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The map label for this gene is pepF [H]

Identifier: 170749210

GI number: 170749210

Start: 2943364

End: 2945235

Strand: Reverse

Name: pepF [H]

Synonym: Mrad2831_2803

Alternate gene names: 170749210

Gene position: 2945235-2943364 (Counterclockwise)

Preceding gene: 170749214

Following gene: 170749209

Centisome position: 48.46

GC content: 69.18

Gene sequence:

>1872_bases
ATGATGCCGAGCCACACCGCCTCGCCGGTGACTGTCCGCCTGCCGGAGGGCGTGAGTGCCGCGCGCGCCGCCGCGAAGGC
TGCCGACCTCGGCCATCTTCCGGAATGGGACCTCACGGATCTCTATTCCGGCCTCGATGATCCGAACTTCTCCGGCGACA
TGACTCGCGCCGAGGAGGAGTGCCGCCGCTTCTCCGAGACCTATGCCGGCCGGATCGCCGAGCTCGCCGCCGGGCCGGAC
GCGTCCGCGCGTCTGGCCGAGGCGGTGCGGACCTACGAGGGCATCGAGGACCTGCTCGGCAAGCTCATGTCGTTCGCGGG
GCTCGTGTATTCCGGCGACACCACCGACGAGGCGCGGGCCAAGTTCTACGGCGACACCCGCGAGCGGCTGACCGGCGCCT
CGGCGGATCTCCTCTTCTTCGCCCTGGAGCTGAACCGCGTCGACGACGCCGCGATGAACGCCGCGATGGCCGGAGGGCCG
CTCGCGCACTACGCCCCGTGGATCGAGGACCTGCGGCGCGAGAAGCCGCACCAGCTCGACGACCGCACCGAGAAGCTGTT
TCTCGAGAAGTCGGTCACGTCGAACGCCGCCTGGGACCGGCTGTTCAACGAGACGATCGCCTCGCTGCGCTTCACCGTGC
AGGGCGAGGAGATGCCGCTGGAGCCGACGCTCAACAAGCTTCAGGATCCGGACGGCGCGGTCCGCAAGGAGGCGGCCGGC
GCGATCAGCGCGGTGCTGCGCGGCCAGCTGCGGGTCTTCACGCTCATCACCAACACGCTGGCGAAGGACAAAGAGATCAG
CGACCGCTGGCGCGGGTTCAAGGACGTGGCCGACGCGCGCCACCTGTCGAATCGGGTCGAGCCCGAGGTGGTGGAAGCGC
TCGTCGACGCGGTGCGGGCGGCCTATCCCCGGCTGTCCCACCGCTACTACACGCTCAAAGCGAAGTGGTTCGGGCAGGAG
GCGCTGCCCTACTGGGACCGCAACGCGCCGCTGCCGCGCGTCGAGCAGCGCACGATCCCGTGGACGGAGGCCCGCGACAC
GGTGCTGTCCGCCTACGACGCGTTCTCGCCGAAGATGGCGGGGATCGCGCGGCGCTTCTTCGACGAGCGCTGGATCGACG
CGCCGACCCGTCCGGGCAAGGCGCCGGGCGCCTTCGCGCATCCGACCGTGCCCTCCGTCCACCCCTACGTGCTGGTCAAC
TACCAGGGCAAGCCGCGGGACGTGATGACGCTGGCGCACGAGCTCGGCCACGGCGTCCACCAGGTGCTCGCCGGGCCGAA
CGGCGCCCTGATGGCGCCGACACCCCTGACCCTCGCCGAGACGGCGAGCGTGTTCGGCGAGATGCTGACCTTCCGTCGGC
TCCTCGCCGCGACCACCGACACGACCCAGCGCCGGGCCATGCTCGCCGCCAAGGTCGAGGACATGATCAACACGGTGGTG
CGCCAGATCGCGTTCTACTCATTCGAGCGGAAGGTCCATCTCGCCCGCGCCAAGGGCGAGCTGACCACCGACCAGATCAA
CGCGCTGTGGCTGTCCGTCCAGGCGGAATCGCTCGGTCCGGCGATCACGCTGGATTCAGGCTACGAGCCGTTCTGGGCCT
ACATCCCGCATTTCATCCACTCCCCGTTCTACGTCTACGCCTACGCGTTCGGCGACTGCCTGGTGAACTCGCTCTACGGC
GTCTACGCCCGGGCGGAGGAAGGCTTCGTGGACCGCTACTTCGCGCTGCTCTCGGCCGGCGGCTCGAAGCCCTACGGCGA
GCTGCTCGCGCCCTTCGGCCTCGACGCCAAGGATCCGGGCTTCTGGCAGATCGGTCTCGGGATGATCGAGAGCATGATCG
TCGAGCTGGAGAGCATGGAAGGTCGGGCCTGA

Upstream 100 bases:

>100_bases
CCGATCGCGCGCCGGTCCGACGGACCGCCCGCGTTGAACGCGTGGCGGCACGCTCGATATCAGGGTACGGGGCCGGAGCC
CTTGGAGAGGATTGCACACC

Downstream 100 bases:

>100_bases
GCGGGGCGCCGCGGGCTCGGCCGATGCCCGCGGCGCAGGGACCCACGCCCCTGGTTCGCGGCCGGGGGCGGCTTATCTGC
GGATCATCGTCAGACGAGCA

Product: pepF/M3 family oligoendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MMPSHTASPVTVRLPEGVSAARAAAKAADLGHLPEWDLTDLYSGLDDPNFSGDMTRAEEECRRFSETYAGRIAELAAGPD
ASARLAEAVRTYEGIEDLLGKLMSFAGLVYSGDTTDEARAKFYGDTRERLTGASADLLFFALELNRVDDAAMNAAMAGGP
LAHYAPWIEDLRREKPHQLDDRTEKLFLEKSVTSNAAWDRLFNETIASLRFTVQGEEMPLEPTLNKLQDPDGAVRKEAAG
AISAVLRGQLRVFTLITNTLAKDKEISDRWRGFKDVADARHLSNRVEPEVVEALVDAVRAAYPRLSHRYYTLKAKWFGQE
ALPYWDRNAPLPRVEQRTIPWTEARDTVLSAYDAFSPKMAGIARRFFDERWIDAPTRPGKAPGAFAHPTVPSVHPYVLVN
YQGKPRDVMTLAHELGHGVHQVLAGPNGALMAPTPLTLAETASVFGEMLTFRRLLAATTDTTQRRAMLAAKVEDMINTVV
RQIAFYSFERKVHLARAKGELTTDQINALWLSVQAESLGPAITLDSGYEPFWAYIPHFIHSPFYVYAYAFGDCLVNSLYG
VYARAEEGFVDRYFALLSAGGSKPYGELLAPFGLDAKDPGFWQIGLGMIESMIVELESMEGRA

Sequences:

>Translated_623_residues
MMPSHTASPVTVRLPEGVSAARAAAKAADLGHLPEWDLTDLYSGLDDPNFSGDMTRAEEECRRFSETYAGRIAELAAGPD
ASARLAEAVRTYEGIEDLLGKLMSFAGLVYSGDTTDEARAKFYGDTRERLTGASADLLFFALELNRVDDAAMNAAMAGGP
LAHYAPWIEDLRREKPHQLDDRTEKLFLEKSVTSNAAWDRLFNETIASLRFTVQGEEMPLEPTLNKLQDPDGAVRKEAAG
AISAVLRGQLRVFTLITNTLAKDKEISDRWRGFKDVADARHLSNRVEPEVVEALVDAVRAAYPRLSHRYYTLKAKWFGQE
ALPYWDRNAPLPRVEQRTIPWTEARDTVLSAYDAFSPKMAGIARRFFDERWIDAPTRPGKAPGAFAHPTVPSVHPYVLVN
YQGKPRDVMTLAHELGHGVHQVLAGPNGALMAPTPLTLAETASVFGEMLTFRRLLAATTDTTQRRAMLAAKVEDMINTVV
RQIAFYSFERKVHLARAKGELTTDQINALWLSVQAESLGPAITLDSGYEPFWAYIPHFIHSPFYVYAYAFGDCLVNSLYG
VYARAEEGFVDRYFALLSAGGSKPYGELLAPFGLDAKDPGFWQIGLGMIESMIVELESMEGRA
>Mature_623_residues
MMPSHTASPVTVRLPEGVSAARAAAKAADLGHLPEWDLTDLYSGLDDPNFSGDMTRAEEECRRFSETYAGRIAELAAGPD
ASARLAEAVRTYEGIEDLLGKLMSFAGLVYSGDTTDEARAKFYGDTRERLTGASADLLFFALELNRVDDAAMNAAMAGGP
LAHYAPWIEDLRREKPHQLDDRTEKLFLEKSVTSNAAWDRLFNETIASLRFTVQGEEMPLEPTLNKLQDPDGAVRKEAAG
AISAVLRGQLRVFTLITNTLAKDKEISDRWRGFKDVADARHLSNRVEPEVVEALVDAVRAAYPRLSHRYYTLKAKWFGQE
ALPYWDRNAPLPRVEQRTIPWTEARDTVLSAYDAFSPKMAGIARRFFDERWIDAPTRPGKAPGAFAHPTVPSVHPYVLVN
YQGKPRDVMTLAHELGHGVHQVLAGPNGALMAPTPLTLAETASVFGEMLTFRRLLAATTDTTQRRAMLAAKVEDMINTVV
RQIAFYSFERKVHLARAKGELTTDQINALWLSVQAESLGPAITLDSGYEPFWAYIPHFIHSPFYVYAYAFGDCLVNSLYG
VYARAEEGFVDRYFALLSAGGSKPYGELLAPFGLDAKDPGFWQIGLGMIESMIVELESMEGRA

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69025; Mature: 69025

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPSHTASPVTVRLPEGVSAARAAAKAADLGHLPEWDLTDLYSGLDDPNFSGDMTRAEEE
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHH
CRRFSETYAGRIAELAAGPDASARLAEAVRTYEGIEDLLGKLMSFAGLVYSGDTTDEARA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHH
KFYGDTRERLTGASADLLFFALELNRVDDAAMNAAMAGGPLAHYAPWIEDLRREKPHQLD
HHCCCHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
DRTEKLFLEKSVTSNAAWDRLFNETIASLRFTVQGEEMPLEPTLNKLQDPDGAVRKEAAG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHCCCCCHHHHHHHHH
AISAVLRGQLRVFTLITNTLAKDKEISDRWRGFKDVADARHLSNRVEPEVVEALVDAVRA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AYPRLSHRYYTLKAKWFGQEALPYWDRNAPLPRVEQRTIPWTEARDTVLSAYDAFSPKMA
HHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
GIARRFFDERWIDAPTRPGKAPGAFAHPTVPSVHPYVLVNYQGKPRDVMTLAHELGHGVH
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
QVLAGPNGALMAPTPLTLAETASVFGEMLTFRRLLAATTDTTQRRAMLAAKVEDMINTVV
HHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RQIAFYSFERKVHLARAKGELTTDQINALWLSVQAESLGPAITLDSGYEPFWAYIPHFIH
HHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHCCCEEEECCCCCHHHHHHHHHHC
SPFYVYAYAFGDCLVNSLYGVYARAEEGFVDRYFALLSAGGSKPYGELLAPFGLDAKDPG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC
FWQIGLGMIESMIVELESMEGRA
EEHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMPSHTASPVTVRLPEGVSAARAAAKAADLGHLPEWDLTDLYSGLDDPNFSGDMTRAEEE
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHH
CRRFSETYAGRIAELAAGPDASARLAEAVRTYEGIEDLLGKLMSFAGLVYSGDTTDEARA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHH
KFYGDTRERLTGASADLLFFALELNRVDDAAMNAAMAGGPLAHYAPWIEDLRREKPHQLD
HHCCCHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
DRTEKLFLEKSVTSNAAWDRLFNETIASLRFTVQGEEMPLEPTLNKLQDPDGAVRKEAAG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHCCCCCHHHHHHHHH
AISAVLRGQLRVFTLITNTLAKDKEISDRWRGFKDVADARHLSNRVEPEVVEALVDAVRA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AYPRLSHRYYTLKAKWFGQEALPYWDRNAPLPRVEQRTIPWTEARDTVLSAYDAFSPKMA
HHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
GIARRFFDERWIDAPTRPGKAPGAFAHPTVPSVHPYVLVNYQGKPRDVMTLAHELGHGVH
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
QVLAGPNGALMAPTPLTLAETASVFGEMLTFRRLLAATTDTTQRRAMLAAKVEDMINTVV
HHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RQIAFYSFERKVHLARAKGELTTDQINALWLSVQAESLGPAITLDSGYEPFWAYIPHFIH
HHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHCCCEEEECCCCCHHHHHHHHHHC
SPFYVYAYAFGDCLVNSLYGVYARAEEGFVDRYFALLSAGGSKPYGELLAPFGLDAKDPG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCC
FWQIGLGMIESMIVELESMEGRA
EEHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]