Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 170749183

GI number: 170749183

Start: 2914184

End: 2914921

Strand: Reverse

Name: ssuC [H]

Synonym: Mrad2831_2776

Alternate gene names: 170749183

Gene position: 2914921-2914184 (Counterclockwise)

Preceding gene: 170749184

Following gene: 170749182

Centisome position: 47.96

GC content: 70.05

Gene sequence:

>738_bases
ATGGGCGCGCTGACCCGCATCGCGTCCCTGGCCGTGCTCCTCGCCGCCTGGCAGATCGCCGCGCTCGAGGCGGGCTCGCG
CCTGCTGCCGGCGCCCCTGGCGGTGCTGCGCTTCATCGTTCAGGAGGCGGAGCGCGGCGATCTCGCCCACAACGTGGGCA
TGACGCTGCTCCGCGTGGCGATCTCCTTCACCGTGGCGATGATCCTCGGCGTCGTCCTCGGCGTGGCGCTCGGACGGTCC
AAGGCCGCCGACCTCATCCTCGACACGCCGCTGCTCGTCCTCCTCAACACGCCGGCCCTGGTGATCACGGTCCTGGCCTA
CGTCTGGGTGGGGCTCACCGAGACCGCCGCGATCCTGGCGGTGGTGCTCAACAAGCTCCCGAACGTCGCGGTGATCGTGC
GCGAGGGGGCGCGGAACCTCGATCCCGGGCTCGACGAGATGGCCCGCGCCTACCGGCTCGACCGGCGCAGCTGGGCCCTC
GACATCCTGATCCCGCAGCTCCAGCCCTACATGGTGACGGCGGCGCGGTCGGGCCTGTCGCTCGCCTGGAAGATCGTGCT
GGTGGTGGAGCTGCTCGGGCGCCCGGACGGGGTCGGCTTCGCGATCAACTACTACTTCGTCCAGAGCACCGACGTGGCGG
CGATCATCGGCTACAGCCTCGTCTTCATGGCCGTGATGATCGGCATCGACGTCCTCCTGCTGCAGCGGCTCGAAGCCTAT
GTCCGTCGCTGGCGCTGA

Upstream 100 bases:

>100_bases
GGGCGACGCGCTCCCGCCGGACCTCTACTACACCGGCCGCAATGGTTGAGGCCCCCGTCCGGCGGGCGCGCGCGGCGGCC
GTCCCGAGCACCGGGACCGC

Downstream 100 bases:

>100_bases
GCCCGTCCTCCAGGTCGCGATCGCGTCGAAATGGTACCGGCCCGCCCGGGCCGAGCCGGTCGAGGCCGTTCGGAACCTCA
CCTTCGGCGTCGCCGCCGGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MGALTRIASLAVLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVAISFTVAMILGVVLGVALGRS
KAADLILDTPLLVLLNTPALVITVLAYVWVGLTETAAILAVVLNKLPNVAVIVREGARNLDPGLDEMARAYRLDRRSWAL
DILIPQLQPYMVTAARSGLSLAWKIVLVVELLGRPDGVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQRLEAY
VRRWR

Sequences:

>Translated_245_residues
MGALTRIASLAVLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVAISFTVAMILGVVLGVALGRS
KAADLILDTPLLVLLNTPALVITVLAYVWVGLTETAAILAVVLNKLPNVAVIVREGARNLDPGLDEMARAYRLDRRSWAL
DILIPQLQPYMVTAARSGLSLAWKIVLVVELLGRPDGVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQRLEAY
VRRWR
>Mature_244_residues
GALTRIASLAVLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVAISFTVAMILGVVLGVALGRSK
AADLILDTPLLVLLNTPALVITVLAYVWVGLTETAAILAVVLNKLPNVAVIVREGARNLDPGLDEMARAYRLDRRSWALD
ILIPQLQPYMVTAARSGLSLAWKIVLVVELLGRPDGVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQRLEAYV
RRWR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=230, Percent_Identity=31.304347826087, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786564, Length=204, Percent_Identity=27.4509803921569, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26549; Mature: 26418

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALTRIASLAVLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ISFTVAMILGVVLGVALGRSKAADLILDTPLLVLLNTPALVITVLAYVWVGLTETAAILA
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VVLNKLPNVAVIVREGARNLDPGLDEMARAYRLDRRSWALDILIPQLQPYMVTAARSGLS
HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
LAWKIVLVVELLGRPDGVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQRLEAY
HHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRWR
HHHCC
>Mature Secondary Structure 
GALTRIASLAVLLAAWQIAALEAGSRLLPAPLAVLRFIVQEAERGDLAHNVGMTLLRVA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ISFTVAMILGVVLGVALGRSKAADLILDTPLLVLLNTPALVITVLAYVWVGLTETAAILA
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VVLNKLPNVAVIVREGARNLDPGLDEMARAYRLDRRSWALDILIPQLQPYMVTAARSGLS
HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
LAWKIVLVVELLGRPDGVGFAINYYFVQSTDVAAIIGYSLVFMAVMIGIDVLLLQRLEAY
HHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRWR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]