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The map label for this gene is glxA [H]

Identifier: 170749713

GI number: 170749713

Start: 3513506

End: 3514462

Strand: Direct

Name: glxA [H]

Synonym: Mrad2831_3312

Alternate gene names: 170749713

Gene position: 3513506-3514462 (Clockwise)

Preceding gene: 170749707

Following gene: 170749726

Centisome position: 57.81

GC content: 74.09

Gene sequence:

>957_bases
ATGGACGCGGAGACCGGGGACCGACCGCAGGAGATCGGCTTCATCCTCGTGCCCGGCTTCGCGCTGCTGTCCTTCGCCTC
GGGCTGCGAGCCGTTCCGCGCGGCCAACGAGCTCGCCGGGCGGCCGCTCTACCGGCTGCGCTATTTCGGCGAGGCAGAGG
GCCGGGTCGCCGCCTCGTCGGGCGCAGAGGTCCCCACCGAGGCGCTGCCGCGCCTGCGCGGCCAGCTCCACACCCTGTTC
GTCTGCGCCGGCGGCGAGCCGAACGGGTGGGACAGGCCCGAGATCCACGCGACCCTGCGGCGGATGGCCCGGCTCGGCGT
CCGCATCGGCGGCATCTCGGGCGGTCCCTACCTGATGGCCGCGGCGGGCCTACTGGCCGATCGCGCGTTCACGCTCCACT
GGGAATATGCAGGCGCCACGGTCGAGACCTTCCCGGAGGCACGCCTGAGCCGGGCGCGCTACGTCGCCGACGGCGATCGC
CTGACCTGCGGCGGCGGGGTCGCGCCCCTGGAGATGGCCCACGCCCTGATCGCCGAGCGCATGGGCGAGGCTTTCGCCCG
CCGCGTCTCCGACTGGTTCCTCCACACCGCCATCGGCGCCGCCGACGACCCGCAGCGGGCCTCCGCGGTCGAGCGCTACG
GGGTCCACCATCCGGCCCTGCTGGCGGTACTGGAGACCATGGAGAAGACCGTGGAGGCGCCGCTCGGCCGCCTCGCGATG
GCGCGCCTCGCGGCGATCAGCCCGCGCCACCTCGACCGGCTGTTCCTCGAGAAGCTCGGGCTGAGCTTCTCGGCCCAGTA
CCGGGCGATCCGCCTCGCCCACGGACGGCGCCTGCTGCGCCAGAGCCCGCTCCGGATCGGAGAGATCGCCACAGCCTGCG
GCTTCTCGAGCGCGGCCCATTTCGCCCGCTGCTACCGGTCCCGGTTCGGCTGCAGCCCGTCCGCGGAGCGAGCGTGA

Upstream 100 bases:

>100_bases
AAGACGACCCGCAGAATGATAGATGCCGGACGAGACGTTTGACCGAAACGGACGACTTCTTGCACGTTCGAGCCGTCAGG
GAGCGGAGGGCGCGGGCGAC

Downstream 100 bases:

>100_bases
CGTCCACCCGGGCAGTCCGAGCGGTCTAGTCGCGCGCGTCCGGGAGAGCCGGCGGGTCGGCGGGATCGCCCCGGCGCAGC
GCGACGCCGCTGGTGCCCTG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDAETGDRPQEIGFILVPGFALLSFASGCEPFRAANELAGRPLYRLRYFGEAEGRVAASSGAEVPTEALPRLRGQLHTLF
VCAGGEPNGWDRPEIHATLRRMARLGVRIGGISGGPYLMAAAGLLADRAFTLHWEYAGATVETFPEARLSRARYVADGDR
LTCGGGVAPLEMAHALIAERMGEAFARRVSDWFLHTAIGAADDPQRASAVERYGVHHPALLAVLETMEKTVEAPLGRLAM
ARLAAISPRHLDRLFLEKLGLSFSAQYRAIRLAHGRRLLRQSPLRIGEIATACGFSSAAHFARCYRSRFGCSPSAERA

Sequences:

>Translated_318_residues
MDAETGDRPQEIGFILVPGFALLSFASGCEPFRAANELAGRPLYRLRYFGEAEGRVAASSGAEVPTEALPRLRGQLHTLF
VCAGGEPNGWDRPEIHATLRRMARLGVRIGGISGGPYLMAAAGLLADRAFTLHWEYAGATVETFPEARLSRARYVADGDR
LTCGGGVAPLEMAHALIAERMGEAFARRVSDWFLHTAIGAADDPQRASAVERYGVHHPALLAVLETMEKTVEAPLGRLAM
ARLAAISPRHLDRLFLEKLGLSFSAQYRAIRLAHGRRLLRQSPLRIGEIATACGFSSAAHFARCYRSRFGCSPSAERA
>Mature_318_residues
MDAETGDRPQEIGFILVPGFALLSFASGCEPFRAANELAGRPLYRLRYFGEAEGRVAASSGAEVPTEALPRLRGQLHTLF
VCAGGEPNGWDRPEIHATLRRMARLGVRIGGISGGPYLMAAAGLLADRAFTLHWEYAGATVETFPEARLSRARYVADGDR
LTCGGGVAPLEMAHALIAERMGEAFARRVSDWFLHTAIGAADDPQRASAVERYGVHHPALLAVLETMEKTVEAPLGRLAM
ARLAAISPRHLDRLFLEKLGLSFSAQYRAIRLAHGRRLLRQSPLRIGEIATACGFSSAAHFARCYRSRFGCSPSAERA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34497; Mature: 34497

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAETGDRPQEIGFILVPGFALLSFASGCEPFRAANELAGRPLYRLRYFGEAEGRVAASS
CCCCCCCCHHHCCEEEECHHHHHHHHCCCCHHHHHHHHCCCCEEEHEECCCCCCCEECCC
GAEVPTEALPRLRGQLHTLFVCAGGEPNGWDRPEIHATLRRMARLGVRIGGISGGPYLMA
CCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHH
AAGLLADRAFTLHWEYAGATVETFPEARLSRARYVADGDRLTCGGGVAPLEMAHALIAER
HHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHH
MGEAFARRVSDWFLHTAIGAADDPQRASAVERYGVHHPALLAVLETMEKTVEAPLGRLAM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ARLAAISPRHLDRLFLEKLGLSFSAQYRAIRLAHGRRLLRQSPLRIGEIATACGFSSAAH
HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH
FARCYRSRFGCSPSAERA
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDAETGDRPQEIGFILVPGFALLSFASGCEPFRAANELAGRPLYRLRYFGEAEGRVAASS
CCCCCCCCHHHCCEEEECHHHHHHHHCCCCHHHHHHHHCCCCEEEHEECCCCCCCEECCC
GAEVPTEALPRLRGQLHTLFVCAGGEPNGWDRPEIHATLRRMARLGVRIGGISGGPYLMA
CCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCHHHHH
AAGLLADRAFTLHWEYAGATVETFPEARLSRARYVADGDRLTCGGGVAPLEMAHALIAER
HHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHH
MGEAFARRVSDWFLHTAIGAADDPQRASAVERYGVHHPALLAVLETMEKTVEAPLGRLAM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ARLAAISPRHLDRLFLEKLGLSFSAQYRAIRLAHGRRLLRQSPLRIGEIATACGFSSAAH
HHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH
FARCYRSRFGCSPSAERA
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]