| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749290
Identifier: 170749290
GI number: 170749290
Start: 3034703
End: 3035437
Strand: Reverse
Name: 170749290
Synonym: Mrad2831_2883
Alternate gene names: NA
Gene position: 3035437-3034703 (Counterclockwise)
Preceding gene: 170749295
Following gene: 170749287
Centisome position: 49.94
GC content: 72.52
Gene sequence:
>735_bases ATGGAATCGGCCGAACGCCCCTACGTGATCTGTCACATGACCTCGTCGGTCGACGGCCGGATCAAGGTGCGACGCTGGAA GACGCTGGACGCCGACAGCCATTACGAGCGCGTCCACGGCGAGTTGAAGGGCGATGCCTGGATGTGCGGGCGCGTCACCA TGCAGGGCTACGCCGACAGCGCCGATCCGCTGCCGGAGCCGGTCGCGGACGACGGCGTGCCGGTCCCGCGGGAGGACCAC GTCGCCCGCCGCGACGCGCCCGGCTACGCCGTGGCCCTCGACGCGCGGGGTCGCCTGGATTGGGGCGCGCGCGACGCGAT CGAGGGGGACCACGTCGTGGTGGTGCTCACCGAGTCCGTGCCGGATTCGCACCTGCGCGCGCTGCGGGCGGGCGGCCAGT CCTACCTGTTCGCGGGCGACCGGGCGGTCGACTTCCCCCTGGCGGCGGCGAAGCTGCGCGCCCTGTTCGGGATCGAGCGG CTCCTCGTCGAGGGCGGCGGCCACATCAACGGGTCGATGCTGAAGGCCGGGCTCATCGACGAGCTGAGCCTGCTCCTCGT GCCCGCGGTCGATGGCCTGAGCGGGACGCCGGCGGTGTTCGACATCGGCGGCGAGGAGGCGGACACGATGGGCAGCCGCC GCAAGCTCGACCTGACGGCCTGCGAGCGCCTGTCCGACGGCGTCGTGTGGCTCCGCTACCGGATCACGCCGGTCGAGCCG CCGGCAGGCGAATGA
Upstream 100 bases:
>100_bases GAAGCGCTGCGGCGTTCGATCCGCTGGGCCCGGCCGGCGCGCCGCCTAGTTTCGGCGTGGCCCGCGCGGGAGGCCCCGGC GCGCCGAGCGAGGAGCGCCC
Downstream 100 bases:
>100_bases TGCTCGCCAGGAACGCGTCGTAGCCGGCCGCGACCGCCTCCGGCCGCTCGAAATGCGGGAAGGCGCCGGTCGGCAGGGTG TCGACGCGCCAGTTGGGCCG
Product: deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain Protein; Pyrimidine Reductase; Riboflavin-Specific Deaminase; Bifunctional Deaminase-Reductase Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase Protein; Ribd Domain Protein; Pyrimidine Reductase Riboflavin Biosynthesis; 5-Amino-6-(5-Phosphoribosylamino) Uracil Reductase; Diaminohydroxyphosphoribosylaminopyrimidine Reductase; RibD-Family Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MESAERPYVICHMTSSVDGRIKVRRWKTLDADSHYERVHGELKGDAWMCGRVTMQGYADSADPLPEPVADDGVPVPREDH VARRDAPGYAVALDARGRLDWGARDAIEGDHVVVVLTESVPDSHLRALRAGGQSYLFAGDRAVDFPLAAAKLRALFGIER LLVEGGGHINGSMLKAGLIDELSLLLVPAVDGLSGTPAVFDIGGEEADTMGSRRKLDLTACERLSDGVVWLRYRITPVEP PAGE
Sequences:
>Translated_244_residues MESAERPYVICHMTSSVDGRIKVRRWKTLDADSHYERVHGELKGDAWMCGRVTMQGYADSADPLPEPVADDGVPVPREDH VARRDAPGYAVALDARGRLDWGARDAIEGDHVVVVLTESVPDSHLRALRAGGQSYLFAGDRAVDFPLAAAKLRALFGIER LLVEGGGHINGSMLKAGLIDELSLLLVPAVDGLSGTPAVFDIGGEEADTMGSRRKLDLTACERLSDGVVWLRYRITPVEP PAGE >Mature_244_residues MESAERPYVICHMTSSVDGRIKVRRWKTLDADSHYERVHGELKGDAWMCGRVTMQGYADSADPLPEPVADDGVPVPREDH VARRDAPGYAVALDARGRLDWGARDAIEGDHVVVVLTESVPDSHLRALRAGGQSYLFAGDRAVDFPLAAAKLRALFGIER LLVEGGGHINGSMLKAGLIDELSLLLVPAVDGLSGTPAVFDIGGEEADTMGSRRKLDLTACERLSDGVVWLRYRITPVEP PAGE
Specific function: Unknown
COG id: COG1985
COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26393; Mature: 26393
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESAERPYVICHMTSSVDGRIKVRRWKTLDADSHYERVHGELKGDAWMCGRVTMQGYADS CCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEEEEEEEEECCCCCC ADPLPEPVADDGVPVPREDHVARRDAPGYAVALDARGRLDWGARDAIEGDHVVVVLTESV CCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCC PDSHLRALRAGGQSYLFAGDRAVDFPLAAAKLRALFGIERLLVEGGGHINGSMLKAGLID CHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHH ELSLLLVPAVDGLSGTPAVFDIGGEEADTMGSRRKLDLTACERLSDGVVWLRYRITPVEP HHHEEEEECCCCCCCCCEEEECCCCCHHHCCCCCEECHHHHHHCCCCEEEEEEEEEECCC PAGE CCCC >Mature Secondary Structure MESAERPYVICHMTSSVDGRIKVRRWKTLDADSHYERVHGELKGDAWMCGRVTMQGYADS CCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEEEEEEEEECCCCCC ADPLPEPVADDGVPVPREDHVARRDAPGYAVALDARGRLDWGARDAIEGDHVVVVLTESV CCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCC PDSHLRALRAGGQSYLFAGDRAVDFPLAAAKLRALFGIERLLVEGGGHINGSMLKAGLID CHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHH ELSLLLVPAVDGLSGTPAVFDIGGEEADTMGSRRKLDLTACERLSDGVVWLRYRITPVEP HHHEEEEECCCCCCCCCEEEECCCCCHHHCCCCCEECHHHHHHCCCCEEEEEEEEEECCC PAGE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA