| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yxeN [H]
Identifier: 170749710
GI number: 170749710
Start: 3510438
End: 3511187
Strand: Reverse
Name: yxeN [H]
Synonym: Mrad2831_3309
Alternate gene names: 170749710
Gene position: 3511187-3510438 (Counterclockwise)
Preceding gene: 170749711
Following gene: 170749709
Centisome position: 57.77
GC content: 66.53
Gene sequence:
>750_bases ATGATCGCCACGATCCAGGCGTGGTTCCAGCAGCTCTACGAGACCACGGGCTTCAACTTCACGGTCTTCTACGATCCCTA CGACTGGGACCGGTACGTGGCCGGCCTGCGGATGACGCTGCTCCTCGGGATCAGCACCATCCTGGCCAGCCTCGTCATCG GCGCCGTGGGCGCGCTCCTGCAGAGCGGGCCGTCGCGTGTCCTGCGGGCGCTGGTCAACGGCTTCGTGGTGGTGTTCCGC AACACGCCGCCGCTCGTGCAGATCTTCTTCTTCTACTTCGGCCTCGGGACGCTGCTCCCGGACATCCGCTCGGCCGACGG CCTGCGGGCGCCGATCCTCAACAATGTCCAGTGGGCGATCATCTCGCTGTCGCTGTTCGCGGGCGCGTTCAACGTCGAGA TCTTCCGCTCGGGCATCGAGGCCGTGCCGCGGACCACGGTCGAGGCCGCCGAGGCCCTGGGCTACACCCGCTTCAAGGCC TACCGGTACGTCGTCCTGCCGCTGGCCCTGCGCGTCTGCCTGCCGGCCCTGAACAACAACCTGATCAACCTCCTGAAGAC CACGACACTGGCCTACGCCATCGCGGTCCCGGAGACCCTGTACGCGGTCAAGCAGATCTGGTCCGAGTCGCAGAACGTGC TGGAGATGATGCTGGTGCTGCTGGCGACTTACGCGGTCCTCGTCGGCGTGCTCGTCTGGATCATGCACCGCTGGGAGCGC GCCCTGCGCATCCCGGGATACGGCCGATGA
Upstream 100 bases:
>100_bases GGCATCGAGCCGACCGCTTACTCGAAGGCGATGCACGAGAAGTACAAGAACGCGACCAACTGATGCGCGCCTGCACGACG GCCTTGAGCGTTCGCCCGCG
Downstream 100 bases:
>100_bases AAGCGGCCGATCCGCGGGGCGGGCGGCCGAATGCCCTGCCGGTCCTCCTGCCCTTCGCGCTCCCGGAGGACCGCGCGGCG GCGCGCCTGCGCCCGGCCCA
Product: polar amino acid ABC transporter inner membrane protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIATIQAWFQQLYETTGFNFTVFYDPYDWDRYVAGLRMTLLLGISTILASLVIGAVGALLQSGPSRVLRALVNGFVVVFR NTPPLVQIFFFYFGLGTLLPDIRSADGLRAPILNNVQWAIISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKA YRYVVLPLALRVCLPALNNNLINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHRWER ALRIPGYGR
Sequences:
>Translated_249_residues MIATIQAWFQQLYETTGFNFTVFYDPYDWDRYVAGLRMTLLLGISTILASLVIGAVGALLQSGPSRVLRALVNGFVVVFR NTPPLVQIFFFYFGLGTLLPDIRSADGLRAPILNNVQWAIISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKA YRYVVLPLALRVCLPALNNNLINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHRWER ALRIPGYGR >Mature_249_residues MIATIQAWFQQLYETTGFNFTVFYDPYDWDRYVAGLRMTLLLGISTILASLVIGAVGALLQSGPSRVLRALVNGFVVVFR NTPPLVQIFFFYFGLGTLLPDIRSADGLRAPILNNVQWAIISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKA YRYVVLPLALRVCLPALNNNLINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHRWER ALRIPGYGR
Specific function: Probably part of the ABC transporter complex yxeMNO that could be involved in amino-acid import. May transport S- methylcysteine. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=29.6296296296296, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788645, Length=244, Percent_Identity=29.9180327868852, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=31.9047619047619, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787030, Length=225, Percent_Identity=29.3333333333333, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=27.6995305164319, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787086, Length=182, Percent_Identity=27.4725274725275, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI48994930, Length=126, Percent_Identity=31.7460317460317, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786873, Length=201, Percent_Identity=25.3731343283582, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787087, Length=222, Percent_Identity=26.1261261261261, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87082239, Length=175, Percent_Identity=29.1428571428571, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27858; Mature: 27858
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATIQAWFQQLYETTGFNFTVFYDPYDWDRYVAGLRMTLLLGISTILASLVIGAVGALL CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSGPSRVLRALVNGFVVVFRNTPPLVQIFFFYFGLGTLLPDIRSADGLRAPILNNVQWAI HCCHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHH ISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKAYRYVVLPLALRVCLPALNNN HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHRWER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRIPGYGR HHCCCCCCC >Mature Secondary Structure MIATIQAWFQQLYETTGFNFTVFYDPYDWDRYVAGLRMTLLLGISTILASLVIGAVGALL CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSGPSRVLRALVNGFVVVFRNTPPLVQIFFFYFGLGTLLPDIRSADGLRAPILNNVQWAI HCCHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHH ISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKAYRYVVLPLALRVCLPALNNN HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHRWER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRIPGYGR HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]