BacMap

Definition	Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession	NC_010505
Length	6,077,833

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The map label for this gene is ssuB1 [H]

Identifier: 170749182

GI number: 170749182

Start: 2913469

End: 2914203

Strand: Reverse

Name: ssuB1 [H]

Synonym: Mrad2831_2775

Alternate gene names: 170749182

Gene position: 2914203-2913469 (Counterclockwise)

Preceding gene: 170749183

Following gene: 170749181

Centisome position: 47.95

GC content: 74.97

Gene sequence:

>735_bases
ATGTCCGTCGCTGGCGCTGAGCCCGTCCTCCAGGTCGCGATCGCGTCGAAATGGTACCGGCCCGCCCGGGCCGAGCCGGT
CGAGGCCGTTCGGAACCTCACCTTCGGCGTCGCCGCCGGGGAGATCGTCTGCCTGATCGGGCCGTCGGGCGCCGGGAAGA
CCACCACCCTGCGGATCCTGCTCGGGCTCGACACCGCGTTCGAGGGCCGCGTCTCCGGCGCGGACCGGGCGGGCATCGTG
TTCCAGGAGCCGCGGCTGCTGCCCTGGCGCAGCGTCGAGCACAATGTCCGCCTCGGCCTGCCCCGGGCGCGGCGGAACCG
CGATCTCGACGACCTGTTCGCGCGGCTCGGCCTGACGGCGTGGCGGACGCGCTACCCGAAGGCCCTGTCGCTGGGGATGC
AGCGGCGCGTGGCTCTGGCGCGCGCGCTGGCCGACGGGCCGCGGGTCCTCGTGCTCGACGAGCCGTTCGTGTCCCTCGAC
GACGCCGCCGCCGCCGAGCTGCGCGGTCTCGTGGTGGACACGGTGGACCGGGCCGGCATGAGCGTCCTGATGGTCACGCA
CAACGTCGCCGAGGCGATCGGGATCGCCGACCGCCTGCTGCTGGTCTCGCGGCGCCCGGCGAGCCTCATCGCCGACGTGC
GCCTCGACCGGCCGCGCCGCGACCGCGACCGCGCCTGGGCCGAGACGACCCGGGCGAACCTCGCCGCGCGGCATCCCGAG
ATCATCGCGCAGTGA

Upstream 100 bases:

>100_bases
GTCCAGAGCACCGACGTGGCGGCGATCATCGGCTACAGCCTCGTCTTCATGGCCGTGATGATCGGCATCGACGTCCTCCT
GCTGCAGCGGCTCGAAGCCT

Downstream 100 bases:

>100_bases
GGCGTGCTGCGCCGGTCGTTCGGACGAACCCGCGCGTCCGGATCGCGCGCTGAGGTCCGGGCGCCACCGGAACCGAAGGA
CCATCCGACTTCGGCCCCGA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSVAGAEPVLQVAIASKWYRPARAEPVEAVRNLTFGVAAGEIVCLIGPSGAGKTTTLRILLGLDTAFEGRVSGADRAGIV
FQEPRLLPWRSVEHNVRLGLPRARRNRDLDDLFARLGLTAWRTRYPKALSLGMQRRVALARALADGPRVLVLDEPFVSLD
DAAAAELRGLVVDTVDRAGMSVLMVTHNVAEAIGIADRLLLVSRRPASLIADVRLDRPRRDRDRAWAETTRANLAARHPE
IIAQ

Sequences:

>Translated_244_residues
MSVAGAEPVLQVAIASKWYRPARAEPVEAVRNLTFGVAAGEIVCLIGPSGAGKTTTLRILLGLDTAFEGRVSGADRAGIV
FQEPRLLPWRSVEHNVRLGLPRARRNRDLDDLFARLGLTAWRTRYPKALSLGMQRRVALARALADGPRVLVLDEPFVSLD
DAAAAELRGLVVDTVDRAGMSVLMVTHNVAEAIGIADRLLLVSRRPASLIADVRLDRPRRDRDRAWAETTRANLAARHPE
IIAQ
>Mature_243_residues
SVAGAEPVLQVAIASKWYRPARAEPVEAVRNLTFGVAAGEIVCLIGPSGAGKTTTLRILLGLDTAFEGRVSGADRAGIVF
QEPRLLPWRSVEHNVRLGLPRARRNRDLDDLFARLGLTAWRTRYPKALSLGMQRRVALARALADGPRVLVLDEPFVSLDD
AAAAELRGLVVDTVDRAGMSVLMVTHNVAEAIGIADRLLLVSRRPASLIADVRLDRPRRDRDRAWAETTRANLAARHPEI
IAQ

Specific function: Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system [H]

COG id: COG1116

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27436953, Length=189, Percent_Identity=29.6296296296296, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI27262624, Length=214, Percent_Identity=28.9719626168224, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27262626, Length=214, Percent_Identity=28.9719626168224, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI153792144, Length=242, Percent_Identity=24.7933884297521, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI27881501, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI30795238, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI45446740, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI47078218, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI150417984, Length=197, Percent_Identity=30.4568527918782, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI27477115, Length=191, Percent_Identity=28.7958115183246, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI6005701, Length=191, Percent_Identity=28.7958115183246, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI21536376, Length=193, Percent_Identity=29.0155440414508, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI31657092, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1787164, Length=221, Percent_Identity=39.3665158371041, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=34.4660194174757, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=32.3943661971831, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1788761, Length=198, Percent_Identity=35.3535353535354, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1787029, Length=200, Percent_Identity=33.5, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787105, Length=203, Percent_Identity=35.9605911330049, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87081709, Length=191, Percent_Identity=33.5078534031414, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1789672, Length=237, Percent_Identity=30.379746835443, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790467, Length=188, Percent_Identity=32.9787234042553, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787370, Length=211, Percent_Identity=30.8056872037915, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=32.5471698113208, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1788450, Length=196, Percent_Identity=35.2040816326531, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788225, Length=198, Percent_Identity=33.8383838383838, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787712, Length=189, Percent_Identity=31.7460317460317, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786253, Length=187, Percent_Identity=34.2245989304813, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789032, Length=223, Percent_Identity=30.9417040358744, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787089, Length=202, Percent_Identity=31.6831683168317, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787758, Length=188, Percent_Identity=30.3191489361702, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082267, Length=193, Percent_Identity=31.6062176165803, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786872, Length=208, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1789873, Length=195, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1788053, Length=179, Percent_Identity=36.8715083798883, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786319, Length=200, Percent_Identity=30.5, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1789593, Length=195, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=31.8627450980392, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789864, Length=211, Percent_Identity=31.2796208530806, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI48995001, Length=222, Percent_Identity=31.5315315315315, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=32.0388349514563, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787547, Length=224, Percent_Identity=27.2321428571429, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788506, Length=185, Percent_Identity=30.8108108108108, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789962, Length=227, Percent_Identity=27.7533039647577, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789963, Length=210, Percent_Identity=27.6190476190476, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI87081782, Length=193, Percent_Identity=31.6062176165803, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI87082268, Length=200, Percent_Identity=30.5, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994883, Length=208, Percent_Identity=27.4038461538462, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790544, Length=233, Percent_Identity=29.1845493562232, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787500, Length=229, Percent_Identity=24.8908296943231, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789991, Length=201, Percent_Identity=28.3582089552239, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790162, Length=201, Percent_Identity=27.363184079602, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790190, Length=218, Percent_Identity=27.5229357798165, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787792, Length=188, Percent_Identity=28.1914893617021, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788210, Length=195, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693107, Length=200, Percent_Identity=30.5, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994943, Length=181, Percent_Identity=29.8342541436464, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787759, Length=250, Percent_Identity=26.8, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788165, Length=176, Percent_Identity=31.25, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786981, Length=183, Percent_Identity=32.7868852459016, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787772, Length=164, Percent_Identity=31.7073170731707, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788897, Length=215, Percent_Identity=31.6279069767442, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789891, Length=185, Percent_Identity=28.6486486486486, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=194, Percent_Identity=29.3814432989691, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=209, Percent_Identity=29.6650717703349, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25146777, Length=241, Percent_Identity=26.5560165975104, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17510237, Length=199, Percent_Identity=28.1407035175879, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=184, Percent_Identity=29.8913043478261, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=233, Percent_Identity=28.755364806867, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=203, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=207, Percent_Identity=26.5700483091787, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=194, Percent_Identity=25.7731958762887, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=194, Percent_Identity=28.8659793814433, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24581191, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581189, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581193, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581195, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28574150, Length=186, Percent_Identity=28.494623655914, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI116007328, Length=186, Percent_Identity=28.494623655914, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI85726357, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571209, Length=195, Percent_Identity=27.1794871794872, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24582014, Length=192, Percent_Identity=29.6875, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=192, Percent_Identity=29.6875, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017875
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26642; Mature: 26511

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAGAEPVLQVAIASKWYRPARAEPVEAVRNLTFGVAAGEIVCLIGPSGAGKTTTLRIL
CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCEEEEEECCCCCCCCEEEEEE
LGLDTAFEGRVSGADRAGIVFQEPRLLPWRSVEHNVRLGLPRARRNRDLDDLFARLGLTA
EECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHCCCHHHHHHHHCHHH
WRTRYPKALSLGMQRRVALARALADGPRVLVLDEPFVSLDDAAAAELRGLVVDTVDRAGM
HHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHCCC
SVLMVTHNVAEAIGIADRLLLVSRRPASLIADVRLDRPRRDRDRAWAETTRANLAARHPE
EEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCH
IIAQ
HHCC
>Mature Secondary Structure 
SVAGAEPVLQVAIASKWYRPARAEPVEAVRNLTFGVAAGEIVCLIGPSGAGKTTTLRIL
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCEEEEEECCCCCCCCEEEEEE
LGLDTAFEGRVSGADRAGIVFQEPRLLPWRSVEHNVRLGLPRARRNRDLDDLFARLGLTA
EECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCHHHHCCCHHHHHHHHCHHH
WRTRYPKALSLGMQRRVALARALADGPRVLVLDEPFVSLDDAAAAELRGLVVDTVDRAGM
HHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHCCC
SVLMVTHNVAEAIGIADRLLLVSRRPASLIADVRLDRPRRDRDRAWAETTRANLAARHPE
EEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCH
IIAQ
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]