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The map label for this gene is ycdO [H]

Identifier: 170749681

GI number: 170749681

Start: 3476393

End: 3477280

Strand: Reverse

Name: ycdO [H]

Synonym: Mrad2831_3279

Alternate gene names: 170749681

Gene position: 3477280-3476393 (Counterclockwise)

Preceding gene: 170749682

Following gene: 170749680

Centisome position: 57.21

GC content: 72.75

Gene sequence:

>888_bases
ATGCCCGAGTCTCCACGCCTCGCCCGGGACCGATCCCGCACCGCGGCCCTCGCTCTGGCGATGCTGATCGGCGCCGGCGA
TACCCGCCCGGGCTGGTCCCTCGACCTGCCGGACGGCCCGCGGCCCGCGCGGCCGTCCCGGCCGGTGGCGCCGGAGCTGG
CCGCGGCCCTCGCGGCCTACAGGACCTACGTCGTGGCCCAGGCCGACGCCTTCGTGCGCGAGACCGCGCGCTTCGTCGCG
GCGATCCAGGCCGGGCAACTCGCGGAGGCGCGCCGGCTCTACGCCCCGGCGCGCGCGCCCTACGAGCGCATCGAGCCGGT
GGCGGCGCTGTTTCCCGAACTGATCAAGCGGCTCGACGTGCGCAGCGACGAGTTCGAGCTGCGCGAGCGCGATCCCGCCT
TCGTCGGGTTCCATCGCCTGGAGATGGTCTTGTTCACCCTGAGCACGACGGAGGGGCTCGGCGAGATCGCGGAGCGGCTC
GCCGCCGAGACCGTGACCCTGCGCGACCGCATCGCGGCGCTCGCCATCCCGCCCGCCCGGGCGGTCGGGGCGGCCTCGGC
CCTGATCGAGGGTATCGCCGCCACCAAGATCAGCGGCGACGAGGAGCGCTACAGCCGCACCGACCTGTGGGACTTCCAGG
CCAACATCGAGGGCTCGAAGGTCGTGTTCACGCTCCTGCGCCCGCTCCTGGCGGACCGCGACTTCGTGGCCCGGGTCGAG
CGCAGCTACAAGCGGGTCGAGGACCTGCTCGCCCGCTACCGCAGCCCGGACGGCGGTTTCCAGAGCTACGACAACCTGAC
GGCCCGGGATCGCAACGCCCTGAAGGGTCCCATCACCCTTCTGGCTGAAGATCTGTCGACGCTGCGTGGCCGGCTCGGTC
TAGATTGA

Upstream 100 bases:

>100_bases
ACCGCCGCTGCGGTCGGAAGTTGCCCGACGGTGAGGCCTCGATTAGCCGGACCCCGCGGCCGGCTCGGGCCGCGCCCCGT
GTCACGATCCGCCGCCGCCC

Downstream 100 bases:

>100_bases
TATCATTGCCGAGGTGTCGTCCTGTGGCCTTCCTTATAGGCTACAGTGCGGTAGCACGACCAGATTTTGCCGAGCGACAA
TGCGGTTCCCTTCACCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPESPRLARDRSRTAALALAMLIGAGDTRPGWSLDLPDGPRPARPSRPVAPELAAALAAYRTYVVAQADAFVRETARFVA
AIQAGQLAEARRLYAPARAPYERIEPVAALFPELIKRLDVRSDEFELRERDPAFVGFHRLEMVLFTLSTTEGLGEIAERL
AAETVTLRDRIAALAIPPARAVGAASALIEGIAATKISGDEERYSRTDLWDFQANIEGSKVVFTLLRPLLADRDFVARVE
RSYKRVEDLLARYRSPDGGFQSYDNLTARDRNALKGPITLLAEDLSTLRGRLGLD

Sequences:

>Translated_295_residues
MPESPRLARDRSRTAALALAMLIGAGDTRPGWSLDLPDGPRPARPSRPVAPELAAALAAYRTYVVAQADAFVRETARFVA
AIQAGQLAEARRLYAPARAPYERIEPVAALFPELIKRLDVRSDEFELRERDPAFVGFHRLEMVLFTLSTTEGLGEIAERL
AAETVTLRDRIAALAIPPARAVGAASALIEGIAATKISGDEERYSRTDLWDFQANIEGSKVVFTLLRPLLADRDFVARVE
RSYKRVEDLLARYRSPDGGFQSYDNLTARDRNALKGPITLLAEDLSTLRGRLGLD
>Mature_294_residues
PESPRLARDRSRTAALALAMLIGAGDTRPGWSLDLPDGPRPARPSRPVAPELAAALAAYRTYVVAQADAFVRETARFVAA
IQAGQLAEARRLYAPARAPYERIEPVAALFPELIKRLDVRSDEFELRERDPAFVGFHRLEMVLFTLSTTEGLGEIAERLA
AETVTLRDRIAALAIPPARAVGAASALIEGIAATKISGDEERYSRTDLWDFQANIEGSKVVFTLLRPLLADRDFVARVER
SYKRVEDLLARYRSPDGGFQSYDNLTARDRNALKGPITLLAEDLSTLRGRLGLD

Specific function: Unknown

COG id: COG2822

COG function: function code P; Predicted periplasmic lipoprotein involved in iron transport

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0409 family [H]

Homologues:

Organism=Escherichia coli, GI1787254, Length=245, Percent_Identity=53.0612244897959, Blast_Score=268, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008972
- InterPro:   IPR018976 [H]

Pfam domain/function: PF09375 Peptidase_M75 [H]

EC number: NA

Molecular weight: Translated: 32484; Mature: 32353

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESPRLARDRSRTAALALAMLIGAGDTRPGWSLDLPDGPRPARPSRPVAPELAAALAAY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
RTYVVAQADAFVRETARFVAAIQAGQLAEARRLYAPARAPYERIEPVAALFPELIKRLDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
RSDEFELRERDPAFVGFHRLEMVLFTLSTTEGLGEIAERLAAETVTLRDRIAALAIPPAR
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AVGAASALIEGIAATKISGDEERYSRTDLWDFQANIEGSKVVFTLLRPLLADRDFVARVE
HHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
RSYKRVEDLLARYRSPDGGFQSYDNLTARDRNALKGPITLLAEDLSTLRGRLGLD
HHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PESPRLARDRSRTAALALAMLIGAGDTRPGWSLDLPDGPRPARPSRPVAPELAAALAAY
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
RTYVVAQADAFVRETARFVAAIQAGQLAEARRLYAPARAPYERIEPVAALFPELIKRLDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
RSDEFELRERDPAFVGFHRLEMVLFTLSTTEGLGEIAERLAAETVTLRDRIAALAIPPAR
CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AVGAASALIEGIAATKISGDEERYSRTDLWDFQANIEGSKVVFTLLRPLLADRDFVARVE
HHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
RSYKRVEDLLARYRSPDGGFQSYDNLTARDRNALKGPITLLAEDLSTLRGRLGLD
HHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]