| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is livK [H]
Identifier: 170749704
GI number: 170749704
Start: 3503338
End: 3504519
Strand: Direct
Name: livK [H]
Synonym: Mrad2831_3303
Alternate gene names: 170749704
Gene position: 3503338-3504519 (Clockwise)
Preceding gene: 170749702
Following gene: 170749705
Centisome position: 57.64
GC content: 70.22
Gene sequence:
>1182_bases ATGGCCTCCTTCCTGCCCCCCGCCCTGCGCCGCATCGCGGTGACGACGAGCGCCCTGCTCGGCCTCGCCGTCTCGGCCGC GCAGGCGGCCGACACCGTCAAGATCGGCCTCGTGACCGCCCTGAGCGGCCAGTCCGCGAAATCCGGCGAGGCGATCTCCC GCGGGATCGGGCTCGCGATCGACGAGATCAACGCCAAGGGCGGCGTCCTCGGGCGCCCCCTCGAGCTCGTGGCCCGCGAC GACGAGGCCAACCCGTCCAAGGGCGTGCTGGCGACCCGCGAGCTGATCCAGCGCGTCGGCGTCGTCGCGGTGGTCGGCGG CCTCGACACGCCGGTCTCGATGGCGATCGTGCCGATCGCCAACCAGATGAAGGTGCCGTTCATCGGACCCTGGGCGGCCG GCACAGGCATCACCCGCAACGGCGCCGCCGACAATTACGCCTTCCGCGTCTCCGCGGTCGACGCCCTCGTCGACGAGGCG CTGGTCGCCTACGCGGTGAAGACCTACGGGGCGAAGAAGCCCGGCATGATCCTCGTCAACAACGCCTGGGGCGAGTCGAA CCAGAAGGGCCTCAAGGACGCCCTCCAGGCGGCCAACCTCCCGGCGGCCGGCATCGAGAAGTACGAGGCCAACGACGTCG ACATGGTGCCCCAGCTGTCCCGGCTGAAGGAGGCCGGCGCCGACGCGCTGTTCCTCGTCGGCAATGTCGGACCCTCGGCC CAGGTGGTGAAGTCGCTGGACCGGATGGGCTGGACGGTGCCGGTCGTCTCGCACTGGGGCCCGGCCGGCGGGCGCTTCGA CGAGCTCGCCGGCCCGAGCGCCGGCAAGGTCCACTTCATCCAGACCTTCACCTTCGCGGGCAACGCGTCGCCGAAGGCGA GCGCGGTGCTCGATGCGCTCAAGGCCAAGTACCCGGCGATCAAGTCGATGGCCGACGTCACCCCCGCCGTCGGCATCGCC AACGCCTACGACGCGACGCACCTGCTGGCGCTCGCCATCCAGGCCGCCGGCTCGACCGAGGGCCCGAAGGTCCGCGACGG CTTCTACAAGATCGGCACCTATCCGGGCCTGATCAAAACCTACGACAAGCCCTTCGCCCCCGGCCAGCACGACGCGCTGG GACCGAACGATTACGTGTTCACCCGCTTCAAGGACGGTGAGATCGTCGCGGTGACCAACTGA
Upstream 100 bases:
>100_bases CCGGGAGTGCACGCACGGTCAGGCGCGGTCGAAGAAGCATCGGGTTTTCAGTGGCATGGAGGTTGCGGTCGGCTGGTCTG CCCCGCTCCCGGAGACAGCC
Downstream 100 bases:
>100_bases GCCCGGCGATGCTGACCTCCATCCTCGTCAGCGGCCTCGGCCTCGGCAGCATGTACGGGCTCGTGGCCCTCGGCTTCCAC GTGACCTACGCGGTGTCGGG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: L-BP; LS-BP [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MASFLPPALRRIAVTTSALLGLAVSAAQAADTVKIGLVTALSGQSAKSGEAISRGIGLAIDEINAKGGVLGRPLELVARD DEANPSKGVLATRELIQRVGVVAVVGGLDTPVSMAIVPIANQMKVPFIGPWAAGTGITRNGAADNYAFRVSAVDALVDEA LVAYAVKTYGAKKPGMILVNNAWGESNQKGLKDALQAANLPAAGIEKYEANDVDMVPQLSRLKEAGADALFLVGNVGPSA QVVKSLDRMGWTVPVVSHWGPAGGRFDELAGPSAGKVHFIQTFTFAGNASPKASAVLDALKAKYPAIKSMADVTPAVGIA NAYDATHLLALAIQAAGSTEGPKVRDGFYKIGTYPGLIKTYDKPFAPGQHDALGPNDYVFTRFKDGEIVAVTN
Sequences:
>Translated_393_residues MASFLPPALRRIAVTTSALLGLAVSAAQAADTVKIGLVTALSGQSAKSGEAISRGIGLAIDEINAKGGVLGRPLELVARD DEANPSKGVLATRELIQRVGVVAVVGGLDTPVSMAIVPIANQMKVPFIGPWAAGTGITRNGAADNYAFRVSAVDALVDEA LVAYAVKTYGAKKPGMILVNNAWGESNQKGLKDALQAANLPAAGIEKYEANDVDMVPQLSRLKEAGADALFLVGNVGPSA QVVKSLDRMGWTVPVVSHWGPAGGRFDELAGPSAGKVHFIQTFTFAGNASPKASAVLDALKAKYPAIKSMADVTPAVGIA NAYDATHLLALAIQAAGSTEGPKVRDGFYKIGTYPGLIKTYDKPFAPGQHDALGPNDYVFTRFKDGEIVAVTN >Mature_392_residues ASFLPPALRRIAVTTSALLGLAVSAAQAADTVKIGLVTALSGQSAKSGEAISRGIGLAIDEINAKGGVLGRPLELVARDD EANPSKGVLATRELIQRVGVVAVVGGLDTPVSMAIVPIANQMKVPFIGPWAAGTGITRNGAADNYAFRVSAVDALVDEAL VAYAVKTYGAKKPGMILVNNAWGESNQKGLKDALQAANLPAAGIEKYEANDVDMVPQLSRLKEAGADALFLVGNVGPSAQ VVKSLDRMGWTVPVVSHWGPAGGRFDELAGPSAGKVHFIQTFTFAGNASPKASAVLDALKAKYPAIKSMADVTPAVGIAN AYDATHLLALAIQAAGSTEGPKVRDGFYKIGTYPGLIKTYDKPFAPGQHDALGPNDYVFTRFKDGEIVAVTN
Specific function: This protein is a component of the leucine-specific transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids in E.coli [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=335, Percent_Identity=25.9701492537313, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI48994941, Length=285, Percent_Identity=22.8070175438596, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40643; Mature: 40512
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFLPPALRRIAVTTSALLGLAVSAAQAADTVKIGLVTALSGQSAKSGEAISRGIGLAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCHHHHHCCCEEE DEINAKGGVLGRPLELVARDDEANPSKGVLATRELIQRVGVVAVVGGLDTPVSMAIVPIA EECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEECC NQMKVPFIGPWAAGTGITRNGAADNYAFRVSAVDALVDEALVAYAVKTYGAKKPGMILVN CCCCCCEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE NAWGESNQKGLKDALQAANLPAAGIEKYEANDVDMVPQLSRLKEAGADALFLVGNVGPSA CCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHH QVVKSLDRMGWTVPVVSHWGPAGGRFDELAGPSAGKVHFIQTFTFAGNASPKASAVLDAL HHHHHHHHCCCEEEEHHCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHH KAKYPAIKSMADVTPAVGIANAYDATHLLALAIQAAGSTEGPKVRDGFYKIGTYPGLIKT HHHCHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHH YDKPFAPGQHDALGPNDYVFTRFKDGEIVAVTN CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC >Mature Secondary Structure ASFLPPALRRIAVTTSALLGLAVSAAQAADTVKIGLVTALSGQSAKSGEAISRGIGLAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCHHHHHCCCEEE DEINAKGGVLGRPLELVARDDEANPSKGVLATRELIQRVGVVAVVGGLDTPVSMAIVPIA EECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEECC NQMKVPFIGPWAAGTGITRNGAADNYAFRVSAVDALVDEALVAYAVKTYGAKKPGMILVN CCCCCCEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE NAWGESNQKGLKDALQAANLPAAGIEKYEANDVDMVPQLSRLKEAGADALFLVGNVGPSA CCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHH QVVKSLDRMGWTVPVVSHWGPAGGRFDELAGPSAGKVHFIQTFTFAGNASPKASAVLDAL HHHHHHHHCCCEEEEHHCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHH KAKYPAIKSMADVTPAVGIANAYDATHLLALAIQAAGSTEGPKVRDGFYKIGTYPGLIKT HHHCHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHH YDKPFAPGQHDALGPNDYVFTRFKDGEIVAVTN CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3891753; 4077929; 2195019; 8041620; 9278503; 6990419; 9298646; 2649683 [H]