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The map label for this gene is ureD1

Identifier: 170748887

GI number: 170748887

Start: 2629226

End: 2630092

Strand: Reverse

Name: ureD1

Synonym: Mrad2831_2469

Alternate gene names: 170748887

Gene position: 2630092-2629226 (Counterclockwise)

Preceding gene: 170748888

Following gene: 170748884

Centisome position: 43.27

GC content: 77.74

Gene sequence:

>867_bases
ATGCACGGCCCCCTCGCTCCCGCACCCTCGCCCGAGAGGCTCGGGGCCGCGCCCGCGCGCCAGCGCTCCGACGGGCGCAT
CCGGCTGCGCGTCGGGCCGGCCCGTCCGGGCGGCGGGACCCGCATCCTGGATCTCGCGGAAGCCGGGCCGTCGCGTCTGC
GCTTCCCGCGGGGGACCTGCGCGCTGGAGGCGGTCCTCGTCAACACGGCGGGCGGCGTGGCCTGCGGCGACAGCTTCGCC
ATCGACCTCGCCCTGGAACCGGGGGCCGACCTGGTGCTGACCACCACGGCGGCCGAGAAGATCTACCGCTCGGACGGCCC
CGTGAGCCGCATCGCCAACACCCTGACCCTCGGGGAGGGGGCCGGCCTCGCCTGGCTGCCGCAGGAGACGATCCTGTTCG
ATCGGGCCCGGGTGCGGCGGCGCTTCGAGGCCGATCTCGCCGACGGCGCCGCGCTGATCGCCGCGGAGGTCGTCGCGTTC
GGCCGCGCCGCCCGGGGCGAGCGGATCGTCGACGGTCTGTTCGCGGATTCCTGGCGGATCCGCCGAGGCGGGCGGCTCGC
CTACGCCGACAGCGTCCTGCTGGAGGGGCCGATCAGCGACCACCTCGCCCGCCCGGCCATCGGCGGCGGCGCCCGCGCCT
GCGCGACGATCCTCGACGTCTCGCCCGGCGCGGAAGCGCGCCTCGAGGAGGCGCGGGCCCGTCTGGCCGAGGCCGCCTCG
CCCGGAACGACGGCGGCGGCGAGCGCCTGGAACGGCCATCTGGCGGTCCGCGCGCTGGGGGACGCGGTCGGACCCCTGCG
CGGGCTCGTCGCCCGCTTCCTCGCGGGCTACCGGGCCCTGCCGATGCCCCGGGTCTGGCAGAGCTGA

Upstream 100 bases:

>100_bases
TCTTGGTCGAGCTGGTGGCGAGCCTGTTCGGCCGGCGCATCCTCGACCGGCCGACCGGGCCGATCGAGGCCGTGGCCGCA
GAGCCGGCCGGACGCGCCTG

Downstream 100 bases:

>100_bases
CGCGGTCCGCACAATCGGGGCCTCGGGGCCGTTGCCTGCGACCGCCGACCTCTGCTAGAGACGCGCACCCGGAGCTGTCC
GCCAAGCTCCGGACGGGACG

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MHGPLAPAPSPERLGAAPARQRSDGRIRLRVGPARPGGGTRILDLAEAGPSRLRFPRGTCALEAVLVNTAGGVACGDSFA
IDLALEPGADLVLTTTAAEKIYRSDGPVSRIANTLTLGEGAGLAWLPQETILFDRARVRRRFEADLADGAALIAAEVVAF
GRAARGERIVDGLFADSWRIRRGGRLAYADSVLLEGPISDHLARPAIGGGARACATILDVSPGAEARLEEARARLAEAAS
PGTTAAASAWNGHLAVRALGDAVGPLRGLVARFLAGYRALPMPRVWQS

Sequences:

>Translated_288_residues
MHGPLAPAPSPERLGAAPARQRSDGRIRLRVGPARPGGGTRILDLAEAGPSRLRFPRGTCALEAVLVNTAGGVACGDSFA
IDLALEPGADLVLTTTAAEKIYRSDGPVSRIANTLTLGEGAGLAWLPQETILFDRARVRRRFEADLADGAALIAAEVVAF
GRAARGERIVDGLFADSWRIRRGGRLAYADSVLLEGPISDHLARPAIGGGARACATILDVSPGAEARLEEARARLAEAAS
PGTTAAASAWNGHLAVRALGDAVGPLRGLVARFLAGYRALPMPRVWQS
>Mature_288_residues
MHGPLAPAPSPERLGAAPARQRSDGRIRLRVGPARPGGGTRILDLAEAGPSRLRFPRGTCALEAVLVNTAGGVACGDSFA
IDLALEPGADLVLTTTAAEKIYRSDGPVSRIANTLTLGEGAGLAWLPQETILFDRARVRRRFEADLADGAALIAAEVVAF
GRAARGERIVDGLFADSWRIRRGGRLAYADSVLLEGPISDHLARPAIGGGARACATILDVSPGAEARLEEARARLAEAAS
PGTTAAASAWNGHLAVRALGDAVGPLRGLVARFLAGYRALPMPRVWQS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED1_METRJ (B1LZY1)

Other databases:

- EMBL:   CP001001
- RefSeq:   YP_001755147.1
- GeneID:   6138511
- GenomeReviews:   CP001001_GR
- KEGG:   mrd:Mrad2831_2469
- HOGENOM:   HBG711156
- OMA:   QETILFD
- ProtClustDB:   CLSK980186
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 29969; Mature: 29969

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGPLAPAPSPERLGAAPARQRSDGRIRLRVGPARPGGGTRILDLAEAGPSRLRFPRGTC
CCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHCCCCCCHH
ALEAVLVNTAGGVACGDSFAIDLALEPGADLVLTTTAAEKIYRSDGPVSRIANTLTLGEG
EEEEEEEECCCCEEECCCEEEEEEECCCCCEEEEEHHHHHHHHCCCCHHHHHHHHEECCC
AGLAWLPQETILFDRARVRRRFEADLADGAALIAAEVVAFGRAARGERIVDGLFADSWRI
CCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEE
RRGGRLAYADSVLLEGPISDHLARPAIGGGARACATILDVSPGAEARLEEARARLAEAAS
CCCCEEEEECCEEEECCHHHHHCCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHCCC
PGTTAAASAWNGHLAVRALGDAVGPLRGLVARFLAGYRALPMPRVWQS
CCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure
MHGPLAPAPSPERLGAAPARQRSDGRIRLRVGPARPGGGTRILDLAEAGPSRLRFPRGTC
CCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCHHHCCCCCCHH
ALEAVLVNTAGGVACGDSFAIDLALEPGADLVLTTTAAEKIYRSDGPVSRIANTLTLGEG
EEEEEEEECCCCEEECCCEEEEEEECCCCCEEEEEHHHHHHHHCCCCHHHHHHHHEECCC
AGLAWLPQETILFDRARVRRRFEADLADGAALIAAEVVAFGRAARGERIVDGLFADSWRI
CCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEE
RRGGRLAYADSVLLEGPISDHLARPAIGGGARACATILDVSPGAEARLEEARARLAEAAS
CCCCEEEEECCEEEECCHHHHHCCCCCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHCCC
PGTTAAASAWNGHLAVRALGDAVGPLRGLVARFLAGYRALPMPRVWQS
CCCCHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA