGGCATCGGCTTCAATCTCACCTACATCGACGAGAACGGACCCAA GGCCTCCGCCGCGAAGGGCTTCGACACCGCCTACATGCGCGCCCTGTACGAGGCCGGCTACGAGAAGGGCCGGACAGGCG CCTTCTGGCAGCACTCGATCCCCGCCGCGCCGGTGCTGAAGGAGACGGTGAGCGCCGTGGCCAACTGA
Upstream 100 bases:
>100_bases CTTATCGTTCCGTCGAAGCCGGCTAAGACGGAACAGGCGATACGGCCAAGCTCGTTCCGTGTGGCAGAGTGGGCGTGTTT CGCGGTTCGAGGAAGTGACG
Downstream 100 bases:
>100_bases TCGCCCGACCGTTCCGCCGCGCGCCCGACACGGGTGCGCGGCGAACGGCGCGGCTACTTGCCCAGGATCTTCGTCACGAG GCGGCCGAGGGGCGTCGCCG
Product: patatin
Products: NA
Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MGSRQVSLRMAVAFGLAAQVAACGSVPRTPYSAEQAAFATVPGIPGARVFADASVDTIAALAANPERRLKGFTYLALSGG GGDGAYGAGVLNGWTASGKRPEFTLVSGVSTGALIAPFAFLGSAYDPYLTEFYTSGVAGELVASPNLANVLFGSGLFGDG RLRNLIDRYVTDDLLKAVAEEHAKGRRLLVVTTNLDSQRAVIWNMGAIAASGVPNARQLFRDVLAASASIPAVFPPQFID VSAGDARFQEMHVDGSVVTPVFTLPQTLLLRDGRIRTGGKAEIYVVINGRLEPDFEVTKDNTLSIVERSFTTASRARSRA TLTATYALARTNGIGFNLTYIDENGPKASAAKGFDTAYMRALYEAGYEKGRTGAFWQHSIPAAPVLKETVSAVAN
Sequences:
>Translated_395_residues MGSRQVSLRMAVAFGLAAQVAACGSVPRTPYSAEQAAFATVPGIPGARVFADASVDTIAALAANPERRLKGFTYLALSGG GGDGAYGAGVLNGWTASGKRPEFTLVSGVSTGALIAPFAFLGSAYDPYLTEFYTSGVAGELVASPNLANVLFGSGLFGDG RLRNLIDRYVTDDLLKAVAEEHAKGRRLLVVTTNLDSQRAVIWNMGAIAASGVPNARQLFRDVLAASASIPAVFPPQFID VSAGDARFQEMHVDGSVVTPVFTLPQTLLLRDGRIRTGGKAEIYVVINGRLEPDFEVTKDNTLSIVERSFTTASRARSRA TLTATYALARTNGIGFNLTYIDENGPKASAAKGFDTAYMRALYEAGYEKGRTGAFWQHSIPAAPVLKETVSAVAN >Mature_394_residues GSRQVSLRMAVAFGLAAQVAACGSVPRTPYSAEQAAFATVPGIPGARVFADASVDTIAALAANPERRLKGFTYLALSGGG GDGAYGAGVLNGWTASGKRPEFTLVSGVSTGALIAPFAFLGSAYDPYLTEFYTSGVAGELVASPNLANVLFGSGLFGDGR LRNLIDRYVTDDLLKAVAEEHAKGRRLLVVTTNLDSQRAVIWNMGAIAASGVPNARQLFRDVLAASASIPAVFPPQFIDV SAGDARFQEMHVDGSVVTPVFTLPQTLLLRDGRIRTGGKAEIYVVINGRLEPDFEVTKDNTLSIVERSFTTASRARSRAT LTATYALARTNGIGFNLTYIDENGPKASAAKGFDTAYMRALYEAGYEKGRTGAFWQHSIPAAPVLKETVSAVAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41616; Mature: 41484
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRQVSLRMAVAFGLAAQVAACGSVPRTPYSAEQAAFATVPGIPGARVFADASVDTIAA CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCHHHHHH LAANPERRLKGFTYLALSGGGGDGAYGAGVLNGWTASGKRPEFTLVSGVSTGALIAPFAF HHCCHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH LGSAYDPYLTEFYTSGVAGELVASPNLANVLFGSGLFGDGRLRNLIDRYVTDDLLKAVAE HCCCCCHHHHHHHHCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EHAKGRRLLVVTTNLDSQRAVIWNMGAIAASGVPNARQLFRDVLAASASIPAVFPPQFID HHCCCCEEEEEEECCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE VSAGDARFQEMHVDGSVVTPVFTLPQTLLLRDGRIRTGGKAEIYVVINGRLEPDFEVTKD CCCCCCCHHEEECCCCEECHHHHCCHHHHHCCCEECCCCCEEEEEEEECCCCCCCEECCC NTLSIVERSFTTASRARSRATLTATYALARTNGIGFNLTYIDENGPKASAAKGFDTAYMR CHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHH ALYEAGYEKGRTGAFWQHSIPAAPVLKETVSAVAN HHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GSRQVSLRMAVAFGLAAQVAACGSVPRTPYSAEQAAFATVPGIPGARVFADASVDTIAA CCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCHHHHHH LAANPERRLKGFTYLALSGGGGDGAYGAGVLNGWTASGKRPEFTLVSGVSTGALIAPFAF HHCCHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHH LGSAYDPYLTEFYTSGVAGELVASPNLANVLFGSGLFGDGRLRNLIDRYVTDDLLKAVAE HCCCCCHHHHHHHHCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EHAKGRRLLVVTTNLDSQRAVIWNMGAIAASGVPNARQLFRDVLAASASIPAVFPPQFID HHCCCCEEEEEEECCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEE VSAGDARFQEMHVDGSVVTPVFTLPQTLLLRDGRIRTGGKAEIYVVINGRLEPDFEVTKD CCCCCCCHHEEECCCCEECHHHHCCHHHHHCCCEECCCCCEEEEEEEECCCCCCCEECCC NTLSIVERSFTTASRARSRATLTATYALARTNGIGFNLTYIDENGPKASAAKGFDTAYMR CHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHH ALYEAGYEKGRTGAFWQHSIPAAPVLKETVSAVAN HHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA