| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is chvI [H]
Identifier: 170749494
GI number: 170749494
Start: 3265584
End: 3266294
Strand: Reverse
Name: chvI [H]
Synonym: Mrad2831_3089
Alternate gene names: 170749494
Gene position: 3266294-3265584 (Counterclockwise)
Preceding gene: 170749498
Following gene: 170749493
Centisome position: 53.74
GC content: 64.98
Gene sequence:
>711_bases ATGCCGACCATCGCCCTCGTCGACGACGACCGGAACATCCTCACCTCTGTGTCGATCGCGCTTGAGACCGAAGGCTACCG CATTCAGACCTACACGGACGGCGCCTCCGCGCTGGACGGTCTGCGCCATTCCCCGCCCGATCTCGCGATCTTCGATATCA AGATGCCGCGCATGGACGGGATGGAGCTTCTCCGACGCCTGCGGCAGAAATCGGACCTTCCCGTGATCTTTCTGACGTCG AAGGACGAGGAGATCGACGAGCTGTTCGGCCTCAAGATGGGCGCGGACGACTTCATCCATAAGCCGTTCTCGCAGCGCCT GCTGGTGGAGCGGGTGAAGGCGGTGCTCCGGCGCTTCGCCAAGGAGGCCCCCGGCGGCACGCCCCGCGGCGAGGCCGAGG TCGCGGCCCGGTCGCTCGAGCGCGGCGCGCTGATGATGGATCCCGAGCGGCACACCTGCACGTGGAAGGGCGAGCCGGTG ACCCTGACGGTCACGGAGTTCCTGATTCTCCAGGCCCTCGCGCAGCGCCCCGGCGTGGTGAAGAGCCGCAACGCCCTCAT GGATGCCGCCTACGACGATCAGGTCTACGTCGATGACCGGACGATCGACAGCCACATCAAGCGGTTGCGGAAGAAGTTCA AGGTCACAGACCAGAGCTTCGACATGATCGAGACGCTCTACGGCGTCGGCTACCGATTCAAGGAGGCGTGA
Upstream 100 bases:
>100_bases CCCGGTTCGCGTTTTTGTCTGCCCCCTCGGGGCCGGGACGTGGCGCGGCCTGTGCGAAGAGCCGGGACCGCGCCTGAGCC CGTTCAGTCAGGGACCGCGC
Downstream 100 bases:
>100_bases TCTCCAGGATCCGCCCCGTGACCGTCCGTACTCAGACCCAGACCGAGGATGCCGCGCCCCGCACCTCCCTGGCCCAGACC CTGTCCCGACCGCTCGGCTG
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPTIALVDDDRNILTSVSIALETEGYRIQTYTDGASALDGLRHSPPDLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTS KDEEIDELFGLKMGADDFIHKPFSQRLLVERVKAVLRRFAKEAPGGTPRGEAEVAARSLERGALMMDPERHTCTWKGEPV TLTVTEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVTDQSFDMIETLYGVGYRFKEA
Sequences:
>Translated_236_residues MPTIALVDDDRNILTSVSIALETEGYRIQTYTDGASALDGLRHSPPDLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTS KDEEIDELFGLKMGADDFIHKPFSQRLLVERVKAVLRRFAKEAPGGTPRGEAEVAARSLERGALMMDPERHTCTWKGEPV TLTVTEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVTDQSFDMIETLYGVGYRFKEA >Mature_235_residues PTIALVDDDRNILTSVSIALETEGYRIQTYTDGASALDGLRHSPPDLAIFDIKMPRMDGMELLRRLRQKSDLPVIFLTSK DEEIDELFGLKMGADDFIHKPFSQRLLVERVKAVLRRFAKEAPGGTPRGEAEVAARSLERGALMMDPERHTCTWKGEPVT LTVTEFLILQALAQRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVTDQSFDMIETLYGVGYRFKEA
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=39.0557939914163, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1790860, Length=233, Percent_Identity=36.9098712446352, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=36.9098712446352, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=34.1991341991342, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=37.6623376623377, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=33.8983050847458, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1789402, Length=233, Percent_Identity=31.3304721030043, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082012, Length=235, Percent_Identity=34.0425531914894, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=31.8777292576419, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787375, Length=232, Percent_Identity=28.0172413793103, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786911, Length=237, Percent_Identity=30.379746835443, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=29.1139240506329, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788550, Length=101, Percent_Identity=33.6633663366337, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26764; Mature: 26633
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIALVDDDRNILTSVSIALETEGYRIQTYTDGASALDGLRHSPPDLAIFDIKMPRMDG CCEEEEEECCCCEEHEEEEEEECCCEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCH MELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIHKPFSQRLLVERVKAVLRRFA HHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH KEAPGGTPRGEAEVAARSLERGALMMDPERHTCTWKGEPVTLTVTEFLILQALAQRPGVV HHCCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCC KSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVTDQSFDMIETLYGVGYRFKEA CCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCC >Mature Secondary Structure PTIALVDDDRNILTSVSIALETEGYRIQTYTDGASALDGLRHSPPDLAIFDIKMPRMDG CEEEEEECCCCEEHEEEEEEECCCEEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCH MELLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIHKPFSQRLLVERVKAVLRRFA HHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH KEAPGGTPRGEAEVAARSLERGALMMDPERHTCTWKGEPVTLTVTEFLILQALAQRPGVV HHCCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCC KSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVTDQSFDMIETLYGVGYRFKEA CCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]