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The map label for this gene is ygiF [H]

Identifier: 170749479

GI number: 170749479

Start: 3246882

End: 3248399

Strand: Reverse

Name: ygiF [H]

Synonym: Mrad2831_3074

Alternate gene names: 170749479

Gene position: 3248399-3246882 (Counterclockwise)

Preceding gene: 170749481

Following gene: 170749478

Centisome position: 53.45

GC content: 72.79

Gene sequence:

>1518_bases
ATGAGCGATACTGATAGTAACGCCGGGGAGGAGCCCCGCGAGGTCGAGCTGAAGTTCGACTGCGCCGGCCCGGACCTGAC
GGCGCTCGCGTCCCATCCCCGGCTGACGGACGCGTCGGCGACCGAGCCCGAACTCCTGGTCACGACCTACTACGACACGC
CCGACCGCGCCCTCCGCGAGGCCGGTCTGACCCTGCGCGTCCGCGCCAAGGGCGGCCGCCACATCCAGACCGTGAAGGCC
GGGAGCGGCGGCGTCGGCCTGTTCGATCGGGCCGAGTGGGAGACCGAGATCGCCGGCGAGACGCCGGAGCCAGCGGCCTG
GTCCGACACGGCCGCCGAGCCGGTCCTGCGCGCGGCCGACGCGCCGCTGGAGCGACTGTTCGCCACCGTCGTGATGCGTC
GGGAGATTCCGGTCATCCAGGGCGAGTCTCGCGTGCTCGTCACCCTCGACGAGGGCAGGGTCGAGACCGCGTCCGGCGAC
GCGCCGCTCTGCGAACTCGAGCTGGAACTCCAGTCCGGCGAGCCGGCCGACCTGTTCGCGCTGGCGCGGGAGCTGGCCGA
GACCGTGCCGCTGCGCCTCGGCGTGAAGGCCAAGAGCGCGGTCGGCTACGCGCTTCTCGACGGGAAAGGGCCGGGCGTCG
TGAAGGCCGAGCCGGTGGAGCTGCCCGAGGGCGCGAGCGCCGGGGAGGTCTTCCGCCGGGTGGCGCGCGCCTGCCTGCGC
CACATGCGCCTCAATGAGACCGCGTTCCTGGAGGGCGGACGGCCGCCCGAGGCGCTCCACCAGATCCGCGTCGCCCTGCG
CCGCCTGCGCTCGGCGCTGTCGCTCTTCGGACCCATGCTGGAGACCGATTCCCGGGCCGCGGCCTTCAATGACGAGATCA
AGCGCGTCACCGAGCCCTTCGGCCACGCGCGCAACCTCGACGTGTTCCTGAGCGACACGCTGCCGGACATCGCGGAGCAG
CGCCCCGACGAGCCCGGCCTCGACGCCTTGCGCGCCCGCGCGGAGGCGGAGCGCGCGACCGCGTACGATGCGGTGTCGGC
GACCCTGGAGAGCCCGCAGTGGCGCGCGCTCATCATCGACTTCGCCGGCTGGGTCGAGGCGGGGTCATGGGCAGCCGGGC
CGGACGCGGCCGTCGACGGACGGCACTTCGCCGCGCAGGTCCTCGACAAGGCGCGGGCGCGCCTGAAGAAGCGCGGCCGC
GGCCTCCGGCACCTCGATCCGCACACGCGGCACCGGGCGCGGATCGCCGCCAAGAAGCTCCGATACGGCGCGGAGTTCTT
CGCCGGTCTCTACCGGAAGAAGAAGGCTGTCCGCCGGCAGGAGAAGTTCGGTGCCGCGCTCTCCGACCTGCAGGACCATC
TCGGCGCGCTCAACGATCTGGAGACGGCTCGGACGATGACCGAGAGCCTGTCGGGGCCGCCGATGCCGGGTCCGGACGAT
CCTGGGGCACAGAAATTGCTGGACGCGGCCGCGGACGCGCGGTCCGAGCTCCTCGACGTCAAGCCCTTCTGGCGCTGA

Upstream 100 bases:

>100_bases
TCACGCCCCGATGCCGGTGTCGCGCGGCGCGATATGGGAGCCGATGCAACCGGAGCCCATCCCTGCCTCGTTAGCGGTGG
CAGGCGACGAAGAGGAGCGT

Downstream 100 bases:

>100_bases
GGCTTTTCGCGCCGCCGGTCGGGCCGGAACCCGGCCGGTGCGGCGGCGTTCGCCGGACAACGATCGGCCCGTCCGGGGCA
GGGAGCGCGGATGGCCCACG

Product: CHAD domain-containing protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSDTDSNAGEEPREVELKFDCAGPDLTALASHPRLTDASATEPELLVTTYYDTPDRALREAGLTLRVRAKGGRHIQTVKA
GSGGVGLFDRAEWETEIAGETPEPAAWSDTAAEPVLRAADAPLERLFATVVMRREIPVIQGESRVLVTLDEGRVETASGD
APLCELELELQSGEPADLFALARELAETVPLRLGVKAKSAVGYALLDGKGPGVVKAEPVELPEGASAGEVFRRVARACLR
HMRLNETAFLEGGRPPEALHQIRVALRRLRSALSLFGPMLETDSRAAAFNDEIKRVTEPFGHARNLDVFLSDTLPDIAEQ
RPDEPGLDALRARAEAERATAYDAVSATLESPQWRALIIDFAGWVEAGSWAAGPDAAVDGRHFAAQVLDKARARLKKRGR
GLRHLDPHTRHRARIAAKKLRYGAEFFAGLYRKKKAVRRQEKFGAALSDLQDHLGALNDLETARTMTESLSGPPMPGPDD
PGAQKLLDAAADARSELLDVKPFWR

Sequences:

>Translated_505_residues
MSDTDSNAGEEPREVELKFDCAGPDLTALASHPRLTDASATEPELLVTTYYDTPDRALREAGLTLRVRAKGGRHIQTVKA
GSGGVGLFDRAEWETEIAGETPEPAAWSDTAAEPVLRAADAPLERLFATVVMRREIPVIQGESRVLVTLDEGRVETASGD
APLCELELELQSGEPADLFALARELAETVPLRLGVKAKSAVGYALLDGKGPGVVKAEPVELPEGASAGEVFRRVARACLR
HMRLNETAFLEGGRPPEALHQIRVALRRLRSALSLFGPMLETDSRAAAFNDEIKRVTEPFGHARNLDVFLSDTLPDIAEQ
RPDEPGLDALRARAEAERATAYDAVSATLESPQWRALIIDFAGWVEAGSWAAGPDAAVDGRHFAAQVLDKARARLKKRGR
GLRHLDPHTRHRARIAAKKLRYGAEFFAGLYRKKKAVRRQEKFGAALSDLQDHLGALNDLETARTMTESLSGPPMPGPDD
PGAQKLLDAAADARSELLDVKPFWR
>Mature_504_residues
SDTDSNAGEEPREVELKFDCAGPDLTALASHPRLTDASATEPELLVTTYYDTPDRALREAGLTLRVRAKGGRHIQTVKAG
SGGVGLFDRAEWETEIAGETPEPAAWSDTAAEPVLRAADAPLERLFATVVMRREIPVIQGESRVLVTLDEGRVETASGDA
PLCELELELQSGEPADLFALARELAETVPLRLGVKAKSAVGYALLDGKGPGVVKAEPVELPEGASAGEVFRRVARACLRH
MRLNETAFLEGGRPPEALHQIRVALRRLRSALSLFGPMLETDSRAAAFNDEIKRVTEPFGHARNLDVFLSDTLPDIAEQR
PDEPGLDALRARAEAERATAYDAVSATLESPQWRALIIDFAGWVEAGSWAAGPDAAVDGRHFAAQVLDKARARLKKRGRG
LRHLDPHTRHRARIAAKKLRYGAEFFAGLYRKKKAVRRQEKFGAALSDLQDHLGALNDLETARTMTESLSGPPMPGPDDP
GAQKLLDAAADARSELLDVKPFWR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=277, Percent_Identity=29.6028880866426, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 54906; Mature: 54774

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTDSNAGEEPREVELKFDCAGPDLTALASHPRLTDASATEPELLVTTYYDTPDRALRE
CCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
AGLTLRVRAKGGRHIQTVKAGSGGVGLFDRAEWETEIAGETPEPAAWSDTAAEPVLRAAD
CCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCC
APLERLFATVVMRREIPVIQGESRVLVTLDEGRVETASGDAPLCELELELQSGEPADLFA
CHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCEECCCCCCCEEEEEEEECCCCCHHHHH
LARELAETVPLRLGVKAKSAVGYALLDGKGPGVVKAEPVELPEGASAGEVFRRVARACLR
HHHHHHHHCCHHCCCCHHHHCCEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
HMRLNETAFLEGGRPPEALHQIRVALRRLRSALSLFGPMLETDSRAAAFNDEIKRVTEPF
HHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GHARNLDVFLSDTLPDIAEQRPDEPGLDALRARAEAERATAYDAVSATLESPQWRALIID
CCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
FAGWVEAGSWAAGPDAAVDGRHFAAQVLDKARARLKKRGRGLRHLDPHTRHRARIAAKKL
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
RYGAEFFAGLYRKKKAVRRQEKFGAALSDLQDHLGALNDLETARTMTESLSGPPMPGPDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGAQKLLDAAADARSELLDVKPFWR
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDTDSNAGEEPREVELKFDCAGPDLTALASHPRLTDASATEPELLVTTYYDTPDRALRE
CCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
AGLTLRVRAKGGRHIQTVKAGSGGVGLFDRAEWETEIAGETPEPAAWSDTAAEPVLRAAD
CCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCC
APLERLFATVVMRREIPVIQGESRVLVTLDEGRVETASGDAPLCELELELQSGEPADLFA
CHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCEECCCCCCCEEEEEEEECCCCCHHHHH
LARELAETVPLRLGVKAKSAVGYALLDGKGPGVVKAEPVELPEGASAGEVFRRVARACLR
HHHHHHHHCCHHCCCCHHHHCCEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
HMRLNETAFLEGGRPPEALHQIRVALRRLRSALSLFGPMLETDSRAAAFNDEIKRVTEPF
HHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GHARNLDVFLSDTLPDIAEQRPDEPGLDALRARAEAERATAYDAVSATLESPQWRALIID
CCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
FAGWVEAGSWAAGPDAAVDGRHFAAQVLDKARARLKKRGRGLRHLDPHTRHRARIAAKKL
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
RYGAEFFAGLYRKKKAVRRQEKFGAALSDLQDHLGALNDLETARTMTESLSGPPMPGPDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGAQKLLDAAADARSELLDVKPFWR
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]