| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yisB [H]
Identifier: 170749588
GI number: 170749588
Start: 3360886
End: 3361260
Strand: Reverse
Name: yisB [H]
Synonym: Mrad2831_3183
Alternate gene names: 170749588
Gene position: 3361260-3360886 (Counterclockwise)
Preceding gene: 170749589
Following gene: 170749587
Centisome position: 55.3
GC content: 74.13
Gene sequence:
>375_bases GTGGTCGGACGGCGCTCGCAGCGCTGGAGCGCCGAGGATCCGGACGCGCCGGGCGTTCTGGGCCCGCCGGACCCGGTCTG TCCCCTCTGCGAGCGCCCGATCCCGCGCCGCGCCCGCTCCAGCCTCCATCACCTCACGCCGAAGCTCAAGGGCGGGACCC ATCGCGGAACGGTCCGGCTGCACCAGATCTGCCACTCGGCGATCCACGCCCGCTACAGCGAGGCGGAGATCGCCAAGCGC CTCGCGGACGTCGAGGCGCTGCGCGCCGATCCGGAGATCGCGCGCTTCCTCGTCTGGGTCCGCGGCAAGCCCGACGATTT CCACGCGGCGACGCGCATGACCCGTGCGCGGCGGTCGGCGCGGCGCAGCAACTGA
Upstream 100 bases:
>100_bases CGGGATCCGGGATCGCGAGGCCGAGGCGCTGTTCGGGTCGCGCGTCGGTCCGGCCTGCCCGCAGCCGGCGGACCAGCAGG GGTAGGAGAGGGAGGCTCGC
Downstream 100 bases:
>100_bases CCGGCCGGCGTTTACCGCGCGTTCGTCACATCCGCAGGTGGCCGCCGCCCCGTTCCTTGCCGTCAACCCGAACCGGTCCA GGATCGCCCCGATCGCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRLHQICHSAIHARYSEAEIAKR LADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSARRSN
Sequences:
>Translated_124_residues MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRLHQICHSAIHARYSEAEIAKR LADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSARRSN >Mature_124_residues MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRLHQICHSAIHARYSEAEIAKR LADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSARRSN
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13981; Mature: 13981
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH HQICHSAIHARYSEAEIAKRLADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSA HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RRSN HCCC >Mature Secondary Structure MVGRRSQRWSAEDPDAPGVLGPPDPVCPLCERPIPRRARSSLHHLTPKLKGGTHRGTVRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH HQICHSAIHARYSEAEIAKRLADVEALRADPEIARFLVWVRGKPDDFHAATRMTRARRSA HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RRSN HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377 [H]