Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is yisB [H]

Identifier: 170749588

GI number: 170749588

Start: 3360886

End: 3361260

Strand: Reverse

Name: yisB [H]

Synonym: Mrad2831_3183

Alternate gene names: 170749588

Gene position: 3361260-3360886 (Counterclockwise)

Preceding gene: 170749589

Following gene: 170749587

Centisome position: 55.3

GC content: 74.13

Gene sequence:

>375_bases
GTGGTCGGACGGCGCTCGCAGCGCTGGAGCGCCGAGGATCCGGACGCGCCGGGCGTTCTGGGCCCGCCGGACCCGGTCTG
TCCCCTCTGCGAGCGCCCGATCCCGCGCCGCGCCCGCTCCAGCCTCCATCACCTCACGCCGAAGCTCAAGGGCGGGACCC
ATCGCGGAACGGTCCGGCTGCACCAGATCTGCCACTCGGCGATCCACGCCCGCTACAGCGAGGCGGAGATCGCCAAGCGC
CTCGCGGACGTCGAGGCGCTGCGCGCCGATCCGGAGATCGCGCGCTTCCTCGTCTGGGTCCGCGGCAAGCCCGACGATTT
CCACGCGGCGACGCGCATGACCCGTGCGCGGCGGTCGGCGCGGCGCAGCAACTGA

Upstream 100 bases:

>100_bases
CGGGATCCGGGATCGCGAGGCCGAGGCGCTGTTCGGGTCGCGCGTCGGTCCGGCCTGCCCGCAGCCGGCGGACCAGCAGG
GGTAGGAGAGGGAGGCTCGC

Downstream 100 bases:

>100_bases
CCGGCCGGCGTTTACCGCGCGTTCGTCACATCCGCAGGTGGCCGCCGCCCCGTTCCTTGCCGTCAACCCGAACCGGTCCA
GGATCGCCCCGATCGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRLHQICHSAIHARYSEAEIAKR
LADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSARRSN

Sequences:

>Translated_124_residues
MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRLHQICHSAIHARYSEAEIAKR
LADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSARRSN
>Mature_124_residues
MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRLHQICHSAIHARYSEAEIAKR
LADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSARRSN

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13981; Mature: 13981

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
HQICHSAIHARYSEAEIAKRLADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RRSN
HCCC
>Mature Secondary Structure
MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
HQICHSAIHARYSEAEIAKRLADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RRSN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377 [H]