| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ubiB [C]
Identifier: 170749209
GI number: 170749209
Start: 2941893
End: 2943254
Strand: Reverse
Name: ubiB [C]
Synonym: Mrad2831_2802
Alternate gene names: 170749209
Gene position: 2943254-2941893 (Counterclockwise)
Preceding gene: 170749210
Following gene: 170749208
Centisome position: 48.43
GC content: 68.43
Gene sequence:
>1362_bases ATGGCCGAGACCGACCGCGAAGCCAACCGCTTCTCCGCCCGCGCCGGGCGCTACGCCAGCGTGGGCGCCAATGTCGGCGG CGTCGCCGCCCGGATGGCCATGGCGCGGCTGTTCGGAAAGGAGGGCACCACCAACGCCGCCGCCCTGGCGCAGGCGCTGG GCGGCCTGAAGGGGCCGATCATGAAGGTGGCCCAGCTGCTGGCCACCGTCCCGGACCTGCTCCCGCCGGAGTACGCCACC GAGTTGCAGAAGCTCCAGGCCGACGCGCCGCCGATGGGCGCGGCCTTCGTCCGACGCCGGATGCAGTCGGAATTGGGCGC CGGCTGGCAGGCGCGATTCGGGAGCTTCGACCTCAAGCCCGCGGCCGCGGCCTCGCTGGGGCAGGTCCACCGCGCGACTA CCGAGGACGGCGAGCGGCTCGCCTGCAAGCTGCAATATCCGGACATGCAATCGGCCGTGGAGGCCGACCTCAAGCAGCTG GAGGTCGCATTCGCGCTGCACCGCCGGATGAACACGTGGCTCGATACGCGCGAGATCGCGAAGGAGATCGGCGCCCGGGT GCGCGAGGAACTCGACTACGAGCGCGAGGCCAAGCACGCGGCGCTCTACGGGGCCGTGCTGAAGGACATCGCCGCAGTGC GCGTGCCGCGCGTCTTCCCTGAGCTCTCGACGAAGCGCCTGCTCACGCTCGGCTGGCTCGACGGAGACAAGATCCTGGGC TTCGCCGACGAGCCCGTCGAGGTGCGTAACCGGATCGCTCAGGCGATGTTCAAGGCGTGGTGGCACCCGTTCAGCCGGGC GGCGGTGATCCACGGCGACCCGCATCTCGGCAATTACACGGTCTTCTCTGACGCCGGAGAGGCCGCCGGGATCAACCTGC TGGATTACGGCTGCGTCCGGATCTTCCATCCGCGATTCGTCGGCGGCGTCGTGGACCTCTATCGCGGCCTGCTGGAGAAC GACGACGCCCGCATCGTCCACGCCTACGAGGTCTGGGGTTTCAAGGATCTCGACAAGGAGAAGATCGAGATCCTGAACAT CTGGGCCCGCTTCATCTACGGGCCGCTGCTCGAGGACCGCACCCGCACCGTCGCGGACGGGGTGAAGCCAGGGGAGTACG GTCGGCGGCAGGCCTTCCAGGTCCATCAGGCCCTGAAGGAGCGGGGACCCGTGACGGTGCCGCAGGAATTCGTCTTCATG GATCGTGCCGCCGTGGGTCTGGGCGCCGTGTTCCTCCACCTCAGGTCGGAACTCAACTACCACCGGTTGTTCGAAGCCGA GATCGAGCATTTCTCGCTGGACGAACTCACGAAGCGTCAGGGTCGGGTGCTCGCCGAGGCGGACCTGCCGAAACCGGCCT GA
Upstream 100 bases:
>100_bases CGCGGGCTCGGCCGATGCCCGCGGCGCAGGGACCCACGCCCCTGGTTCGCGGCCGGGGGCGGCTTATCTGCGGATCATCG TCAGACGAGCAGATCGAGTG
Downstream 100 bases:
>100_bases GTCGGCGCGAAGATCCACCGAGAGAGCGATCAACTTGCGTGCGTCCGATTGCGGCAGGTAAACGCTTGAGCTACATCCGA CCGCGACCGCAAGAAGTCGC
Product: hypothetical protein
Products: 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MAETDREANRFSARAGRYASVGANVGGVAARMAMARLFGKEGTTNAAALAQALGGLKGPIMKVAQLLATVPDLLPPEYAT ELQKLQADAPPMGAAFVRRRMQSELGAGWQARFGSFDLKPAAAASLGQVHRATTEDGERLACKLQYPDMQSAVEADLKQL EVAFALHRRMNTWLDTREIAKEIGARVREELDYEREAKHAALYGAVLKDIAAVRVPRVFPELSTKRLLTLGWLDGDKILG FADEPVEVRNRIAQAMFKAWWHPFSRAAVIHGDPHLGNYTVFSDAGEAAGINLLDYGCVRIFHPRFVGGVVDLYRGLLEN DDARIVHAYEVWGFKDLDKEKIEILNIWARFIYGPLLEDRTRTVADGVKPGEYGRRQAFQVHQALKERGPVTVPQEFVFM DRAAVGLGAVFLHLRSELNYHRLFEAEIEHFSLDELTKRQGRVLAEADLPKPA
Sequences:
>Translated_453_residues MAETDREANRFSARAGRYASVGANVGGVAARMAMARLFGKEGTTNAAALAQALGGLKGPIMKVAQLLATVPDLLPPEYAT ELQKLQADAPPMGAAFVRRRMQSELGAGWQARFGSFDLKPAAAASLGQVHRATTEDGERLACKLQYPDMQSAVEADLKQL EVAFALHRRMNTWLDTREIAKEIGARVREELDYEREAKHAALYGAVLKDIAAVRVPRVFPELSTKRLLTLGWLDGDKILG FADEPVEVRNRIAQAMFKAWWHPFSRAAVIHGDPHLGNYTVFSDAGEAAGINLLDYGCVRIFHPRFVGGVVDLYRGLLEN DDARIVHAYEVWGFKDLDKEKIEILNIWARFIYGPLLEDRTRTVADGVKPGEYGRRQAFQVHQALKERGPVTVPQEFVFM DRAAVGLGAVFLHLRSELNYHRLFEAEIEHFSLDELTKRQGRVLAEADLPKPA >Mature_452_residues AETDREANRFSARAGRYASVGANVGGVAARMAMARLFGKEGTTNAAALAQALGGLKGPIMKVAQLLATVPDLLPPEYATE LQKLQADAPPMGAAFVRRRMQSELGAGWQARFGSFDLKPAAAASLGQVHRATTEDGERLACKLQYPDMQSAVEADLKQLE VAFALHRRMNTWLDTREIAKEIGARVREELDYEREAKHAALYGAVLKDIAAVRVPRVFPELSTKRLLTLGWLDGDKILGF ADEPVEVRNRIAQAMFKAWWHPFSRAAVIHGDPHLGNYTVFSDAGEAAGINLLDYGCVRIFHPRFVGGVVDLYRGLLEND DARIVHAYEVWGFKDLDKEKIEILNIWARFIYGPLLEDRTRTVADGVKPGEYGRRQAFQVHQALKERGPVTVPQEFVFMD RAAVGLGAVFLHLRSELNYHRLFEAEIEHFSLDELTKRQGRVLAEADLPKPA
Specific function: Required, Probably Indirectly, For The Hydroxylation Of 2-Octaprenylphenol To 2-Octaprenyl-6-Hydroxy-Phenol, The Fourth Step In Ubiquinone Biosynthesis. Specific For Aerobically Grown Log-Phase Cells. [C]
COG id: COG0661
COG function: function code R; Predicted unusual protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protein kinase superfamily. ADCK protein kinase family [H]
Homologues:
Organism=Homo sapiens, GI40254938, Length=308, Percent_Identity=27.9220779220779, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI41393593, Length=285, Percent_Identity=30.1754385964912, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI27363457, Length=394, Percent_Identity=24.3654822335025, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI34147522, Length=314, Percent_Identity=24.5222929936306, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI217416386, Length=339, Percent_Identity=24.7787610619469, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI217035081, Length=231, Percent_Identity=28.1385281385281, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI2367309, Length=257, Percent_Identity=25.6809338521401, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI32565180, Length=350, Percent_Identity=26.5714285714286, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17559152, Length=251, Percent_Identity=28.2868525896414, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321319, Length=316, Percent_Identity=28.7974683544304, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323282, Length=316, Percent_Identity=25, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI18859849, Length=315, Percent_Identity=26.3492063492064, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI22024280, Length=301, Percent_Identity=27.5747508305648, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24662575, Length=288, Percent_Identity=28.8194444444444, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004147 - InterPro: IPR011009 - InterPro: IPR000719 [H]
Pfam domain/function: PF03109 ABC1 [H]
EC number: NA
Molecular weight: Translated: 50341; Mature: 50210
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETDREANRFSARAGRYASVGANVGGVAARMAMARLFGKEGTTNAAALAQALGGLKGPI CCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHH MKVAQLLATVPDLLPPEYATELQKLQADAPPMGAAFVRRRMQSELGAGWQARFGSFDLKP HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCH AAAASLGQVHRATTEDGERLACKLQYPDMQSAVEADLKQLEVAFALHRRMNTWLDTREIA HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEIGARVREELDYEREAKHAALYGAVLKDIAAVRVPRVFPELSTKRLLTLGWLDGDKILG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEC FADEPVEVRNRIAQAMFKAWWHPFSRAAVIHGDPHLGNYTVFSDAGEAAGINLLDYGCVR CCCCCHHHHHHHHHHHHHHHCCHHHCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHH IFHPRFVGGVVDLYRGLLENDDARIVHAYEVWGFKDLDKEKIEILNIWARFIYGPLLEDR HHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TRTVADGVKPGEYGRRQAFQVHQALKERGPVTVPQEFVFMDRAAVGLGAVFLHLRSELNY HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH HRLFEAEIEHFSLDELTKRQGRVLAEADLPKPA HHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCC >Mature Secondary Structure AETDREANRFSARAGRYASVGANVGGVAARMAMARLFGKEGTTNAAALAQALGGLKGPI CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHH MKVAQLLATVPDLLPPEYATELQKLQADAPPMGAAFVRRRMQSELGAGWQARFGSFDLKP HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCH AAAASLGQVHRATTEDGERLACKLQYPDMQSAVEADLKQLEVAFALHRRMNTWLDTREIA HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEIGARVREELDYEREAKHAALYGAVLKDIAAVRVPRVFPELSTKRLLTLGWLDGDKILG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEC FADEPVEVRNRIAQAMFKAWWHPFSRAAVIHGDPHLGNYTVFSDAGEAAGINLLDYGCVR CCCCCHHHHHHHHHHHHHHHCCHHHCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHH IFHPRFVGGVVDLYRGLLENDDARIVHAYEVWGFKDLDKEKIEILNIWARFIYGPLLEDR HHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TRTVADGVKPGEYGRRQAFQVHQALKERGPVTVPQEFVFMDRAAVGLGAVFLHLRSELNY HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH HRLFEAEIEHFSLDELTKRQGRVLAEADLPKPA HHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 2-octaprenylphenol; O2 [C]
Specific reaction: 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]