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The map label for this gene is 170748976

Identifier: 170748976

GI number: 170748976

Start: 2722533

End: 2723108

Strand: Reverse

Name: 170748976

Synonym: Mrad2831_2563

Alternate gene names: NA

Gene position: 2723108-2722533 (Counterclockwise)

Preceding gene: 170748982

Following gene: 170748975

Centisome position: 44.8

GC content: 67.01

Gene sequence:

>576_bases
ATGGTGCCGAGCACGGCCACCGGTTCGGAACTGAGACGTCTCATGGTCCTCGCCCAGTCCGGCGACGAGGCCGCCTATGC
CGACCTCCTGAACCAGGTCGCCGCCATCGCACGCGCGGTGATCCGCAACCGGGTGCGGACTTTCCAGGCGACGGACGTCG
AGGACGTCGTCCAGGACGTCCTGATGGCGATCCACATGGTCCGCGCCACCTATGACCCGGCTCGACCGTTCATGCCTTGG
CTGATGACGATCCTGCAGAGCCGGCTGGTCGACCGCCTGCGCAAGCTGCAGCGGATCGCCTCGAACGAAACCGCCGTCGA
TGCGCTGCCCGAACTTCCGCATTTCGGTCAGGACGGCTGGAGCGCCGAGGCGTACGGCGACGCGGAGCACCTCCGCCGGG
AGATCGGGGGACTTCCGGCCACGCAGAGGCGGGCCATCGAGATGCTCAAGCTGCGGGAGCTCTCCCTCAAGGAGGCATCG
GCGGAGAGCGGGCTTTCGACGGCCAACCTGAAGGTTCTGGTCCACCGCGCGATCAAGACGCTGCGTTCGAGACTGGTGGC
ATCCCATGACGCGTGA

Upstream 100 bases:

>100_bases
CGCGGCGTCCGCATTGCGCAGTAGGGATAGAGGCAACGCGGGCGGCACACGTGGTCGCGCCCGCCCGTCGAGGCCGGAAC
GAATCCAATCGGAGACGGCA

Downstream 100 bases:

>100_bases
GACCCGAGACCTTATCGCCCGTCTTTCGAACAACCTCCCGGCGGTGCGCAGCCTAGCGCCGGCACATCGACGGGCCCTGA
CCTGGCTGCTGCTCGCCGCC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma-; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-E Factor Protein; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Q Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Factor NccH; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MVPSTATGSELRRLMVLAQSGDEAAYADLLNQVAAIARAVIRNRVRTFQATDVEDVVQDVLMAIHMVRATYDPARPFMPW
LMTILQSRLVDRLRKLQRIASNETAVDALPELPHFGQDGWSAEAYGDAEHLRREIGGLPATQRRAIEMLKLRELSLKEAS
AESGLSTANLKVLVHRAIKTLRSRLVASHDA

Sequences:

>Translated_191_residues
MVPSTATGSELRRLMVLAQSGDEAAYADLLNQVAAIARAVIRNRVRTFQATDVEDVVQDVLMAIHMVRATYDPARPFMPW
LMTILQSRLVDRLRKLQRIASNETAVDALPELPHFGQDGWSAEAYGDAEHLRREIGGLPATQRRAIEMLKLRELSLKEAS
AESGLSTANLKVLVHRAIKTLRSRLVASHDA
>Mature_191_residues
MVPSTATGSELRRLMVLAQSGDEAAYADLLNQVAAIARAVIRNRVRTFQATDVEDVVQDVLMAIHMVRATYDPARPFMPW
LMTILQSRLVDRLRKLQRIASNETAVDALPELPHFGQDGWSAEAYGDAEHLRREIGGLPATQRRAIEMLKLRELSLKEAS
AESGLSTANLKVLVHRAIKTLRSRLVASHDA

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21207; Mature: 21207

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPSTATGSELRRLMVLAQSGDEAAYADLLNQVAAIARAVIRNRVRTFQATDVEDVVQDV
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMAIHMVRATYDPARPFMPWLMTILQSRLVDRLRKLQRIASNETAVDALPELPHFGQDGW
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
SAEAYGDAEHLRREIGGLPATQRRAIEMLKLRELSLKEASAESGLSTANLKVLVHRAIKT
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRSRLVASHDA
HHHHHHHHCCC
>Mature Secondary Structure
MVPSTATGSELRRLMVLAQSGDEAAYADLLNQVAAIARAVIRNRVRTFQATDVEDVVQDV
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LMAIHMVRATYDPARPFMPWLMTILQSRLVDRLRKLQRIASNETAVDALPELPHFGQDGW
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
SAEAYGDAEHLRREIGGLPATQRRAIEMLKLRELSLKEASAESGLSTANLKVLVHRAIKT
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRSRLVASHDA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA