| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is hexR [C]
Identifier: 170749649
GI number: 170749649
Start: 3440271
End: 3441209
Strand: Reverse
Name: hexR [C]
Synonym: Mrad2831_3246
Alternate gene names: 170749649
Gene position: 3441209-3440271 (Counterclockwise)
Preceding gene: 170749650
Following gene: 170749648
Centisome position: 56.62
GC content: 74.33
Gene sequence:
>939_bases GTGGCACTGCAACCTGGGGAAGCATCTGTCGCCCAGCGCATCGCGCAGGCGTACCCGTCCCTCAGCGCCGCCCATCGGCA GGTTGCCCGCTTCGTCCTCGATCACCCGCTCCGCGCCGCGACGCTCCCGGTCAACGAGCTGGCGGATCTCGTCGGCGTCT CCGTCGCGACCGCCAACCGGTTCGCCCGCGCTGTCGGCTACGCGGGCTACGCGAAGTTCCGCGCGGCCCTCGTCCTCGGC TACGAGAAGGCGCTCGCCCCGGTCGAGAAGCTGCGCGGCGGCCGGGAGCAGCCCACGACCGTGTCCGGGATCCTCGACGG GGCCCTGGCCGACATCGTCCGCAACATCGAGGCGACGCGGCGCGGGCTCGACGGCGAGACGTGCGGCCGCGCGGTCGAGG CGATCCGGCAGGCCCGGCGAGTCTACGTGGTGGGCCTGGGCAGCAGCAGCTGGCCGGCCGGCATCCTCGCGCGCAACCTC GACGTGAACCGCGAGGACGTCCACCTGCTGGCGACGCTGGAGGGGCCGGGCTTCGCCGCGCGGACCCTGCGCCGGCTGAC GGCCGACGACCTCGTCATCGCCCTCGCCACCCCGCGCTACTTCGCCGACACGGTGCGGCTCGCCGAGATCGCCCGGAAGC ACGGCGCCGCGGTGCTGGCGCTGACCGACGGCCCGCACTCGCCCCTCGTGGCGACCGCCACCCTCGCGCTCTACGCCCAG ACGGACTGCCACTACTTCGCGGCCTCGGATGCCAGCCTGACGGCCCTCGTCGAGGCCCTCGCGAGCGCCTTCGCCCACGC GACCGTGGATCTGGTGCCGGCCGCGACGCGGGTGACGGAAGCGGTGCTGCCCTGGCTCGACCGCGACTACGCCGCCTGGC CGCCGCAGGGCGGAGCCGACGACCTGTCCGACACACCGCCTCCGGGAACCGTTCCATGA
Upstream 100 bases:
>100_bases TGCAGGGGATGCCACCGGAAGCGGCAGGTCTCGGCTTGCAAATGATCTAAAAGTTTCTCAATCTCGGCTCAGTTGAGAAT TTTCGATCGGGCCTGGCGCC
Downstream 100 bases:
>100_bases GCGACCACCGCCCCGTTCTCGTGATCCACGGCGGCGCCGGGACGATCGCGCAGAATCAGGATGATCCGGGCGAGGCGCGC TACCACGCGGCCCTCGCGGA
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MALQPGEASVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANRFARAVGYAGYAKFRAALVLG YEKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATRRGLDGETCGRAVEAIRQARRVYVVGLGSSSWPAGILARNL DVNREDVHLLATLEGPGFAARTLRRLTADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQ TDCHYFAASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWLDRDYAAWPPQGGADDLSDTPPPGTVP
Sequences:
>Translated_312_residues MALQPGEASVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANRFARAVGYAGYAKFRAALVLG YEKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATRRGLDGETCGRAVEAIRQARRVYVVGLGSSSWPAGILARNL DVNREDVHLLATLEGPGFAARTLRRLTADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQ TDCHYFAASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWLDRDYAAWPPQGGADDLSDTPPPGTVP >Mature_311_residues ALQPGEASVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANRFARAVGYAGYAKFRAALVLGY EKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATRRGLDGETCGRAVEAIRQARRVYVVGLGSSSWPAGILARNLD VNREDVHLLATLEGPGFAARTLRRLTADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQT DCHYFAASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWLDRDYAAWPPQGGADDLSDTPPPGTVP
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788159, Length=266, Percent_Identity=25.187969924812, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000281 - InterPro: IPR001347 - InterPro: IPR011991 [H]
Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 32896; Mature: 32764
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQPGEASVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH FARAVGYAGYAKFRAALVLGYEKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RGLDGETCGRAVEAIRQARRVYVVGLGSSSWPAGILARNLDVNREDVHLLATLEGPGFAA CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEECCCCHHH RTLRRLTADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQ HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHEEE TDCHYFAASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWLDRDYAAWPPQGGAD CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DLSDTPPPGTVP CCCCCCCCCCCC >Mature Secondary Structure ALQPGEASVAQRIAQAYPSLSAAHRQVARFVLDHPLRAATLPVNELADLVGVSVATANR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH FARAVGYAGYAKFRAALVLGYEKALAPVEKLRGGREQPTTVSGILDGALADIVRNIEATR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RGLDGETCGRAVEAIRQARRVYVVGLGSSSWPAGILARNLDVNREDVHLLATLEGPGFAA CCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEECCCCHHH RTLRRLTADDLVIALATPRYFADTVRLAEIARKHGAAVLALTDGPHSPLVATATLALYAQ HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHEEE TDCHYFAASDASLTALVEALASAFAHATVDLVPAATRVTEAVLPWLDRDYAAWPPQGGAD CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DLSDTPPPGTVP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]