| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749707
Identifier: 170749707
GI number: 170749707
Start: 3507882
End: 3508772
Strand: Direct
Name: 170749707
Synonym: Mrad2831_3306
Alternate gene names: NA
Gene position: 3507882-3508772 (Clockwise)
Preceding gene: 170749706
Following gene: 170749713
Centisome position: 57.72
GC content: 73.29
Gene sequence:
>891_bases ATGGACACGAATGCGGGACACGGCCGCTACGGCTACAGCGCCCTTCCCGACAGGCCGGTCTACGACTGGCCGGAGGGCAA GCGGCTGGCCGTCTATCTCGGGCTGAACCTCGAGACCTTCGCGTTCGGCGAGGGCCTCGGCGCCGAGCTGGCCCCGGGCG GCCCGCAGCCGGACGTGCTCAACTACGCGTGGCGCGACTGGGGCAACCGGGTCGGCGCCTGGCGGATCGCCGCGATGCTG GACGAACTGGCGATGCCCGCGAGCGTGCTCGTCAACAGCAACCTGTACCGGGACTGCCCCGGGCTGATCGAGGCGTTCCG GGCGCGGGGCGACGAGATCGTCGGCCACGGACGCACCAACGCCGAGCGGCAGGGCATCCTCGACGAGGCCGCCGAGCGGG CGCTGATCGCCGAGACGACGCAGGTGATCGCCGCGCGGGAGGGCCGCCCCCCGGCCGGCTGGCTCGGGCCGTGGATCTCG CAGTCGCGGGTGACGCCCGACCTGCTGGCCGAGGCCGGCTACCGCTACCTGCTCGACTGGGACCACGACGACCAGCCGAC CTGGTTCAAAACCCGCGGCGGCGGCCGGATCCTGACGGTGCCCTACCCGCAGGAACTCAACGACATCCCCGCCATCGTCG CCCGCAAGGAGACGGGCCGCCAGTTCGCCGACGCGCTCGTCGACGCCTTCGACGAGATGCTGGAGCAGTCCCGGACCGCA CCCCTGGTCATGGGCATCGCGCTCCATCCCTACATCGTCGGGCGGCCGCACCGGCTGCGGCCCCTGCGGCGGGCGCTCCG GCACATCGTCGACCGGCGCGCCGACATCTGGCTCACCACCGCGGGGGCGATCGCCGACCACATCGTGGCGCGGGAGGCCG GGCCGCGCTGA
Upstream 100 bases:
>100_bases TGGAGCAGGGCCGGGTCGTCGCGCGCGGAACCGCCGCGGAGCTGTCGGCGGACAAGGGGCTCGAAGCGGCCTATCTCGGT GCGGCGTAAGGGGGGCCACG
Downstream 100 bases:
>100_bases CGCGGTCCGGACCCCGGGGCCGACCCGGCGAGCTCAGAGCACCTGCGACAGGAACCGGCGCGTCCGCTCGTCCCGGGCGG AGGCGAAGAAGGTCGCGGGC
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Chitin Deacetylase; Chitooligosaccharide Deacetylase; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Protein Pda4B; Chitooligosaccharide Deacetylase Protein; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Deacetylase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MDTNAGHGRYGYSALPDRPVYDWPEGKRLAVYLGLNLETFAFGEGLGAELAPGGPQPDVLNYAWRDWGNRVGAWRIAAML DELAMPASVLVNSNLYRDCPGLIEAFRARGDEIVGHGRTNAERQGILDEAAERALIAETTQVIAAREGRPPAGWLGPWIS QSRVTPDLLAEAGYRYLLDWDHDDQPTWFKTRGGGRILTVPYPQELNDIPAIVARKETGRQFADALVDAFDEMLEQSRTA PLVMGIALHPYIVGRPHRLRPLRRALRHIVDRRADIWLTTAGAIADHIVAREAGPR
Sequences:
>Translated_296_residues MDTNAGHGRYGYSALPDRPVYDWPEGKRLAVYLGLNLETFAFGEGLGAELAPGGPQPDVLNYAWRDWGNRVGAWRIAAML DELAMPASVLVNSNLYRDCPGLIEAFRARGDEIVGHGRTNAERQGILDEAAERALIAETTQVIAAREGRPPAGWLGPWIS QSRVTPDLLAEAGYRYLLDWDHDDQPTWFKTRGGGRILTVPYPQELNDIPAIVARKETGRQFADALVDAFDEMLEQSRTA PLVMGIALHPYIVGRPHRLRPLRRALRHIVDRRADIWLTTAGAIADHIVAREAGPR >Mature_296_residues MDTNAGHGRYGYSALPDRPVYDWPEGKRLAVYLGLNLETFAFGEGLGAELAPGGPQPDVLNYAWRDWGNRVGAWRIAAML DELAMPASVLVNSNLYRDCPGLIEAFRARGDEIVGHGRTNAERQGILDEAAERALIAETTQVIAAREGRPPAGWLGPWIS QSRVTPDLLAEAGYRYLLDWDHDDQPTWFKTRGGGRILTVPYPQELNDIPAIVARKETGRQFADALVDAFDEMLEQSRTA PLVMGIALHPYIVGRPHRLRPLRRALRHIVDRRADIWLTTAGAIADHIVAREAGPR
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32857; Mature: 32857
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNAGHGRYGYSALPDRPVYDWPEGKRLAVYLGLNLETFAFGEGLGAELAPGGPQPDVL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHH NYAWRDWGNRVGAWRIAAMLDELAMPASVLVNSNLYRDCPGLIEAFRARGDEIVGHGRTN HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHCCHHHHHHHHHCCCEEEECCCCC AERQGILDEAAERALIAETTQVIAAREGRPPAGWLGPWISQSRVTPDLLAEAGYRYLLDW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHCCCEEEEEC DHDDQPTWFKTRGGGRILTVPYPQELNDIPAIVARKETGRQFADALVDAFDEMLEQSRTA CCCCCCCEEEECCCCEEEEECCCHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC PLVMGIALHPYIVGRPHRLRPLRRALRHIVDRRADIWLTTAGAIADHIVAREAGPR CEEEEEECCCEECCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTNAGHGRYGYSALPDRPVYDWPEGKRLAVYLGLNLETFAFGEGLGAELAPGGPQPDVL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCHHH NYAWRDWGNRVGAWRIAAMLDELAMPASVLVNSNLYRDCPGLIEAFRARGDEIVGHGRTN HHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHCCHHHHHHHHHCCCEEEECCCCC AERQGILDEAAERALIAETTQVIAAREGRPPAGWLGPWISQSRVTPDLLAEAGYRYLLDW HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHCCCEEEEEC DHDDQPTWFKTRGGGRILTVPYPQELNDIPAIVARKETGRQFADALVDAFDEMLEQSRTA CCCCCCCEEEECCCCEEEEECCCHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC PLVMGIALHPYIVGRPHRLRPLRRALRHIVDRRADIWLTTAGAIADHIVAREAGPR CEEEEEECCCEECCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA